Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33986 Sequoiadendron giganteum HOM05D004779 ORTHO05D005737 1.1e-137 493.4 274 100.0
Nn2g14463 Nelumbo nucifera HOM05D004779 ORTHO05D005737 1.3e-32 144.4 243 42.0
TAR369G0205 Trochodendron aralioides HOM05D004779 ORTHO05D005737 2.2e-29 133.7 240 42.1
ATR0697G120 Amborella trichopoda HOM05D004779 ORTHO05D005737 2.9e-29 133.3 241 39.4
RcHm_v2.0_Chr5g0049381 Rosa chinensis HOM05D004779 ORTHO05D005737 5.5e-28 129.0 247 40.5
MD11G1177500 Malus domestica HOM05D004779 ORTHO05D005737 7.1e-28 128.6 253 38.3
Duzib170G1005 Durio zibethinus HOM05D004779 ORTHO05D005737 9.3e-28 128.3 259 38.2
Aqoxy1G00564 Aquilegia oxysepala HOM05D004779 ORTHO05D005737 2.3e-26 123.6 248 39.1
Rhsim13G0199300 Rhododendron simsii HOM05D004779 ORTHO05D005737 2.3e-26 123.6 250 40.0
MD03G1161400 Malus domestica HOM05D004779 ORTHO05D005737 3.0e-26 123.2 241 39.0
arahy.Tifrunner.gnm1.ann1.3IJ79N Arachis hypogaea HOM05D004779 ORTHO05D005737 3.9e-26 122.9 245 37.6
Hund20969 Selenicereus undatus HOM05D004779 ORTHO05D005737 3.9e-26 122.9 251 39.4
Ca_06128_v3 Cicer arietinum L. HOM05D004779 ORTHO05D005737 6.7e-26 122.1 247 38.9
Dinv32142 Davidia involucrata HOM05D004779 ORTHO05D005737 1.1e-25 121.3 248 37.9
Glyma.14G044700 Glycine max HOM05D004779 ORTHO05D005737 1.1e-25 121.3 249 37.8
Sopen11g029350 Solanum pennellii HOM05D004779 ORTHO05D005737 1.1e-25 121.3 244 39.3
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 3.3e-25 119.8 262 36.3
Glyma.02G271700 Glycine max HOM05D004779 ORTHO05D005737 4.3e-25 119.4 249 37.8
AUR62020193 Chenopodium quinoa HOM05D004779 ORTHO05D005737 7.4e-25 118.6 261 37.9
CANSAT54G2495 Cannabis sativa HOM05D004779 ORTHO05D005737 9.7e-25 118.2 258 36.8
FAN21G0778 Fragaria x ananassa HOM05D011291 ORTHO05D005737 9.7e-25 118.2 250 39.2
Sc06g0008600 Simmondsia chinensis HOM05D004779 ORTHO05D005737 9.7e-25 118.2 253 39.9
FvH4_3g26940 Fragaria vesca HOM05D004779 ORTHO05D005737 1.3e-24 117.9 251 40.6
Phvul.008G210200 Phaseolus vulgaris HOM05D004779 ORTHO05D005737 1.6e-24 117.5 249 38.6
FAN16G1882 Fragaria x ananassa HOM05D004779 ORTHO05D005737 2.8e-24 116.7 251 37.8
arahy.Tifrunner.gnm1.ann1.GQ8P42 Arachis hypogaea HOM05D004779 ORTHO05D005737 3.7e-24 116.3 245 37.1
CSS0005993 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 3.7e-24 116.3 249 38.2
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 3.7e-24 116.3 249 38.2
MELO3C017381.2 Cucumis melo HOM05D004779 ORTHO05D005737 3.7e-24 116.3 251 37.8
Lalb_Chr04g0249841 Lupinus albus HOM05D004779 ORTHO05D005737 4.8e-24 115.9 247 37.2
Solyc11g071680.2 Solanum lycopersicum HOM05D004779 ORTHO05D005737 4.8e-24 115.9 244 37.3
VMungo0647G2327 Vigna mungo HOM05D004779 ORTHO05D005737 4.8e-24 115.9 249 38.6
GSVIVG01037513001 Vitis vinifera HOM05D004779 ORTHO05D005737 1.1e-23 114.8 248 36.7
Psat2g023720 Pisum sativum HOM05D004779 ORTHO05D005737 2.4e-23 113.6 247 36.0
PSO339G0772 Papaver somniferum HOM05D004779 ORTHO05D005737 3.1e-23 113.2 243 39.5
Sed0007784 Sechium edule HOM05D004779 ORTHO05D005737 3.1e-23 113.2 252 36.9
ClCG06G014140 Citrullus lanatus HOM05D004779 ORTHO05D005737 4.1e-23 112.8 249 36.5
FAN11G2927 Fragaria x ananassa HOM05D004779 ORTHO05D005737 4.1e-23 112.8 250 38.4
Lj2g0019509 Lotus japonicus HOM05D004779 ORTHO05D005737 9.0e-23 111.7 247 36.8
Medtr5g086790 Medicago truncatula HOM05D004779 ORTHO05D005737 9.0e-23 111.7 248 37.9
TPR.G13298 Trifolium pratense HOM05D004779 ORTHO05D005737 9.0e-23 111.7 250 37.6
CDE05G1310 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 1.2e-22 111.3 243 37.0
FAN25G2723 Fragaria x ananassa HOM05D004779 ORTHO05D005737 1.2e-22 111.3 252 37.7
Sed0027738 Sechium edule HOM05D004779 ORTHO05D005737 1.2e-22 111.3 251 36.7
Gohir.A13G221700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.5e-22 110.9 258 36.0
Hma1.2p1_0218F.1_g092300 Hydrangea macrophylla HOM05D004779 ORTHO05D005737 1.5e-22 110.9 243 37.9
Lalb_Chr10g0105761 Lupinus albus HOM05D004779 ORTHO05D005737 4.5e-22 109.4 247 35.6
Thecc.09G267300 Theobroma cacao HOM05D004779 ORTHO05D005737 4.5e-22 109.4 264 34.8
vmacro04059 Vaccinium macrocarpon HOM05D004779 ORTHO05D005737 4.5e-22 109.4 248 39.1
CAN.G439.1 Capsicum annuum HOM05D004779 ORTHO05D005737 5.9e-22 109.0 242 36.8
CiPaw.13G125400 Carya illinoinensis HOM05D004779 ORTHO05D005737 1.0e-21 108.2 262 35.1
Prupe.6G149600 Prunus persica HOM05D004779 ORTHO05D005737 1.3e-21 107.8 260 34.6
Atru.chr3.3301 Acer truncatum HOM05D004779 ORTHO05D005737 2.2e-21 107.1 252 36.1
COL.COLO4_25354 Corchorus olitorius HOM05D004779 ORTHO05D005737 1.9e-20 104.0 214 36.4
Lsat_1_v5_gn_3_114561 Lactuca sativa HOM05D004779 ORTHO05D005737 1.9e-20 104.0 256 35.2
Actinidia12899 Actinidia chinensis HOM05D004779 ORTHO05D005737 2.5e-20 103.6 272 34.2
CsaV3_1G004540 Cucumis sativus L. HOM05D004779 ORTHO05D005737 3.2e-20 103.2 239 35.6
Oeu051492.1 Olea europaea HOM05D004779 ORTHO05D005737 3.2e-20 103.2 256 39.5
HanXRQChr13g0420201 Helianthus annuus HOM05D004779 ORTHO05D005737 7.2e-20 102.1 262 34.4
HPP92_004176 Vanilla planifolia HOM05D004779 ORTHO05D005737 7.2e-20 102.1 242 38.4
THA.LOC104799595 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 9.3e-20 101.7 258 36.0
HanXRQChr03g0091061 Helianthus annuus HOM05D004779 ORTHO05D005737 1.2e-19 101.3 245 36.7
Ciclev10027942m.g Citrus clementina HOM05D004779 ORTHO05D005737 4.6e-19 99.4 253 34.4
Ah.08g222510 Amaranthus hybridus HOM05D004779 ORTHO05D005737 7.9e-19 98.6 250 37.2
CDE01G0526 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 1.4e-18 97.8 215 38.6
Gohir.A07G114480 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.8e-18 97.4 254 32.3
Gohir.D07G118400 Gossypium hirsutum HOM05D004779 ORTHO05D005737 2.3e-18 97.1 252 32.5
PSO384G0479 Papaver somniferum HOM05D004779 ORTHO05D005737 2.3e-18 97.1 166 42.2
FAN22G0927 Fragaria x ananassa HOM05D004779 ORTHO05D013607 3.0e-18 96.7 212 37.7
Eucgr.J00599 Eucalyptus grandis HOM05D004779 ORTHO05D005737 2.5e-17 93.6 261 34.1
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 3.3e-17 93.2 294 33.7
Potri.009G155400 Populus trichocarpa HOM05D004779 ORTHO05D005737 5.7e-17 92.4 266 34.2
Peaxi162Scf01091g00011 Petunia axillaris HOM05D004779 ORTHO05D005737 9.7e-17 91.7 246 36.6
AUR62001587 Chenopodium quinoa HOM05D004779 ORTHO05D005737 1.7e-16 90.9 171 39.8
AL6G32490 Arabidopsis lyrata HOM05D004779 ORTHO05D005737 1.4e-15 87.8 256 33.6
Gorai.013G256500 Gossypium raimondii HOM05D004779 ORTHO05D005737 4.1e-15 86.3 234 33.8
EL10Ac7g16253 Beta vulgaris HOM05D004779 ORTHO05D005737 5.3e-15 85.9 251 35.1
Migut.D02461 Erythranthe guttata HOM05D004779 ORTHO05D005737 1.2e-14 84.7 262 36.3
Gorai.001G127300 Gossypium raimondii HOM05D004779 ORTHO05D005737 1.5e-14 84.3 252 30.6
SGA_v2.0_scaffold7G04016 Striga asiatica HOM05D004779 ORTHO05D005737 2.0e-14 84.0 252 32.9
Cc01_g08160 Coffea canephora HOM05D004779 ORTHO05D005737 3.4e-14 83.2 255 33.7
Gohir.D13G225700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.0e-13 81.6 238 32.8
FAN02G4109 Fragaria x ananassa HOM05D004779 ORTHO05D005737 1.3e-13 81.3 168 39.9
Cfa005492 Carpinus fangiana HOM05D004779 ORTHO05D005737 2.9e-13 80.1 296 30.4
Manes.11G104300 Manihot esculenta HOM05D004779 ORTHO05D005737 2.9e-13 80.1 257 33.1
Carub.0006s1924 Capsella rubella HOM05D004779 ORTHO05D005737 5.0e-13 79.3 258 34.5
FAN21G1171 Fragaria x ananassa HOM05D004779 ORTHO05D005737 6.5e-13 79.0 225 32.4
AT5G20930 Arabidopsis thaliana HOM05D004779 ORTHO05D005737 8.5e-13 78.6 259 31.3
THA.LOC104810971 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 1.4e-12 77.8 253 32.4
Migut.O00734 Erythranthe guttata HOM05D004779 ORTHO05D005737 2.5e-12 77.0 253 34.4
SalBow6G6366 Salvia bowleyana HOM05D004779 ORTHO05D005737 2.5e-12 77.0 263 34.2
Zm00001eb214860 Zea mays HOM05D004779 ORTHO05D005737 2.5e-12 77.0 245 33.9
CARHR191920 Cardamine hirsuta HOM05D004779 ORTHO05D005737 3.2e-12 76.6 257 32.7
Thhalv10012855m.g Eutrema salsugineum HOM05D004779 ORTHO05D005737 4.2e-12 76.3 261 31.0
ECA240G3152 Erigeron canadensis HOM05D004779 ORTHO05D005737 5.5e-12 75.9 224 33.5
Cpa.g.sc103.54 Carica papaya HOM05D004779 ORTHO05D005737 1.2e-11 74.7 237 30.8
Mapoly0004s0128 Marchantia polymorpha HOM05D004779 ORTHO05D005737 1.2e-11 74.7 240 31.7
Sp6g23590 Schrenkiella parvula HOM05D004779 ORTHO05D005737 1.2e-11 74.7 257 33.5
A10p19090 Brassica napus HOM05D004779 ORTHO05D005737 1.6e-11 74.3 240 31.2
Nitab4.5_0008410g0030 Nicotiana tabacum HOM05D004779 ORTHO05D005737 1.6e-11 74.3 173 37.6
Medtr5g087240 Medicago truncatula HOM05D004779 ORTHO05D005737 3.6e-11 73.2 186 31.2
PGR119G0691 Punica granatum HOM05D004779 ORTHO05D005737 6.1e-11 72.4 231 29.9
BcaC04g19491 Brassica carinata HOM05D004779 ORTHO05D005737 1.4e-10 71.2 241 32.0
C09p55170 Brassica napus HOM05D004779 ORTHO05D005737 1.4e-10 71.2 241 32.0
SMO340G0087 Selaginella moellendorffii HOM05D004779 ORTHO05D005737 3.9e-10 69.7 240 32.9
C02p10520 Brassica napus HOM05D004779 ORTHO05D005737 6.7e-10 68.9 260 31.2
BraA02t05604Z Brassica rapa HOM05D004779 ORTHO05D005737 6.7e-10 68.9 260 31.2
Aa31LG1G13840 Aethionema arabicum HOM05D004779 ORTHO05D005737 1.1e-09 68.2 251 28.7
BraA10t43988Z Brassica rapa HOM05D004779 ORTHO05D005737 2.6e-09 67.0 256 30.9
Potri.004G193300 Populus trichocarpa HOM05D004779 ORTHO05D005737 4.4e-09 66.2 258 29.1
BolC9t58378H Brassica oleracea HOM05D004779 ORTHO05D005737 5.7e-09 65.9 255 31.0
DCAR_012261 Daucus carota HOM05D004779 ORTHO05D005737 2.2e-08 63.9 243 34.6
MSTRG.21000 Avicennia marina HOM05D004779 ORTHO05D005737 1.4e-07 61.2 206 35.4
BcaB05g22801 Brassica carinata HOM05D004779 ORTHO05D005737 1.4e-07 61.2 263 30.8
Medtr5g087050 Medicago truncatula HOM05D004779 ORTHO05D005737 1.4e-07 61.2 176 30.1
BNapus_Darmor_BZH_scaffold_38p01260 Brassica napus HOM05D004779 ORTHO05D005737 3.1e-07 60.1 262 29.8
BcaC03g13814 Brassica carinata HOM05D004779 ORTHO05D005737 4.1e-07 59.7 258 29.8
BolC2t07083H Brassica oleracea HOM05D004779 ORTHO05D005737 5.3e-07 59.3 259 29.3
BcaB08g37316 Brassica carinata HOM05D004779 ORTHO05D005737 6.9e-07 58.9 263 27.4


User provided reference genes

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