Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.4e-95 351.7 178 100.0
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 1.3e-49 200.3 167 59.9
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 6.2e-49 198.0 160 61.9
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 1.1e-48 197.2 137 67.9
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 1.4e-48 196.8 136 66.9
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 3.1e-48 195.7 134 68.7
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 5.3e-48 194.9 134 69.4
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 6.9e-48 194.5 138 66.7
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 9.0e-48 194.1 146 63.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 1.5e-47 193.4 121 73.6
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 2.0e-47 193.0 128 71.9
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 2.0e-47 193.0 134 69.4
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 2.0e-47 193.0 139 66.2
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 3.4e-47 192.2 127 70.9
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 3.4e-47 192.2 127 70.9
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 3.4e-47 192.2 127 70.9
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 3.4e-47 192.2 135 68.1
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 5.8e-47 191.4 140 64.3
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.3e-46 190.3 121 72.7
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 1.7e-46 189.9 121 71.9
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 2.2e-46 189.5 139 64.7
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 2.2e-46 189.5 139 66.2
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.9e-46 189.1 149 62.4
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 3.8e-46 188.7 133 65.4
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 3.8e-46 188.7 128 67.2
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 8.4e-46 187.6 148 61.5
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 1.1e-45 187.2 149 61.7
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 1.1e-45 187.2 145 62.1
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 1.4e-45 186.8 134 64.9
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 2.4e-45 186.0 148 62.2
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 3.2e-45 185.7 149 61.1
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 3.2e-45 185.7 148 59.5
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 4.2e-45 185.3 150 58.7
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 4.2e-45 185.3 138 63.0
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 5.5e-45 184.9 148 60.8
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 5.5e-45 184.9 126 67.5
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 7.1e-45 184.5 134 64.2
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 7.1e-45 184.5 135 63.7
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 9.3e-45 184.1 149 60.4
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 9.3e-45 184.1 146 61.0
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 1.2e-44 183.7 128 66.4
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 1.2e-44 183.7 150 60.0
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.2e-44 183.7 138 63.0
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 1.6e-44 183.3 121 71.1
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 1.6e-44 183.3 140 64.3
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 1.6e-44 183.3 133 64.7
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.1e-44 183.0 134 64.9
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.1e-44 183.0 152 59.9
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 2.7e-44 182.6 134 62.7
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.7e-44 182.6 134 62.7
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 3.5e-44 182.2 128 65.6
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 4.6e-44 181.8 147 59.9
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 4.6e-44 181.8 147 60.5
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 4.6e-44 181.8 121 68.6
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 4.6e-44 181.8 121 69.4
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 7.9e-44 181.0 119 70.6
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 7.9e-44 181.0 119 70.6
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 7.9e-44 181.0 149 57.0
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 1.0e-43 180.6 128 64.8
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.0e-43 180.6 121 69.4
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.0e-43 180.6 145 61.4
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 1.3e-43 180.3 120 68.3
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 2.3e-43 179.5 138 60.1
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 3.0e-43 179.1 146 58.9
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 3.0e-43 179.1 124 66.1
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 8.7e-43 177.6 147 57.8
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 1.1e-42 177.2 121 66.1
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.5e-42 176.8 149 57.0
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 1.5e-42 176.8 147 59.9
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 1.5e-42 176.8 133 62.4
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 1.9e-42 176.4 134 62.7
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 3.3e-42 175.6 122 66.4
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 3.3e-42 175.6 122 66.4
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 3.3e-42 175.6 122 66.4
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 4.3e-42 175.3 122 66.4
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 4.3e-42 175.3 122 66.4
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 7.4e-42 174.5 122 63.1
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 9.6e-42 174.1 152 55.9
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.6e-41 173.3 139 59.7
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 6.2e-41 171.4 120 66.7
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 2.4e-40 169.5 132 60.6
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 3.1e-40 169.1 149 57.7
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 5.8e-39 164.9 123 61.8
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 1.0e-38 164.1 135 57.0
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 3.2e-37 159.1 101 72.3
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.7e-36 156.0 137 55.5
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 3.3e-34 149.1 101 68.3
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 1.6e-33 146.7 101 64.4
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 2.2e-33 146.4 101 64.4
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 3.7e-33 145.6 101 68.3
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 4.8e-33 145.2 103 63.1
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 8.2e-33 144.4 101 65.3
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 2.5e-29 132.9 90 66.7
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-29 132.1 94 64.9
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-29 132.1 94 64.9
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 3.9e-27 125.6 102 59.8
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 6.7e-27 124.8 81 70.4
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 2.8e-25 119.4 122 48.4
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 2.4e-24 116.3 150 40.0
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 3.1e-24 115.9 81 64.2
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 4.1e-16 89.0 133 38.3
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 2.7e-12 76.3 60 60.0


User provided reference genes

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