Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 2.5e-200 701.8 333 100.0
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 9.7e-112 407.5 293 64.2
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 2.8e-111 406.0 302 62.9
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 2.8e-111 406.0 302 62.9
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 3.1e-110 402.5 283 61.1
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 1.7e-108 396.7 279 63.4
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 1.1e-107 394.0 286 63.3
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 1.9e-107 393.3 325 56.6
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 1.9e-107 393.3 281 63.0
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 4.2e-107 392.1 270 64.4
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 7.2e-107 391.3 276 63.4
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 7.2e-107 391.3 267 64.0
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 9.4e-107 391.0 274 64.2
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 2.7e-106 389.4 278 61.2
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 4.7e-106 388.7 264 65.5
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 1.0e-105 387.5 302 59.3
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 1.4e-105 387.1 265 65.3
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.8e-105 386.7 264 66.3
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 1.8e-105 386.7 279 64.5
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 1.8e-105 386.7 279 62.0
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 2.3e-105 386.3 279 64.5
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 3.0e-105 386.0 279 62.0
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 3.0e-105 386.0 277 63.2
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 3.0e-105 386.0 271 64.9
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 3.9e-105 385.6 271 64.6
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 5.1e-105 385.2 299 59.5
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 5.1e-105 385.2 283 61.5
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 5.1e-105 385.2 299 60.2
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 6.7e-105 384.8 299 60.2
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 1.5e-104 383.6 281 63.7
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 2.6e-104 382.9 281 61.6
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 7.4e-104 381.3 259 63.7
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 1.3e-103 380.6 309 56.0
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 1.3e-103 380.6 327 56.0
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 2.8e-103 379.4 276 60.1
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 3.7e-103 379.0 269 63.9
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 4.8e-103 378.6 267 62.5
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 6.3e-103 378.3 278 61.9
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 6.3e-103 378.3 270 64.1
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 5.3e-102 375.2 265 63.0
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 7.0e-102 374.8 283 59.0
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 7.0e-102 374.8 279 60.2
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 9.1e-102 374.4 277 60.3
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.2e-101 374.0 261 64.0
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 1.2e-101 374.0 320 57.5
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 1.2e-101 374.0 297 59.3
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 1.5e-101 373.6 267 64.8
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 2.0e-101 373.2 332 52.7
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 2.6e-101 372.9 282 60.3
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 2.6e-101 372.9 271 61.6
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 4.5e-101 372.1 292 59.2
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 4.5e-101 372.1 286 61.2
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 4.5e-101 372.1 277 60.3
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 2.2e-100 369.8 283 59.0
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 2.2e-100 369.8 268 64.6
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 3.8e-100 369.0 314 55.7
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 5.0e-100 368.6 288 59.0
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 1.1e-99 367.5 285 59.3
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 1.9e-99 366.7 267 61.8
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 4.2e-99 365.5 314 55.1
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 5.5e-99 365.2 328 53.7
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 1.6e-98 363.6 276 59.4
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 1.6e-98 363.6 298 57.4
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 3.6e-98 362.5 288 58.7
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 4.7e-98 362.1 250 63.2
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 6.1e-98 361.7 267 62.2
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 8.0e-98 361.3 271 59.4
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 3.0e-97 359.4 299 57.2
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 3.0e-97 359.4 299 56.9
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 5.2e-97 358.6 276 59.4
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 8.8e-97 357.8 263 62.4
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 1.5e-96 357.1 287 57.5
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 2.0e-96 356.7 267 61.0
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 2.0e-96 356.7 288 56.6
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 3.3e-96 355.9 314 54.1
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 5.7e-96 355.1 267 59.9
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 7.4e-96 354.8 271 59.0
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 7.4e-96 354.8 271 59.0
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 7.4e-96 354.8 273 59.3
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 7.4e-96 354.8 273 59.3
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 7.4e-96 354.8 267 59.6
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 9.7e-96 354.4 267 61.0
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 1.3e-95 354.0 285 57.2
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 1.3e-95 354.0 278 59.4
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 1.7e-95 353.6 299 56.2
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 1.7e-95 353.6 280 57.5
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 2.2e-95 353.2 283 56.9
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 2.2e-95 353.2 279 58.4
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 8.2e-95 351.3 267 59.9
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 1.1e-94 350.9 273 59.0
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 1.4e-94 350.5 264 58.7
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 1.8e-94 350.1 254 61.4
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 7.0e-94 348.2 264 58.7
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 9.1e-94 347.8 266 61.7
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 1.7e-92 343.6 281 58.7
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 5.0e-92 342.0 271 57.9
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 8.5e-92 341.3 254 61.8
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 1.1e-91 340.9 267 58.1
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 5.5e-91 338.6 270 58.1
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 2.1e-90 336.7 268 57.8
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 1.2e-88 330.9 286 54.9
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 1.7e-87 327.0 269 54.3
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 1.8e-86 323.6 266 58.3
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 1.8e-86 323.6 268 56.0
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 2.2e-84 316.6 282 55.0
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 1.9e-83 313.5 237 61.6
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 3.6e-82 309.3 276 55.1
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 1.4e-81 307.4 286 53.5
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 4.8e-79 298.9 320 48.4
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 1.1e-75 287.7 195 67.7
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 3.3e-75 286.2 266 53.8
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.5e-72 277.3 270 50.0
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 6.3e-71 271.9 273 47.6
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 5.4e-70 268.9 267 48.7
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.8e-65 253.8 173 66.5
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 4.0e-65 252.7 179 63.7
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 6.2e-58 228.8 222 47.7
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.0e-56 223.8 276 44.9
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 3.5e-53 213.0 254 44.1
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 3.1e-49 199.9 276 41.3
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 8.9e-49 198.4 269 40.1
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 2.7e-45 186.8 136 61.0
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 2.3e-44 183.7 178 51.1
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 3.3e-43 179.9 286 38.1
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 9.6e-43 178.3 297 37.0
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 1.7e-39 167.5 136 57.4
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 6.4e-39 165.6 136 55.1
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.4e-38 164.5 304 35.9
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 1.9e-35 154.1 102 64.7
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 1.4e-33 147.9 122 53.3
Aqoxy3G02634 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.8e-33 147.5 163 44.2
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 1.3e-26 124.8 291 30.6
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 1.4e-25 121.3 98 54.1
PRCOL_00006577 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.9e-22 110.9 289 28.4
BcaB08g37428 Brassica carinata HOM05D004937 ORTHO05D006414 2.1e-21 107.5 72 62.5
PGSC0003DMG400026496 Solanum tuberosum HOM05D004937 ORTHO05D006414 2.7e-21 107.1 74 66.2
ClCG03G004650 Citrullus lanatus HOM05D000020 ORTHO05D000904 1.0e-20 105.1 130 42.3
Dinv13904 Davidia involucrata HOM05D004937 ORTHO05D006414 1.3e-18 98.2 63 63.5
Os10g0401100 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 3.3e-11 73.6 59 50.8
Dinv30719 Davidia involucrata HOM05D004937 ORTHO05D006414 1.6e-10 71.2 82 42.7
Os07g0510800 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 5.3e-09 66.2 62 48.4
SGA_v2.0_scaffold4G01909 Striga asiatica HOM05D004937 ORTHO05D006414 5.5e-06 56.2 64 45.3


User provided reference genes

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