Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 5.0e-309 1063.5 511 100.0
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 6.6e-168 594.7 470 60.2
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 6.6e-168 594.7 514 57.2
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.5e-159 564.3 478 58.6
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.5e-159 564.3 478 58.6
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 3.6e-158 562.4 496 57.3
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-158 562.4 478 58.4
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.7e-158 562.0 478 58.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.8e-157 560.1 478 58.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-157 559.7 478 57.7
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-157 558.9 478 57.9
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.2e-157 558.5 478 57.9
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 6.8e-157 558.1 481 57.6
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-156 557.0 477 58.1
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-156 556.6 510 55.3
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.0e-156 556.6 481 56.5
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 2.0e-156 556.6 478 57.9
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 2.0e-156 556.6 473 56.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.4e-156 555.8 469 57.1
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-156 555.1 510 55.1
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-156 555.1 510 55.1
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-155 553.1 510 54.9
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.9e-155 552.7 466 58.8
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 8.3e-155 551.2 475 56.8
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.1e-154 550.8 504 56.2
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.6e-153 547.0 483 56.9
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 8.6e-152 541.2 387 64.3
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 1.1e-151 540.8 475 56.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.3e-151 538.9 465 57.6
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 5.6e-151 538.5 480 55.2
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 5.6e-151 538.5 466 56.9
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 9.5e-151 537.7 507 53.5
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.2e-150 537.3 430 60.2
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.6e-150 537.0 395 64.8
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 2.1e-150 536.6 412 63.1
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.8e-150 536.2 387 62.5
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 2.8e-150 536.2 464 57.5
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 4.7e-150 535.4 473 57.3
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 4.7e-150 535.4 453 58.9
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 6.2e-150 535.0 467 57.6
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 6.2e-150 535.0 464 57.8
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 6.2e-150 535.0 495 55.2
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 8.1e-150 534.6 466 55.8
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 8.1e-150 534.6 468 56.8
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 4.0e-149 532.3 471 56.3
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 4.0e-149 532.3 488 55.9
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 5.2e-149 531.9 393 63.6
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 6.8e-149 531.6 473 57.1
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 6.8e-149 531.6 446 59.9
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 6.8e-149 531.6 473 57.3
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.2e-148 530.8 466 55.6
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 3.4e-148 529.3 467 55.9
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 9.8e-148 527.7 482 56.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 2.9e-147 526.2 399 61.4
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 4.9e-147 525.4 466 55.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 6.4e-147 525.0 501 52.3
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.1e-146 524.2 465 55.3
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 4.1e-146 522.3 478 56.1
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 5.4e-146 521.9 407 60.9
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 7.1e-146 521.5 398 61.1
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 9.2e-146 521.2 397 62.7
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.2e-145 520.8 398 61.3
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 2.1e-145 520.0 463 56.6
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 2.7e-145 519.6 404 61.4
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 4.6e-145 518.8 360 66.9
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 6.0e-145 518.5 390 63.3
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 7.8e-145 518.1 478 55.6
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 7.8e-145 518.1 491 54.4
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.9e-144 515.8 396 63.4
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 5.1e-144 515.4 404 60.6
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 8.6e-144 514.6 404 62.1
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.1e-143 514.2 399 62.4
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.1e-143 514.2 407 60.2
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.5e-143 513.8 399 60.9
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 5.6e-143 511.9 392 62.2
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.6e-142 509.2 435 58.2
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 4.7e-142 508.8 483 53.6
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 8.1e-142 508.1 396 59.6
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 2.3e-141 506.5 386 63.2
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.5e-140 503.8 399 60.2
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 7.6e-140 501.5 397 60.5
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.9e-139 499.6 402 60.0
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 3.8e-139 499.2 372 61.0
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 3.8e-139 499.2 497 50.9
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 7.1e-138 495.0 407 57.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.3e-136 490.7 356 64.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 1.3e-136 490.7 353 65.2
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.3e-136 490.0 398 59.8
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 3.3e-135 486.1 413 58.1
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 6.2e-134 481.9 368 61.1
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 2.9e-131 473.0 346 62.7
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.8e-131 472.6 348 64.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 4.2e-122 442.6 478 50.6
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 1.1e-109 401.4 405 49.6
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.4e-109 400.2 295 62.7
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.2e-105 387.9 293 61.8
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 6.0e-105 385.6 354 55.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 8.2e-94 348.6 330 52.4
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 4.7e-89 332.8 432 42.6
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.4e-79 299.7 453 38.4
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 1.1e-74 285.0 448 37.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 5.5e-74 282.7 211 64.5
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.0e-51 208.8 163 62.0
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 5.6e-50 203.0 299 38.1
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 3.0e-43 180.6 398 31.4
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 7.3e-42 176.0 324 33.3
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 6.2e-33 146.4 124 54.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.7e-30 138.3 304 32.9
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.2e-23 115.5 95 58.9
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 9.9e-23 112.5 279 30.1
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.0e-15 88.2 67 61.2
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 2.4e-13 81.3 58 63.8
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 2.7e-12 77.8 124 39.5


User provided reference genes

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