Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 3.0e-221 771.5 390 100.0
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 8.5e-67 258.5 136 89.7
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 3.2e-50 203.4 138 65.2
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 5.5e-50 202.6 138 68.8
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 7.2e-50 202.2 138 66.7
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 7.2e-50 202.2 138 66.7
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 9.4e-50 201.8 138 66.7
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 9.4e-50 201.8 136 68.4
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.6e-49 201.1 138 65.2
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 1.6e-49 201.1 136 66.2
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 1.6e-49 201.1 138 65.9
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 1.6e-49 201.1 137 66.4
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 1.6e-49 201.1 138 65.9
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 2.1e-49 200.7 138 65.2
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 2.1e-49 200.7 138 66.7
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 2.1e-49 200.7 138 65.9
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 2.7e-49 200.3 139 66.2
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.7e-49 200.3 138 67.4
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 2.7e-49 200.3 138 67.4
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.7e-49 200.3 138 67.4
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.6e-49 199.9 136 69.1
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 3.6e-49 199.9 136 67.6
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 3.6e-49 199.9 137 68.6
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 6.1e-49 199.1 138 64.5
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 6.1e-49 199.1 138 65.2
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 8.0e-49 198.7 136 68.4
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 8.0e-49 198.7 138 65.9
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.0e-48 198.4 137 66.4
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.0e-48 198.4 138 65.9
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.4e-48 198.0 137 66.4
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 1.4e-48 198.0 138 64.5
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.4e-48 198.0 138 66.7
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.4e-48 198.0 138 66.7
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 1.8e-48 197.6 138 64.5
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.8e-48 197.6 137 65.7
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 1.8e-48 197.6 139 64.7
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 2.3e-48 197.2 137 67.9
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 2.3e-48 197.2 137 65.0
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 3.0e-48 196.8 137 65.7
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.0e-48 196.8 135 66.7
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 3.0e-48 196.8 139 65.5
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 3.0e-48 196.8 137 67.2
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.0e-48 196.8 137 66.4
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 4.0e-48 196.4 137 65.7
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 4.0e-48 196.4 137 65.0
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 4.0e-48 196.4 137 65.0
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 4.0e-48 196.4 137 65.7
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 5.2e-48 196.1 137 64.2
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 5.2e-48 196.1 138 63.8
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 5.2e-48 196.1 134 68.7
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 5.2e-48 196.1 137 67.2
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 6.8e-48 195.7 138 63.8
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 8.8e-48 195.3 137 65.7
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 8.8e-48 195.3 137 64.2
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 8.8e-48 195.3 138 65.2
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 8.8e-48 195.3 138 64.5
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 1.2e-47 194.9 137 65.7
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 1.2e-47 194.9 138 64.5
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 1.2e-47 194.9 138 64.5
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.2e-47 194.9 137 65.7
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.5e-47 194.5 138 64.5
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 2.0e-47 194.1 137 65.0
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.0e-47 194.1 136 65.4
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.0e-47 194.1 137 65.7
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 2.0e-47 194.1 138 63.0
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 2.6e-47 193.7 138 63.8
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 2.6e-47 193.7 137 65.7
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 2.6e-47 193.7 138 65.2
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 3.4e-47 193.4 138 63.8
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 3.4e-47 193.4 136 64.7
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 3.4e-47 193.4 138 64.5
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 4.4e-47 193.0 137 65.7
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 4.4e-47 193.0 138 63.8
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 4.4e-47 193.0 137 65.0
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 4.4e-47 193.0 137 65.0
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 5.7e-47 192.6 137 67.2
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 5.7e-47 192.6 137 63.5
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 7.5e-47 192.2 130 66.9
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 9.8e-47 191.8 138 62.3
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 9.8e-47 191.8 138 62.3
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 1.3e-46 191.4 138 64.5
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 1.7e-46 191.0 137 64.2
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 61.6
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 61.6
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 63.8
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 62.3
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.7e-46 191.0 137 65.7
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 63.8
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 1.7e-46 191.0 130 66.9
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 1.7e-46 191.0 138 63.8
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.2e-46 190.7 138 61.6
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 2.8e-46 190.3 138 62.3
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 2.8e-46 190.3 138 62.3
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 2.8e-46 190.3 138 62.3
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.8e-46 190.3 136 65.4
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 3.7e-46 189.9 138 65.9
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 3.7e-46 189.9 138 65.2
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 4.9e-46 189.5 136 65.4
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 4.9e-46 189.5 138 60.9
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 4.9e-46 189.5 137 64.2
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 4.9e-46 189.5 137 63.5
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 6.3e-46 189.1 138 61.6
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 6.3e-46 189.1 138 61.6
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 8.3e-46 188.7 137 61.3
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 8.3e-46 188.7 137 61.3
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 8.3e-46 188.7 138 63.8
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 1.1e-45 188.3 137 61.3
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.1e-45 188.3 137 62.0
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.1e-45 188.3 137 62.0
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 1.4e-45 188.0 136 62.5
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 1.4e-45 188.0 138 64.5
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 1.4e-45 188.0 137 65.0
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 1.4e-45 188.0 137 63.5
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.4e-45 187.2 137 62.8
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.4e-45 187.2 137 62.0
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 2.4e-45 187.2 137 62.8
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 3.1e-45 186.8 137 63.5
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 4.1e-45 186.4 147 56.5
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 5.4e-45 186.0 137 62.0
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 7.0e-45 185.7 136 63.2
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 2.0e-44 184.1 136 63.2
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 2.0e-44 184.1 131 61.8
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 2.7e-44 183.7 131 64.1
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 3.5e-44 183.3 137 62.0
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 1.0e-43 181.8 134 62.7
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 1.0e-43 181.8 138 59.4
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 1.7e-43 181.0 138 60.1
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 3.3e-42 176.8 130 61.5
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 7.3e-42 175.6 136 60.3
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 2.8e-41 173.7 129 62.8
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.4e-39 166.8 120 62.5
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.2e-37 160.2 118 61.9
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 2.8e-33 147.1 135 48.9
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.3e-32 144.1 139 44.6
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.3e-30 138.3 131 54.2
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 5.0e-27 126.3 139 41.7
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.6e-25 121.3 140 41.4
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 2.5e-18 97.4 84 54.8
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 6.8e-16 89.4 100 45.0
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 1.8e-08 64.7 44 63.6
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 8.9e-08 62.4 51 56.9
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.2e-07 62.0 37 67.6


User provided reference genes

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