Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33504 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 3.5e-79 298.1 141 100.0
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 6.9e-27 124.4 109 57.8
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 9.1e-11 70.9 113 36.3
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.0e-09 67.4 118 34.7
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 8.5e-09 64.3 125 33.6
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 8.5e-09 64.3 119 32.8
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 1.1e-08 63.9 123 32.5
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 2.5e-08 62.8 107 32.7
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 2.5e-08 62.8 122 30.3
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 4.2e-08 62.0 122 30.3
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 4.2e-08 62.0 123 30.1
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 4.2e-08 62.0 131 32.8
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 5.5e-08 61.6 123 32.5
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 5.5e-08 61.6 122 30.3
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 5.5e-08 61.6 131 29.8
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.2e-08 61.2 96 36.5
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 9.4e-08 60.8 123 29.3
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.2e-07 60.5 127 33.1
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 1.2e-07 60.5 124 29.8
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 1.6e-07 60.1 128 30.5
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 3.6e-07 58.9 128 32.0
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 3.6e-07 58.9 123 29.3
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 3.6e-07 58.9 124 32.3
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 6.1e-07 58.2 124 32.3
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 6.1e-07 58.2 123 32.5
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 6.1e-07 58.2 123 32.5
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 1.4e-06 57.0 108 32.4
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 1.8e-06 56.6 131 31.3
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.8e-06 56.6 126 30.2
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 1.8e-06 56.6 126 29.4
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 3.0e-06 55.8 121 30.6
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 4.0e-06 55.5 118 29.7
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 5.2e-06 55.1 123 26.8
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 6.7e-06 54.7 126 31.0
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 6.7e-06 54.7 130 30.8


User provided reference genes

Program Settings