Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 2.1e-177 625.5 302 100.0
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 8.2e-118 427.6 301 70.8
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 5.3e-117 424.9 305 69.2
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 9.1e-117 424.1 290 71.0
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 1.5e-116 423.3 308 67.9
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 1.5e-116 423.3 307 70.4
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 3.4e-116 422.2 305 67.5
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 7.7e-116 421.0 304 66.8
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.0e-115 420.6 297 70.0
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 3.8e-115 418.7 297 69.7
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 5.0e-115 418.3 308 67.2
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 6.5e-115 417.9 301 68.8
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 1.4e-114 416.8 306 67.0
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 1.9e-114 416.4 286 69.6
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 1.9e-114 416.4 280 69.6
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 4.2e-114 415.2 259 77.6
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 5.5e-114 414.8 290 69.0
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 7.2e-114 414.5 294 69.7
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.2e-113 413.7 297 68.4
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.6e-113 413.3 287 69.3
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.1e-113 412.9 261 73.6
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 2.1e-113 412.9 294 69.4
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 3.6e-113 412.1 294 69.4
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 4.7e-113 411.8 298 67.1
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 6.1e-113 411.4 285 70.2
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 6.1e-113 411.4 296 68.6
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 1.4e-112 410.2 307 65.8
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-112 410.2 293 69.3
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 1.8e-112 409.8 301 67.4
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.8e-112 409.8 277 70.8
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 1.8e-112 409.8 281 71.2
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 3.0e-112 409.1 259 75.3
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 3.9e-112 408.7 290 67.9
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 3.9e-112 408.7 301 67.4
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 3.9e-112 408.7 294 67.7
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 5.1e-112 408.3 290 68.6
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 5.1e-112 408.3 292 66.8
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 5.1e-112 408.3 299 66.9
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 6.7e-112 407.9 301 67.1
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 6.7e-112 407.9 259 75.3
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 8.8e-112 407.5 277 71.1
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 8.8e-112 407.5 281 70.5
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.1e-111 407.1 301 67.8
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.1e-111 407.1 301 67.4
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.5e-111 406.8 295 67.8
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 1.5e-111 406.8 301 66.4
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 1.5e-111 406.8 301 66.4
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 2.0e-111 406.4 289 68.2
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.0e-111 406.4 290 69.0
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 2.6e-111 406.0 296 67.9
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 4.4e-111 405.2 271 72.0
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 5.7e-111 404.8 291 67.7
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 7.4e-111 404.4 289 67.8
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 7.4e-111 404.4 294 69.4
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.3e-110 403.7 281 71.2
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.7e-110 403.3 292 68.2
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.7e-110 403.3 301 67.4
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.7e-110 403.3 293 64.8
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 1.7e-110 403.3 303 65.3
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 2.2e-110 402.9 274 69.7
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 2.8e-110 402.5 287 69.0
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 2.8e-110 402.5 259 74.1
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 4.8e-110 401.7 261 72.0
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.1e-109 400.6 286 66.8
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.8e-109 399.8 300 65.7
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 3.1e-109 399.1 258 73.3
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 4.1e-109 398.7 288 66.7
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 9.1e-109 397.5 300 65.3
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 9.1e-109 397.5 295 67.5
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 1.2e-108 397.1 293 65.9
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 2.0e-108 396.4 296 62.8
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 2.6e-108 396.0 304 64.8
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 4.5e-108 395.2 259 72.6
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 5.9e-108 394.8 282 68.8
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 2.9e-107 392.5 309 64.1
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 3.8e-107 392.1 291 65.3
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 8.5e-107 391.0 294 65.0
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 8.5e-107 391.0 273 69.2
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 8.5e-107 391.0 293 64.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 2.5e-106 389.4 281 67.3
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 4.2e-106 388.7 297 63.6
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 7.2e-106 387.9 277 66.8
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.0e-104 382.1 311 63.0
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 3.3e-103 379.0 295 63.4
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 5.7e-103 378.3 307 62.5
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.3e-102 377.1 274 66.4
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 2.8e-102 375.9 279 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 1.1e-101 374.0 253 69.6
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.9e-99 365.9 302 62.6
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 5.0e-99 365.2 257 63.8
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 2.5e-98 362.8 398 50.8
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 1.0e-96 357.5 280 62.5
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 2.4e-93 346.3 274 61.3
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 4.1e-93 345.5 319 56.7
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 7.0e-93 344.7 289 62.3
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 7.0e-93 344.7 289 62.3
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 7.0e-93 344.7 295 59.3
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 4.5e-92 342.0 245 68.6
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 2.6e-87 326.2 211 73.9
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 5.7e-87 325.1 224 69.2
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 4.9e-86 322.0 210 74.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 7.0e-85 318.2 241 64.7
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 3.5e-84 315.8 201 74.1
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.0e-83 314.3 201 73.1
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.0e-80 304.3 242 65.3
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 6.4e-78 295.0 192 72.4
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 2.7e-76 289.7 247 57.5
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 1.7e-67 260.4 267 48.7
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 3.9e-67 259.2 270 46.7
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 3.0e-59 233.0 282 48.6
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 2.3e-56 223.4 258 49.6
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.9e-53 213.8 263 45.2
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 7.3e-50 201.8 156 63.5
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 3.9e-43 179.5 287 43.2
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 5.8e-39 165.6 96 80.2
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.2e-37 159.5 138 60.1
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.7e-36 156.8 112 67.9
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.7e-36 156.8 135 57.8
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.1e-32 144.8 161 50.9
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.4e-29 134.4 66 86.4
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.9e-29 134.0 80 71.2
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 1.9e-26 124.0 70 81.4
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 8.4e-22 108.6 116 50.9
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 2.6e-15 87.0 67 59.7
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 9.7e-10 68.6 56 58.9
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 3.8e-06 56.6 52 55.8


User provided reference genes

Program Settings