Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34084 Sequoiadendron giganteum HOM05D002626 ORTHO05D002749 1.4e-69 266.2 135 100.0
SEGI_31051 Sequoiadendron giganteum HOM05D002626 ORTHO05D002749 2.0e-31 139.4 87 77.0
SEGI_28940 Sequoiadendron giganteum HOM05D002626 ORTHO05D002749 4.8e-25 118.2 78 79.5
CANSAT78G2302 Cannabis sativa HOM05D002626 ORTHO05D002749 1.9e-18 96.3 118 50.0
Aqoxy5G00555 Aquilegia oxysepala HOM05D002626 ORTHO05D002749 4.3e-18 95.1 78 61.5
Phvul.006G157500 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 9.6e-18 94.0 83 56.6
Nn4g26139 Nelumbo nucifera HOM05D002626 ORTHO05D002749 2.1e-17 92.8 78 57.7
Dinv44463 Davidia involucrata HOM05D002626 ORTHO05D002749 2.8e-17 92.4 97 52.6
Lalb_Chr18g0055961 Lupinus albus HOM05D002626 ORTHO05D002749 2.8e-17 92.4 83 56.6
MELO3C006579.2 Cucumis melo HOM05D002626 ORTHO05D002749 3.6e-17 92.0 107 48.6
CSS0004520 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 4.8e-17 91.7 78 59.0
Sed0019043 Sechium edule HOM05D002626 ORTHO05D002749 4.8e-17 91.7 92 53.3
CDE09G1249 Ceratophyllum demersum HOM05D002626 ORTHO05D002749 8.1e-17 90.9 78 55.1
Eucgr.H03637 Eucalyptus grandis HOM05D002626 ORTHO05D002749 1.1e-16 90.5 78 59.0
Glyma.13G211400 Glycine max HOM05D002626 ORTHO05D002749 1.4e-16 90.1 82 56.1
MD13G1179500 Malus domestica HOM05D002626 ORTHO05D002749 1.4e-16 90.1 78 59.0
CDE02G0849 Ceratophyllum demersum HOM05D002626 ORTHO05D002749 1.8e-16 89.7 78 55.1
Lj6g0010477 Lotus japonicus HOM05D002626 ORTHO05D002749 2.4e-16 89.4 83 54.2
VMungo0540G2474 Vigna mungo HOM05D002626 ORTHO05D002749 2.4e-16 89.4 83 54.2
MBI17_g26039_MAGBIO Magnolia biondii HOM05D002626 ORTHO05D002749 3.1e-16 89.0 85 51.8
CsaV3_3G013870 Cucumis sativus L. HOM05D002626 ORTHO05D002749 4.0e-16 88.6 92 53.3
Thhalv10025468m.g Eutrema salsugineum HOM05D002626 ORTHO05D002749 4.0e-16 88.6 78 59.0
Glyma.15G101300 Glycine max HOM05D002626 ORTHO05D002749 4.0e-16 88.6 83 55.4
Cfa015547 Carpinus fangiana HOM05D002626 ORTHO05D002749 5.3e-16 88.2 78 56.4
Medtr2g021070 Medicago truncatula HOM05D002626 ORTHO05D002749 5.3e-16 88.2 78 57.7
Cpa.g.sc16.59 Carica papaya HOM05D002626 ORTHO05D002749 9.0e-16 87.4 78 57.7
Hma1.2p1_0643F.1_g194410 Hydrangea macrophylla HOM05D002626 ORTHO05D002749 1.2e-15 87.0 83 55.4
PGR004G1768 Punica granatum HOM05D002626 ORTHO05D002749 1.2e-15 87.0 78 57.7
PGR065G0005 Punica granatum HOM05D002626 ORTHO05D002749 1.2e-15 87.0 78 57.7
Sp7g10530 Schrenkiella parvula HOM05D002626 ORTHO05D002749 1.2e-15 87.0 78 56.4
ATR0626G216 Amborella trichopoda HOM05D002626 ORTHO05D002749 1.5e-15 86.7 73 58.9
Haze_01001 Corylus avellana HOM05D002626 ORTHO05D002749 1.5e-15 86.7 78 57.7
THA.LOC104802739 Tarenaya hassleriana HOM05D002626 ORTHO05D002749 1.5e-15 86.7 78 57.7
Prupe.1G148100 Prunus persica HOM05D002626 ORTHO05D002749 2.0e-15 86.3 78 56.4
Dinv38357 Davidia involucrata HOM05D002626 ORTHO05D002749 2.6e-15 85.9 83 55.4
Lsat_1_v5_gn_3_24921 Lactuca sativa HOM05D002626 ORTHO05D002749 2.6e-15 85.9 90 52.2
TAR362G1114 Trochodendron aralioides HOM05D002626 ORTHO05D002749 2.6e-15 85.9 78 53.8
Psat1g185240 Pisum sativum HOM05D002626 ORTHO05D002749 3.4e-15 85.5 117 41.9
TPR.G18027 Trifolium pratense HOM05D002626 ORTHO05D002749 3.4e-15 85.5 78 56.4
Ca_00596_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 4.5e-15 85.1 88 51.1
Peaxi162Scf00095g00072 Petunia axillaris HOM05D002626 ORTHO05D002749 4.5e-15 85.1 74 59.5
Nn1g02101 Nelumbo nucifera HOM05D002626 ORTHO05D002749 5.8e-15 84.7 78 52.6
Aqoxy2G03206 Aquilegia oxysepala HOM05D002626 ORTHO05D002749 7.6e-15 84.3 78 55.1
Rhsim02G0017100 Rhododendron simsii HOM05D002626 ORTHO05D002749 7.6e-15 84.3 78 55.1
A04p08920 Brassica napus HOM05D002626 ORTHO05D002749 9.9e-15 84.0 95 45.3
MD16G1180600 Malus domestica HOM05D002626 ORTHO05D002749 9.9e-15 84.0 78 56.4
Nitab4.5_0000059g0080 Nicotiana tabacum HOM05D002626 ORTHO05D002749 9.9e-15 84.0 74 59.5
TAR365G0050 Trochodendron aralioides HOM05D002626 ORTHO05D002749 9.9e-15 84.0 74 56.8
vmacro15291 Vaccinium macrocarpon HOM05D002626 ORTHO05D002749 9.9e-15 84.0 78 55.1
BraA04t16588Z Brassica rapa HOM05D002626 ORTHO05D002749 1.3e-14 83.6 78 53.8
Nitab4.5_0000535g0150 Nicotiana tabacum HOM05D002626 ORTHO05D002749 1.3e-14 83.6 83 54.2
arahy.Tifrunner.gnm1.ann1.WS6KBW Arachis hypogaea HOM05D002626 ORTHO05D002749 1.7e-14 83.2 78 52.6
arahy.Tifrunner.gnm1.ann1.YGA72Z Arachis hypogaea HOM05D002626 ORTHO05D002749 1.7e-14 83.2 78 52.6
Manes.03G187300 Manihot esculenta HOM05D002626 ORTHO05D002749 1.7e-14 83.2 80 55.0
BcaC02g09444 Brassica carinata HOM05D002626 ORTHO05D002749 2.2e-14 82.8 78 52.6
C04p42810 Brassica napus HOM05D002626 ORTHO05D002749 2.2e-14 82.8 78 52.6
BolC4t25847H Brassica oleracea HOM05D002626 ORTHO05D002749 2.2e-14 82.8 78 52.6
PSO170G6443 Papaver somniferum HOM05D002626 ORTHO05D002749 2.2e-14 82.8 78 51.3
PSO407G0431 Papaver somniferum HOM05D002626 ORTHO05D002749 2.2e-14 82.8 78 51.3
QL06p005999 Quercus lobata HOM05D002626 ORTHO05D002749 2.9e-14 82.4 78 53.8
Aa31LG9G4790 Aethionema arabicum HOM05D002626 ORTHO05D002749 3.8e-14 82.0 78 53.8
DCAR_030584 Daucus carota HOM05D002626 ORTHO05D002749 3.8e-14 82.0 74 52.7
Atru.chr4.2691 Acer truncatum HOM05D002626 ORTHO05D002749 4.9e-14 81.6 76 55.3
FAN07G1094 Fragaria x ananassa HOM05D002626 ORTHO05D002749 4.9e-14 81.6 78 55.1
TWI73G0323 Tripterygium wilfordii HOM05D002626 ORTHO05D002749 4.9e-14 81.6 78 53.8
HPP92_025236 Vanilla planifolia HOM05D002626 ORTHO05D002749 4.9e-14 81.6 76 52.6
Mapoly0057s0070 Marchantia polymorpha HOM05D002626 ORTHO05D002749 8.4e-14 80.9 77 50.6
Dinv11263 Davidia involucrata HOM05D002626 ORTHO05D002749 1.1e-13 80.5 73 57.5
FvH4_4g14080 Fragaria vesca HOM05D002626 ORTHO05D002749 1.1e-13 80.5 78 53.8
FAN12G3398 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.1e-13 80.5 78 53.8
FAN17G1882 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.9e-13 79.7 78 53.8
Duzib212G0333 Durio zibethinus HOM05D002626 ORTHO05D002749 2.4e-13 79.3 78 55.1
Gohir.A09G231500 Gossypium hirsutum HOM05D002626 ORTHO05D002749 3.2e-13 79.0 84 50.0
PSO210G5367 Papaver somniferum HOM05D002626 ORTHO05D002749 3.2e-13 79.0 76 57.9
PSO832G2564 Papaver somniferum HOM05D002626 ORTHO05D002749 3.2e-13 79.0 76 57.9
RcHm_v2.0_Chr4g0419271 Rosa chinensis HOM05D002626 ORTHO05D002749 3.2e-13 79.0 78 52.6
Gohir.D09G232600 Gossypium hirsutum HOM05D002626 ORTHO05D002749 5.5e-13 78.2 83 50.6
Gorai.006G255500 Gossypium raimondii HOM05D002626 ORTHO05D002749 5.5e-13 78.2 83 50.6
Solyc01g080340.3 Solanum lycopersicum HOM05D002626 ORTHO05D002749 5.5e-13 78.2 83 50.6
Sopen01g032140 Solanum pennellii HOM05D002626 ORTHO05D002749 5.5e-13 78.2 83 50.6
PGSC0003DMG400012765 Solanum tuberosum HOM05D002626 ORTHO05D002749 5.5e-13 78.2 83 50.6
Cc01_g19870 Coffea canephora HOM05D002626 ORTHO05D002749 7.1e-13 77.8 72 55.6
MBI19_g39901_MAGBIO Magnolia biondii HOM05D002626 ORTHO05D002749 7.1e-13 77.8 78 51.3
HanXRQChr15g0466621 Helianthus annuus HOM05D002626 ORTHO05D002749 9.3e-13 77.4 99 43.4
Lj2P1180T46 Lonicera japonica HOM05D002626 ORTHO05D002749 1.6e-12 76.6 72 52.8
Duzib151G1123 Durio zibethinus HOM05D002626 ORTHO05D002749 2.1e-12 76.3 78 53.8
Sopen09g028880 Solanum pennellii HOM05D002626 ORTHO05D002749 2.1e-12 76.3 99 46.5
AT4G13110 Arabidopsis thaliana HOM05D002626 ORTHO05D002749 2.7e-12 75.9 78 53.8
Gohir.A02G044500 Gossypium hirsutum HOM05D002626 ORTHO05D002749 3.5e-12 75.5 83 50.6
Sabra08G0161600 Salix brachista HOM05D002626 ORTHO05D002749 3.5e-12 75.5 80 46.2
Solyc09g074060.3 Solanum lycopersicum HOM05D002626 ORTHO05D002749 3.5e-12 75.5 81 51.9
PGSC0003DMG400003842 Solanum tuberosum HOM05D002626 ORTHO05D002749 3.5e-12 75.5 81 51.9
Thecc.04G271100 Theobroma cacao HOM05D002626 ORTHO05D002749 3.5e-12 75.5 78 51.3
Carub.0007s2960 Capsella rubella HOM05D002626 ORTHO05D002749 4.6e-12 75.1 78 51.3
Oeu006225.1 Olea europaea HOM05D002626 ORTHO05D002749 4.6e-12 75.1 72 51.4
Oeu047888.1 Olea europaea HOM05D002626 ORTHO05D002749 6.0e-12 74.7 72 52.8
Migut.N02142 Erythranthe guttata HOM05D002626 ORTHO05D002749 7.9e-12 74.3 82 51.2
Gohir.D02G050400 Gossypium hirsutum HOM05D002626 ORTHO05D002749 1.0e-11 73.9 83 49.4
unitig_21.g20289 Utricularia gibba HOM05D002626 ORTHO05D002749 1.0e-11 73.9 72 56.9
Migut.N02171 Erythranthe guttata HOM05D002626 ORTHO05D002749 1.3e-11 73.6 69 55.1
AL9U10970 Arabidopsis lyrata HOM05D002626 ORTHO05D002749 1.8e-11 73.2 78 50.0
Ciclev10005126m.g Citrus clementina HOM05D002626 ORTHO05D002749 1.8e-11 73.2 70 54.3
SalBow2G1774 Salvia bowleyana HOM05D002626 ORTHO05D002749 1.8e-11 73.2 74 50.0
SalBow2G2417 Salvia bowleyana HOM05D002626 ORTHO05D002749 1.8e-11 73.2 74 50.0
MSTRG.18208 Avicennia marina HOM05D002626 ORTHO05D002749 2.3e-11 72.8 110 41.8
Sc19g0004690 Simmondsia chinensis HOM05D002626 ORTHO05D002749 2.3e-11 72.8 78 43.6
Cc03_g02830 Coffea canephora HOM05D002626 ORTHO05D002749 3.0e-11 72.4 72 51.4
Lsat_1_v5_gn_5_187601 Lactuca sativa HOM05D002626 ORTHO05D002749 3.0e-11 72.4 70 57.1
Pp3c1_21290 Physcomitrium patens HOM05D002626 ORTHO05D002749 3.0e-11 72.4 78 47.4
Potri.008G199000 Populus trichocarpa HOM05D002626 ORTHO05D002749 3.0e-11 72.4 78 44.9
unitig_744.g24486 Utricularia gibba HOM05D002626 ORTHO05D002749 3.0e-11 72.4 81 51.9
COL.COLO4_13981 Corchorus olitorius HOM05D002626 ORTHO05D002749 3.9e-11 72.0 84 46.4
SGA_v2.0_scaffold142G35623 Striga asiatica HOM05D002626 ORTHO05D002749 3.9e-11 72.0 74 50.0
SMO174G0142 Selaginella moellendorffii HOM05D002626 ORTHO05D002749 5.1e-11 71.6 73 50.7
ECA246G4466 Erigeron canadensis HOM05D002626 ORTHO05D002749 6.7e-11 71.2 74 48.6
Lsat_1_v5_gn_9_4601 Lactuca sativa HOM05D002626 ORTHO05D002749 6.7e-11 71.2 89 44.9
Oeu027127.1 Olea europaea HOM05D002626 ORTHO05D002749 6.7e-11 71.2 89 43.8
Pp3c2_17090 Physcomitrium patens HOM05D002626 ORTHO05D002749 6.7e-11 71.2 78 44.9
Migut.D00253 Erythranthe guttata HOM05D002626 ORTHO05D002749 8.7e-11 70.9 77 49.4
Migut.G00248 Erythranthe guttata HOM05D002626 ORTHO05D002749 8.7e-11 70.9 74 48.6
Gorai.005G055700 Gossypium raimondii HOM05D002626 ORTHO05D002749 1.1e-10 70.5 83 48.2
Oeu021629.1 Olea europaea HOM05D002626 ORTHO05D002749 1.1e-10 70.5 73 49.3
Nitab4.5_0001323g0090 Nicotiana tabacum HOM05D002626 ORTHO05D002749 1.5e-10 70.1 69 53.6
Peaxi162Scf00941g00038 Petunia axillaris HOM05D002626 ORTHO05D002749 1.5e-10 70.1 69 52.2
Ah.06g192170 Amaranthus hybridus HOM05D002626 ORTHO05D002749 1.9e-10 69.7 76 50.0
CARHR218610 Cardamine hirsuta HOM05D002626 ORTHO05D002749 2.5e-10 69.3 78 48.7
Nitab4.5_0005725g0010 Nicotiana tabacum HOM05D002626 ORTHO05D002749 2.5e-10 69.3 69 53.6
HanXRQChr01g0003231 Helianthus annuus HOM05D002626 ORTHO05D002749 3.3e-10 68.9 71 53.5
MSTRG.12573 Avicennia marina HOM05D002626 ORTHO05D002749 5.6e-10 68.2 68 52.9
CAN.G956.7 Capsicum annuum HOM05D002626 ORTHO05D002749 5.6e-10 68.2 76 46.1
SalBow6G5527 Salvia bowleyana HOM05D002626 ORTHO05D002749 5.6e-10 68.2 71 50.7
TAR633G1787 Trochodendron aralioides HOM05D002626 ORTHO05D002749 7.4e-10 67.8 78 44.9
MBI17_g29026_MAGBIO Magnolia biondii HOM05D002626 ORTHO05D002749 1.3e-09 67.0 59 55.9
Potri.010G028801 Populus trichocarpa HOM05D002626 ORTHO05D002749 1.3e-09 67.0 67 49.3
EL10Ac4g09103 Beta vulgaris HOM05D002626 ORTHO05D002749 1.6e-09 66.6 76 48.7
Zm00001eb128590 Zea mays HOM05D002626 ORTHO05D002749 1.6e-09 66.6 85 40.0
Lj3P805T49 Lonicera japonica HOM05D002626 ORTHO05D002749 2.1e-09 66.2 72 48.6
Potri.008G199100 Populus trichocarpa HOM05D002626 ORTHO05D002749 2.1e-09 66.2 67 50.7
AUR62001037 Chenopodium quinoa HOM05D002626 ORTHO05D002749 3.7e-09 65.5 76 48.7
AUR62004919 Chenopodium quinoa HOM05D002626 ORTHO05D002749 3.7e-09 65.5 76 48.7
Sabra08G0161500 Salix brachista HOM05D002626 ORTHO05D002749 6.2e-09 64.7 65 53.8
ECA247G1500 Erigeron canadensis HOM05D002626 ORTHO05D002749 1.4e-08 63.5 76 47.4
ECA248G1841 Erigeron canadensis HOM05D002626 ORTHO05D002749 1.4e-08 63.5 69 52.2
SGA_v2.0_scaffold1G00439 Striga asiatica HOM05D002626 ORTHO05D002749 3.1e-08 62.4 85 48.2
DCAR_016344 Daucus carota HOM05D002626 ORTHO05D002749 4.0e-08 62.0 54 51.9
Os07g0647400 Oryza sativa ssp. japonica HOM05D002626 ORTHO05D002749 5.3e-08 61.6 49 59.2
Rhsim13G0021700 Rhododendron simsii HOM05D002626 ORTHO05D002749 9.0e-08 60.8 54 51.9
CiPaw.02G089900 Carya illinoinensis HOM05D002626 ORTHO05D002749 1.5e-07 60.1 56 53.6
Ca_08557_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 1.5e-07 60.1 78 42.3
Ca_08591_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 1.5e-07 60.1 78 42.3
Psat3g066280 Pisum sativum HOM05D002626 ORTHO05D002749 1.5e-07 60.1 118 36.4
unitig_26.g8939 Utricularia gibba HOM05D002626 ORTHO05D002749 2.0e-07 59.7 68 42.6
vmacro02541 Vaccinium macrocarpon HOM05D000488 ORTHO05D002749 2.0e-07 59.7 71 45.1
Zm00001eb329400 Zea mays HOM05D002626 ORTHO05D002749 2.0e-07 59.7 49 57.1
Lalb_Chr06g0163161 Lupinus albus HOM05D002626 ORTHO05D002749 2.6e-07 59.3 78 43.6
Glyma.02G150000 Glycine max HOM05D002626 ORTHO05D002749 3.4e-07 58.9 78 44.9
Medtr7g094240 Medicago truncatula HOM05D002626 ORTHO05D002749 3.4e-07 58.9 114 36.0
Sc05g0005160 Simmondsia chinensis HOM05D002626 ORTHO05D002749 3.4e-07 58.9 54 53.7
Glyma.10G023800 Glycine max HOM05D002626 ORTHO05D002749 7.6e-07 57.8 78 43.6
Os01g0273300 Oryza sativa ssp. japonica HOM05D002626 ORTHO05D002749 7.6e-07 57.8 85 32.9
CiPaw.01G157700 Carya illinoinensis HOM05D002626 ORTHO05D002749 1.3e-06 57.0 78 42.3
Phvul.007G168800 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 1.3e-06 57.0 86 40.7
Lj5g0004574 Lotus japonicus HOM05D002626 ORTHO05D002749 1.7e-06 56.6 87 43.7
Lalb_Chr21g0306611 Lupinus albus HOM05D002626 ORTHO05D002749 1.7e-06 56.6 78 42.3
unitig_749.g14061 Utricularia gibba HOM05D002626 ORTHO05D002749 1.7e-06 56.6 79 39.2
Actinidia24313 Actinidia chinensis HOM05D002626 ORTHO05D002749 2.2e-06 56.2 56 53.6
VMungo0720G1093 Vigna mungo HOM05D002626 ORTHO05D002749 2.2e-06 56.2 78 42.3
MD03G1271200 Malus domestica HOM05D002626 ORTHO05D002749 2.9e-06 55.8 78 42.3
Prupe.8G247300 Prunus persica HOM05D002626 ORTHO05D002749 2.9e-06 55.8 77 42.9
Lsat_1_v5_gn_8_2480 Lactuca sativa HOM05D002556 ORTHO05D003153 3.8e-06 55.5 73 41.1
GSVIVG01017862001 Vitis vinifera HOM05D002626 ORTHO05D002749 6.5e-06 54.7 44 59.1
Ciclev10020022m.g Citrus clementina HOM05D002626 ORTHO05D002749 8.4e-06 54.3 78 43.6


User provided reference genes

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