Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 2.4e-75 285.4 143 100.0
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 4.7e-23 111.7 114 47.4
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.2e-21 107.1 109 51.4
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 6.4e-20 101.3 119 47.9
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 4.1e-19 98.6 97 49.5
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 7.0e-19 97.8 110 48.2
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 7.0e-19 97.8 119 42.9
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 9.2e-19 97.4 116 45.7
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 1.2e-18 97.1 116 46.6
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 3.5e-18 95.5 117 43.6
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 3.5e-18 95.5 116 45.7
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 4.6e-18 95.1 158 38.0
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 4.6e-18 95.1 119 42.9
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 4.6e-18 95.1 118 46.6
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 6.0e-18 94.7 116 45.7
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 7.8e-18 94.4 120 45.8
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 7.8e-18 94.4 109 45.9
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 1.0e-17 94.0 188 34.0
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 1.0e-17 94.0 116 45.7
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 1.0e-17 94.0 115 45.2
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 2.3e-17 92.8 121 43.8
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.3e-17 92.8 116 45.7
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 3.0e-17 92.4 123 42.3
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 3.0e-17 92.4 116 44.8
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 3.0e-17 92.4 104 41.3
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 3.0e-17 92.4 122 45.1
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 3.9e-17 92.0 181 32.6
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 5.0e-17 91.7 120 45.0
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 5.0e-17 91.7 133 41.4
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 5.0e-17 91.7 133 41.4
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 5.0e-17 91.7 116 44.0
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 5.0e-17 91.7 167 34.7
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 5.0e-17 91.7 118 43.2
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 6.6e-17 91.3 123 42.3
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 6.6e-17 91.3 185 33.5
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 6.6e-17 91.3 115 42.6
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 1.1e-16 90.5 119 43.7
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 1.1e-16 90.5 115 45.2
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 1.1e-16 90.5 119 42.0
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 1.1e-16 90.5 116 45.7
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 1.1e-16 90.5 115 44.3
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 1.5e-16 90.1 120 43.3
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 1.5e-16 90.1 120 40.0
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 1.5e-16 90.1 120 42.5
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 1.9e-16 89.7 119 44.5
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.9e-16 89.7 115 43.5
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 1.9e-16 89.7 115 44.3
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 2.5e-16 89.4 104 46.2
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 2.5e-16 89.4 175 37.1
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 2.5e-16 89.4 92 48.9
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 2.5e-16 89.4 119 44.5
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 2.5e-16 89.4 120 40.8
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 2.5e-16 89.4 121 43.0
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 3.3e-16 89.0 120 45.0
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 3.3e-16 89.0 119 44.5
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 4.3e-16 88.6 120 43.3
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 5.6e-16 88.2 184 34.8
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 5.6e-16 88.2 119 43.7
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 5.6e-16 88.2 116 43.1
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 5.6e-16 88.2 116 44.8
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 7.3e-16 87.8 119 43.7
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 7.3e-16 87.8 94 44.7
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 7.3e-16 87.8 118 43.2
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 7.3e-16 87.8 119 43.7
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 1.6e-15 86.7 116 40.5
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 1.6e-15 86.7 111 43.2
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 2.1e-15 86.3 120 40.8
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 2.1e-15 86.3 109 42.2
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 2.1e-15 86.3 116 42.2
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.8e-15 85.9 97 40.2
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 2.8e-15 85.9 118 43.2
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 2.8e-15 85.9 117 41.0
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 2.8e-15 85.9 171 34.5
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 3.6e-15 85.5 94 45.7
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 8.1e-15 84.3 123 43.9
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 1.4e-14 83.6 108 41.7
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 2.3e-14 82.8 115 41.7
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 3.1e-14 82.4 119 40.3
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 4.0e-14 82.0 91 46.2
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 5.2e-14 81.6 115 41.7
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 1.2e-13 80.5 119 38.7
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 2.0e-13 79.7 119 43.7
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 2.0e-13 79.7 122 37.7
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 2.6e-13 79.3 152 36.8
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 2.6e-13 79.3 117 41.0
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 2.6e-13 79.3 120 39.2
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 2.6e-13 79.3 133 38.3
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 3.4e-13 79.0 115 42.6
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 3.4e-13 79.0 119 42.0
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 5.8e-13 78.2 161 31.7
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 9.9e-13 77.4 78 46.2
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 2.2e-12 76.3 149 34.9
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 1.1e-11 73.9 211 29.4
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 1.1e-11 73.9 135 36.3
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 2.4e-11 72.8 92 39.1
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 2.4e-11 72.8 86 40.7
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 4.1e-11 72.0 81 45.7
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 5.4e-11 71.6 120 35.0
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 9.2e-11 70.9 94 42.6
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 1.0e-09 67.4 111 37.8
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 5.6e-08 61.6 146 34.2
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 4.7e-07 58.5 80 38.8


User provided reference genes

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