Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.9e-150 535.8 269 100.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 5.7e-70 268.5 191 64.4
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 7.4e-70 268.1 225 57.3
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 9.7e-70 267.7 198 62.6
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 2.8e-69 266.2 214 59.8
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 8.2e-69 264.6 224 58.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.1e-68 264.2 188 64.4
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.1e-68 264.2 188 64.4
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.4e-68 263.8 218 59.2
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 4.1e-68 262.3 222 59.0
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 6.9e-68 261.5 188 66.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.2e-67 260.8 190 63.7
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.2e-67 260.8 218 58.7
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.0e-67 260.0 191 62.3
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 3.4e-67 259.2 195 61.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 3.4e-67 259.2 195 61.0
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 1.3e-66 257.3 191 63.4
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.7e-66 256.9 191 62.3
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 1.7e-66 256.9 239 52.7
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 2.2e-66 256.5 195 61.0
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 5.0e-66 255.4 191 60.7
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 5.0e-66 255.4 190 63.7
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.1e-65 254.2 191 62.3
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.1e-65 254.2 195 61.5
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.4e-65 253.8 195 59.0
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.4e-65 253.8 191 61.8
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.9e-65 253.4 191 61.3
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 2.5e-65 253.1 198 59.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.5e-65 253.1 191 61.3
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.5e-65 253.1 191 61.8
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 2.5e-65 253.1 195 59.5
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 3.2e-65 252.7 187 64.2
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 3.2e-65 252.7 198 59.6
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 3.2e-65 252.7 195 59.0
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 4.2e-65 252.3 191 61.3
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 4.2e-65 252.3 193 62.7
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 5.5e-65 251.9 204 58.3
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 7.2e-65 251.5 195 59.0
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 7.2e-65 251.5 191 60.7
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 9.4e-65 251.1 195 61.5
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 9.4e-65 251.1 194 58.8
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 9.4e-65 251.1 191 60.7
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.2e-64 250.8 218 56.4
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.6e-64 250.4 198 60.6
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 2.1e-64 250.0 212 56.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.1e-64 250.0 191 60.7
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.7e-64 249.6 191 60.7
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.7e-64 249.6 195 61.0
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.6e-64 249.2 221 55.7
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.6e-64 249.2 228 56.1
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 4.6e-64 248.8 230 52.2
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 6.1e-64 248.4 191 60.2
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 6.1e-64 248.4 195 57.9
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.8e-63 246.9 190 62.1
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.8e-63 246.9 195 57.9
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.8e-63 246.9 195 58.5
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.8e-63 246.9 223 55.6
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 2.3e-63 246.5 195 56.9
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 2.3e-63 246.5 193 57.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 3.0e-63 246.1 191 58.6
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 3.0e-63 246.1 199 58.8
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.0e-63 246.1 191 59.7
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 3.9e-63 245.7 191 59.2
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 5.1e-63 245.4 191 59.2
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 1.5e-62 243.8 187 62.0
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.5e-62 243.8 195 58.5
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.6e-62 243.0 198 59.1
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 5.7e-62 241.9 219 54.3
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.3e-61 240.7 190 61.1
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.3e-61 240.7 190 61.1
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.3e-61 240.7 188 62.8
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.7e-61 240.4 190 61.1
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 2.2e-61 240.0 161 67.7
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 2.8e-61 239.6 190 61.1
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 4.8e-61 238.8 190 60.0
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.8e-61 238.8 198 58.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 6.3e-61 238.4 191 58.1
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 6.3e-61 238.4 195 54.4
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 8.2e-61 238.0 190 60.5
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.8e-60 236.9 237 48.1
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 2.4e-60 236.5 189 59.8
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.0e-59 233.4 190 59.5
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 3.4e-59 232.6 191 56.0
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 4.5e-59 232.3 191 57.1
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 4.5e-59 232.3 191 60.2
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.3e-58 230.7 188 60.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.9e-57 226.9 188 56.4
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.2e-57 225.7 186 59.7
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 5.5e-57 225.3 188 54.8
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 5.5e-57 225.3 188 54.8
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 3.3e-54 216.1 191 55.5
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 8.5e-50 201.4 155 61.9
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 1.1e-49 201.1 152 63.8
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 1.1e-49 201.1 224 45.1
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.2e-48 197.6 165 59.4
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.8e-47 193.7 127 69.3
SEGI_15869 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 2.3e-47 193.4 99 99.0
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.2e-46 191.0 130 72.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.2e-43 181.0 130 66.9
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 4.7e-40 169.1 226 40.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 5.0e-34 149.1 195 43.6
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.9e-33 147.1 218 39.0
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 7.2e-33 145.2 144 50.0
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 8.0e-32 141.7 222 38.7
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.3e-31 140.2 218 38.5
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.0e-31 139.8 151 47.7
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.0e-31 139.4 98 68.4
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 9.8e-30 134.8 110 56.4
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.2e-29 133.7 95 67.4
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 6.3e-29 132.1 225 36.9
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 1.1e-25 121.3 93 63.4
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 6.8e-23 112.1 135 48.1
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.9e-21 106.7 95 49.5
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.7e-21 106.3 124 45.2
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.3e-18 97.1 108 48.1
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 2.9e-13 80.1 55 60.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.2e-12 75.1 64 57.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-10 70.9 54 61.1
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.5e-06 57.8 37 70.3
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 5.8e-06 55.8 65 36.9


User provided reference genes

Program Settings