Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33550 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.5e-176 622.9 351 100.0
SEGI_25306 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.7e-149 532.3 422 75.4
SEGI_40506 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.6e-149 531.9 420 77.1
SEGI_16998 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.3e-148 529.3 415 78.3
SEGI_13805 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.8e-148 527.7 416 77.9
SEGI_38038 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.7e-146 521.9 415 76.6
SEGI_19004 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-145 520.4 420 76.0
SEGI_09653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.4e-145 520.0 420 75.7
SEGI_02191 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.8e-140 503.1 292 99.7
SEGI_28893 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-137 493.8 398 76.4
SEGI_36664 Sequoiadendron giganteum HOM05D008617 ORTHO05D000002 5.4e-129 464.9 377 77.5
SEGI_01205 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 7.3e-126 454.5 303 78.5
SEGI_04865 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.4e-121 439.5 346 79.8
SEGI_36063 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.4e-121 439.5 369 75.9
SEGI_38653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.4e-121 439.5 369 75.9
SEGI_33273 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 9.2e-121 437.6 369 75.6
SEGI_30442 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.7e-119 433.3 369 75.1
SEGI_39807 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.6e-118 428.3 369 74.0
SEGI_25006 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 9.5e-118 427.6 369 74.3
SEGI_12525 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-117 427.2 369 73.7
SEGI_21641 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-112 410.6 353 74.8
SEGI_03250 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 5.6e-110 401.7 369 71.3
SEGI_41165 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.9e-108 394.4 369 69.9
SEGI_31503 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.6e-107 392.9 372 62.9
SEGI_33973 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-105 387.5 302 69.9
SEGI_02942 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.3e-103 380.6 369 61.0
SEGI_18505 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.8e-98 362.5 285 69.5
SEGI_14447 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.6e-96 355.5 285 68.8
SEGI_23817 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.4e-91 339.3 323 71.2
SEGI_24652 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.3e-90 337.4 323 70.6
SEGI_35117 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.7e-87 324.7 333 68.2
SEGI_03182 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.3e-79 300.8 270 63.7
SEGI_26611 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.3e-79 300.1 296 69.9
SEGI_15176 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.8e-61 240.0 244 58.2
SEGI_14591 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.7e-50 204.1 320 50.9
SEGI_19651 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.3e-18 98.2 120 48.3
SEGI_39097 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.6e-18 95.9 119 44.5
SEGI_18864 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-17 94.0 186 34.4
SEGI_24286 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.7e-13 80.1 227 29.1
DCAR_009032 Daucus carota HOM05D002899 ORTHO05D010792 2.1e-08 64.3 50 52.0
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 2.3e-07 60.8 76 42.1
SEGI_05766 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.8e-07 59.3 42 59.5
Duzib128G1532 Durio zibethinus HOM05D002899 ORTHO05D003850 1.5e-06 58.2 145 32.4
PSO384G0661 Papaver somniferum HOM05D002899 ORTHO05D003850 1.5e-06 58.2 112 36.6
AUR62030668 Chenopodium quinoa HOM05D002899 ORTHO05D003850 2.0e-06 57.8 53 50.9
Thecc.05G227100 Theobroma cacao HOM05D002899 ORTHO05D003850 2.0e-06 57.8 52 51.9
VMungo0464G0921 Vigna mungo HOM05D002899 ORTHO05D003850 2.6e-06 57.4 48 54.2
Phvul.004G082100 Phaseolus vulgaris HOM05D002899 ORTHO05D003850 3.4e-06 57.0 48 52.1
Dinv04696 Davidia involucrata HOM05D002899 ORTHO05D003850 4.4e-06 56.6 123 31.7
Gohir.A11G221200 Gossypium hirsutum HOM05D002899 ORTHO05D003850 4.4e-06 56.6 52 51.9
Gohir.D11G234700 Gossypium hirsutum HOM05D002899 ORTHO05D003850 4.4e-06 56.6 52 51.9
Gorai.007G247300 Gossypium raimondii HOM05D002899 ORTHO05D003850 4.4e-06 56.6 52 51.9
Lj5P331T27 Lonicera japonica HOM05D002899 ORTHO05D003850 4.4e-06 56.6 44 59.1
Peaxi162Scf01026g00001 Petunia axillaris HOM05D002899 ORTHO05D003850 4.4e-06 56.6 44 61.4
Potri.019G043200 Populus trichocarpa HOM05D002899 ORTHO05D003850 4.4e-06 56.6 50 54.0
Rhsim03G0225400 Rhododendron simsii HOM05D002899 ORTHO05D003850 5.8e-06 56.2 38 68.4
RcHm_v2.0_Chr4g0414501 Rosa chinensis HOM05D002899 ORTHO05D010192 5.8e-06 56.2 48 56.2
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 7.5e-06 55.8 54 50.0
Lj9C24T10 Lonicera japonica HOM05D002899 ORTHO05D003850 7.5e-06 55.8 137 29.2
PSO339G6595 Papaver somniferum HOM05D002899 ORTHO05D003850 7.5e-06 55.8 111 36.0
Gohir.D10G191600 Gossypium hirsutum HOM05D002899 ORTHO05D003850 9.8e-06 55.5 52 51.9
Gorai.011G214400 Gossypium raimondii HOM05D002899 ORTHO05D003850 9.8e-06 55.5 52 51.9
Lsat_1_v5_gn_9_37520 Lactuca sativa HOM05D002899 ORTHO05D003850 9.8e-06 55.5 53 50.9
Lju926C12T4 Lonicera japonica HOM05D002899 ORTHO05D003850 9.8e-06 55.5 44 59.1
SGA_v2.0_scaffold39G15236 Striga asiatica HOM05D002899 ORTHO05D003850 9.8e-06 55.5 35 71.4


User provided reference genes

Program Settings