Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33559 Sequoiadendron giganteum HOM05D008104 ORTHO05D010240 5.1e-31 137.1 69 100.0
GSVIVG01036937001 Vitis vinifera HOM05D008104 ORTHO05D010240 1.6e-24 115.5 67 85.1
Dinv09435 Davidia involucrata HOM05D008104 ORTHO05D010240 6.0e-24 113.6 69 82.6
Actinidia29331 Actinidia chinensis HOM05D008104 ORTHO05D010240 7.8e-24 113.2 69 82.6
MELO3C016253.2 Cucumis melo HOM05D008104 ORTHO05D010240 1.7e-23 112.1 67 82.1
CiPaw.12G072700 Carya illinoinensis HOM05D008104 ORTHO05D010240 2.3e-23 111.7 69 81.2
ClCG07G011300 Citrullus lanatus HOM05D008104 ORTHO05D010240 2.3e-23 111.7 67 82.1
Aqoxy7G04138 Aquilegia oxysepala HOM05D008104 ORTHO05D010240 3.9e-23 110.9 69 81.2
Hma1.2p1_1000F.1_g246475 Hydrangea macrophylla HOM05D008104 ORTHO05D010240 3.9e-23 110.9 69 81.2
Ciclev10003066m.g Citrus clementina HOM05D008104 ORTHO05D010240 5.1e-23 110.5 69 79.7
HanXRQChr13g0411531 Helianthus annuus HOM05D008104 ORTHO05D010240 5.1e-23 110.5 69 81.2
Manes.17G004800 Manihot esculenta HOM05D008104 ORTHO05D010240 5.1e-23 110.5 67 80.6
Sc07g0008300 Simmondsia chinensis HOM05D008104 ORTHO05D010240 5.1e-23 110.5 69 79.7
HPP92_025511 Vanilla planifolia HOM05D008104 ORTHO05D010240 5.1e-23 110.5 69 79.7
HPP92_025524 Vanilla planifolia HOM05D008104 ORTHO05D010240 5.1e-23 110.5 69 79.7
ECA240G1292 Erigeron canadensis HOM05D008104 ORTHO05D010240 1.1e-22 109.4 69 81.2
Lsat_1_v5_gn_5_60680 Lactuca sativa HOM05D008104 ORTHO05D010240 1.1e-22 109.4 69 79.7
MBI04_g30773_MAGBIO Magnolia biondii HOM05D008104 ORTHO05D010240 1.1e-22 109.4 67 80.6
Medtr5g026530 Medicago truncatula HOM05D008104 ORTHO05D010240 1.5e-22 109.0 69 79.7
Phvul.002G125300 Phaseolus vulgaris HOM05D008104 ORTHO05D010240 1.5e-22 109.0 69 79.7
Thecc.03G324100 Theobroma cacao HOM05D008104 ORTHO05D010240 1.5e-22 109.0 69 79.7
Ca_25079_v3 Cicer arietinum L. HOM05D008104 ORTHO05D010240 2.5e-22 108.2 69 78.3
Gohir.A08G146900 Gossypium hirsutum HOM05D008104 ORTHO05D010240 3.3e-22 107.8 69 78.3
Peaxi162Scf00045g01230 Petunia axillaris HOM05D008104 ORTHO05D010240 3.3e-22 107.8 69 78.3
arahy.Tifrunner.gnm1.ann1.N8H2I0 Arachis hypogaea HOM05D008104 ORTHO05D010240 5.6e-22 107.1 67 77.6
arahy.Tifrunner.gnm1.ann1.QYL8CN Arachis hypogaea HOM05D008104 ORTHO05D010240 5.6e-22 107.1 67 77.6
Prupe.5G017600 Prunus persica HOM05D008104 ORTHO05D010240 5.6e-22 107.1 69 78.3
ATR0829G147 Amborella trichopoda HOM05D008104 ORTHO05D010240 7.3e-22 106.7 67 77.6
Cc00_g10370 Coffea canephora HOM05D008104 ORTHO05D010240 7.3e-22 106.7 67 77.6
Psat2g143360 Pisum sativum HOM05D008104 ORTHO05D010240 7.3e-22 106.7 69 78.3
CAN.G1214.6 Capsicum annuum HOM05D008104 ORTHO05D010240 1.2e-21 105.9 69 76.8
TPR.G17263 Trifolium pratense HOM05D008104 ORTHO05D010240 1.2e-21 105.9 69 78.3
RcHm_v2.0_Chr7g0214551 Rosa chinensis HOM05D008104 ORTHO05D010240 2.1e-21 105.1 69 75.4
Sed0017262 Sechium edule HOM05D008104 ORTHO05D010240 2.1e-21 105.1 67 77.6
unitig_747.g21912 Utricularia gibba HOM05D008104 ORTHO05D010240 2.1e-21 105.1 69 75.4
CDE12G0204 Ceratophyllum demersum HOM05D008104 ORTHO05D010240 2.8e-21 104.8 67 77.6
Gohir.D08G168000 Gossypium hirsutum HOM05D008104 ORTHO05D010240 2.8e-21 104.8 69 76.8
Gorai.004G175200 Gossypium raimondii HOM05D008104 ORTHO05D010240 2.8e-21 104.8 69 76.8
Nitab4.5_0004379g0010 Nicotiana tabacum HOM05D008104 ORTHO05D010240 2.8e-21 104.8 67 76.1
Glyma.01G150600 Glycine max HOM05D008104 ORTHO05D010240 3.6e-21 104.4 69 75.4
Glyma.09G215500 Glycine max HOM05D008104 ORTHO05D010240 3.6e-21 104.4 64 78.1
Potri.001G129500 Populus trichocarpa HOM05D008104 ORTHO05D010240 3.6e-21 104.4 69 76.8
Ah.12g056100 Amaranthus hybridus HOM05D008104 ORTHO05D010240 4.7e-21 104.0 69 75.4
Solyc08g074750.2 Solanum lycopersicum HOM05D008104 ORTHO05D010240 4.7e-21 104.0 69 76.8
Sopen08g023350 Solanum pennellii HOM05D008104 ORTHO05D010240 4.7e-21 104.0 69 76.8
Atru.chr6.2114 Acer truncatum HOM05D008104 ORTHO05D010240 6.2e-21 103.6 69 76.8
Rhsim07G0174400 Rhododendron simsii HOM05D008104 ORTHO05D010240 8.1e-21 103.2 67 74.6
SMO340G0105 Selaginella moellendorffii HOM05D008104 ORTHO05D010240 8.1e-21 103.2 64 78.1
Migut.A00503 Erythranthe guttata HOM05D008104 ORTHO05D010240 1.1e-20 102.8 64 78.1
FAN04G2889 Fragaria x ananassa HOM05D008104 ORTHO05D010240 1.8e-20 102.1 69 72.5
FAN08G1504 Fragaria x ananassa HOM05D008104 ORTHO05D010240 1.8e-20 102.1 69 72.5
Hund14319 Selenicereus undatus HOM05D008104 ORTHO05D010240 3.1e-20 101.3 69 73.9
Lalb_Chr05g0215341 Lupinus albus HOM05D008104 ORTHO05D010240 4.0e-20 100.9 69 73.9
Zm00001eb246730 Zea mays HOM05D008104 ORTHO05D010240 5.2e-20 100.5 67 73.1
Lj2g0017308 Lotus japonicus HOM05D008104 ORTHO05D010240 6.9e-20 100.1 69 72.5
SalBow8G4418 Salvia bowleyana HOM05D008104 ORTHO05D010240 6.9e-20 100.1 67 71.6
AUR62007436 Chenopodium quinoa HOM05D008104 ORTHO05D010240 2.6e-19 98.2 69 71.0
AUR62027302 Chenopodium quinoa HOM05D008104 ORTHO05D010240 2.6e-19 98.2 69 71.0
EL10Ac5g11891 Beta vulgaris HOM05D008104 ORTHO05D010240 7.6e-19 96.7 69 71.0
Pp3c7_17130 Physcomitrium patens HOM05D008104 ORTHO05D010240 6.4e-18 93.6 64 68.8
Oeu028123.1 Olea europaea HOM05D008104 ORTHO05D010240 1.1e-17 92.8 72 69.4
Sed0014176 Sechium edule HOM05D008104 ORTHO05D010240 4.6e-16 87.4 65 64.6
Sabra01G0099800 Salix brachista HOM05D008104 ORTHO05D010240 6.6e-15 83.6 105 47.6
FvH4_5g24330 Fragaria vesca HOM05D008104 ORTHO05D010240 4.8e-13 77.4 50 74.0
vmacro05083 Vaccinium macrocarpon HOM05D008104 ORTHO05D010240 6.9e-12 73.6 102 44.1
Os02g0608700 Oryza sativa ssp. japonica HOM05D008104 ORTHO05D010240 3.8e-10 67.8 42 81.0
Nitab4.5_0004477g0040 Nicotiana tabacum HOM05D008104 ORTHO05D010240 6.4e-10 67.0 42 78.6
CDE01G0155 Ceratophyllum demersum HOM05D008104 ORTHO05D010240 1.9e-09 65.5 42 76.2
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 5.4e-09 63.9 42 76.2
Nitab4.5_0000183g0120 Nicotiana tabacum HOM05D008104 ORTHO05D010240 7.1e-09 63.5 41 78.0


User provided reference genes

Program Settings