Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.1e-66 254.2 124 100.0
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 6.7e-34 147.5 97 68.0
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 8.8e-34 147.1 95 72.6
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 7.4e-33 144.1 95 71.6
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 1.3e-32 143.3 95 71.6
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 1.3e-32 143.3 95 67.4
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 6.3e-32 141.0 95 67.4
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 8.2e-32 140.6 95 65.3
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 1.1e-31 140.2 95 65.3
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 1.1e-31 140.2 95 66.3
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 1.4e-31 139.8 95 65.3
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 1.8e-31 139.4 95 67.4
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 2.4e-31 139.0 100 64.0
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 2.4e-31 139.0 95 65.3
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 2.4e-31 139.0 97 64.9
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 2.4e-31 139.0 97 64.9
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 2.4e-31 139.0 95 64.2
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 2.4e-31 139.0 97 63.9
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 4.1e-31 138.3 103 62.1
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 4.1e-31 138.3 95 63.2
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 4.1e-31 138.3 95 65.3
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 4.1e-31 138.3 95 63.2
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 4.1e-31 138.3 95 63.2
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 4.1e-31 138.3 95 64.2
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 5.3e-31 137.9 95 65.3
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 5.3e-31 137.9 95 65.3
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 7.0e-31 137.5 95 64.2
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 7.0e-31 137.5 95 63.2
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 7.0e-31 137.5 95 64.2
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 7.0e-31 137.5 95 63.2
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 7.0e-31 137.5 95 64.2
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 9.1e-31 137.1 95 63.2
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 9.1e-31 137.1 95 63.2
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 9.1e-31 137.1 103 61.2
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.2e-30 136.7 95 62.1
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 1.2e-30 136.7 95 65.3
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 1.6e-30 136.3 95 62.1
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 1.6e-30 136.3 95 64.2
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.6e-30 136.3 95 63.2
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 2.0e-30 136.0 95 64.2
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 2.6e-30 135.6 95 63.2
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 3.5e-30 135.2 95 63.2
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 4.5e-30 134.8 95 64.2
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 4.5e-30 134.8 95 62.1
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 4.5e-30 134.8 94 63.8
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 4.5e-30 134.8 103 61.2
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 4.5e-30 134.8 95 64.2
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 5.9e-30 134.4 97 63.9
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.0e-29 133.7 97 66.0
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 1.0e-29 133.7 95 63.2
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.3e-29 133.3 95 62.1
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 1.3e-29 133.3 95 62.1
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 1.7e-29 132.9 95 63.2
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.9e-29 132.1 95 57.9
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 63.2
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 63.2
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 63.2
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 3.8e-29 131.7 94 63.8
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 64.2
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 3.8e-29 131.7 94 63.8
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.8e-29 131.7 94 63.8
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.8e-29 131.7 94 63.8
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 63.2
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 3.8e-29 131.7 95 60.0
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 5.0e-29 131.3 95 64.2
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 5.0e-29 131.3 117 54.7
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 5.0e-29 131.3 95 64.2
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 8.5e-29 130.6 95 62.1
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 1.1e-28 130.2 95 60.0
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 1.1e-28 130.2 96 63.5
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 1.1e-28 130.2 95 63.2
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 1.1e-28 130.2 95 63.2
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 1.1e-28 130.2 95 62.1
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.5e-28 129.8 94 62.8
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 2.5e-28 129.0 95 61.1
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 2.5e-28 129.0 95 57.9
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 3.2e-28 128.6 95 57.9
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 3.2e-28 128.6 95 62.1
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 7.2e-28 127.5 95 56.8
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 1.2e-27 126.7 95 61.1
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 1.6e-27 126.3 95 61.1
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 2.1e-27 125.9 95 62.1
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 3.6e-27 125.2 95 61.1
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 6.1e-27 124.4 108 54.6
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 8.0e-27 124.0 96 60.4
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 2.0e-25 119.4 95 57.9
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 7.5e-25 117.5 132 44.7
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 7.5e-25 117.5 95 56.8
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 7.5e-25 117.5 95 56.8
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 3.7e-24 115.2 97 57.7
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 4.1e-23 111.7 95 55.8
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 9.1e-23 110.5 95 55.8
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.9e-20 102.8 97 50.5
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 2.0e-17 92.8 65 61.5
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 4.1e-15 85.1 93 47.3
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.0e-09 66.2 45 64.4
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 2.6e-09 65.9 48 56.2


User provided reference genes

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