Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33454 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.8e-84 315.8 160 100.0
SEGI_36083 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.9e-73 279.3 159 89.3
SEGI_39020 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.1e-71 271.9 159 85.5
SEGI_17214 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.6e-67 259.6 159 83.0
SEGI_16110 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.4e-63 246.5 159 81.8
SEGI_14085 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 7.8e-59 230.7 158 77.8
SEGI_22916 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 4.9e-45 184.9 164 61.0
SEGI_30342 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 2.1e-16 89.7 164 42.7
SEGI_39801 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 2.8e-16 89.4 164 43.3
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 1.2e-14 84.0 122 36.1
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.4e-14 82.4 162 37.7
Actinidia26271 Actinidia chinensis HOM05D003328 ORTHO05D003722 3.2e-12 75.9 140 35.0
DCAR_011012 Daucus carota HOM05D003328 ORTHO05D003722 4.2e-12 75.5 122 38.5
Sabra17G0086600 Salix brachista HOM05D003328 ORTHO05D003722 9.3e-12 74.3 132 42.4
CSS0002115 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 2.7e-11 72.8 144 36.8
CSS0026022 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 2.7e-11 72.8 144 36.8
Sopen02g034040 Solanum pennellii HOM05D003328 ORTHO05D003722 2.7e-11 72.8 151 33.8
PGSC0003DMG400001380 Solanum tuberosum HOM05D003328 ORTHO05D003722 6.1e-11 71.6 142 35.2
Peaxi162Scf00020g02335 Petunia axillaris HOM05D003328 ORTHO05D003722 7.9e-11 71.2 132 37.9
vmacro18125 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 1.0e-10 70.9 156 39.1
Dinv34907 Davidia involucrata HOM05D003328 ORTHO05D003722 1.3e-10 70.5 145 38.6
Lj4A124T57 Lonicera japonica HOM05D003328 ORTHO05D003722 1.3e-10 70.5 146 36.3
CAN.G497.56 Capsicum annuum HOM05D003328 ORTHO05D003722 1.8e-10 70.1 143 35.7
Actinidia17606 Actinidia chinensis HOM05D003328 ORTHO05D003722 3.0e-10 69.3 150 33.3
Potri.017G100600 Populus trichocarpa HOM05D003328 ORTHO05D003722 3.9e-10 68.9 143 38.5
Solyc02g089250.4 Solanum lycopersicum HOM05D003328 ORTHO05D003722 3.9e-10 68.9 142 33.8
Thecc.04G107000 Theobroma cacao HOM05D003328 ORTHO05D003722 3.9e-10 68.9 139 38.8
Aa31LG11G13800 Aethionema arabicum HOM05D003328 ORTHO05D003722 5.1e-10 68.6 122 40.2
Duzib138G1365 Durio zibethinus HOM05D003328 ORTHO05D003722 5.1e-10 68.6 137 36.5
ECA232G1221 Erigeron canadensis HOM05D003328 ORTHO05D003722 5.1e-10 68.6 134 35.1
Atru.chr8.639 Acer truncatum HOM05D003328 ORTHO05D003722 6.7e-10 68.2 120 37.5
QL02p065219 Quercus lobata HOM05D003328 ORTHO05D003722 8.7e-10 67.8 120 40.8
Rhsim10G0059400 Rhododendron simsii HOM05D003328 ORTHO05D003722 8.7e-10 67.8 115 40.0
CSS0050346 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 1.1e-09 67.4 138 39.9
Actinidia18081 Actinidia chinensis HOM05D003328 ORTHO05D003722 1.5e-09 67.0 131 38.2
COL.COLO4_19737 Corchorus olitorius HOM05D003328 ORTHO05D003722 1.5e-09 67.0 127 37.8
CsaV3_5G038710 Cucumis sativus L. HOM05D003328 ORTHO05D003722 1.5e-09 67.0 139 36.0
TWI60G0197 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 1.5e-09 67.0 121 38.8
FAN09G3792 Fragaria x ananassa HOM05D003328 ORTHO05D003722 1.9e-09 66.6 134 35.1
Sed0000331 Sechium edule HOM05D003328 ORTHO05D003722 1.9e-09 66.6 114 38.6
Thecc.04G106800 Theobroma cacao HOM05D003328 ORTHO05D003722 1.9e-09 66.6 117 39.3
vmacro05612 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 2.5e-09 66.2 148 36.5
Atru.chr8.633 Acer truncatum HOM05D003328 ORTHO05D003722 3.3e-09 65.9 110 40.0
Ciclev10012100m.g Citrus clementina HOM05D003328 ORTHO05D003722 3.3e-09 65.9 115 40.0
Gohir.A03G150400 Gossypium hirsutum HOM05D003105 ORTHO05D003471 4.3e-09 65.5 159 29.6
Prupe.3G248700 Prunus persica HOM05D003328 ORTHO05D003722 4.3e-09 65.5 132 37.1
MELO3C022051.2 Cucumis melo HOM05D003328 ORTHO05D003722 5.7e-09 65.1 141 36.2
Hma1.2p1_1837F.1_g304780 Hydrangea macrophylla HOM05D003328 ORTHO05D003722 5.7e-09 65.1 143 33.6
PGR042G0257 Punica granatum HOM05D003328 ORTHO05D003722 5.7e-09 65.1 137 35.8
MELO3C022338.2 Cucumis melo HOM05D003105 ORTHO05D003471 7.4e-09 64.7 160 30.0
Dinv33868 Davidia involucrata HOM05D003328 ORTHO05D003722 7.4e-09 64.7 134 39.6
FAN05G0575 Fragaria x ananassa HOM05D003328 ORTHO05D003722 9.7e-09 64.3 134 34.3
MD09G1074600 Malus domestica HOM05D003328 ORTHO05D003722 9.7e-09 64.3 130 40.8
Atru.chr8.632 Acer truncatum HOM05D003328 ORTHO05D003722 1.3e-08 63.9 110 40.0
CsaV3_4G010050 Cucumis sativus L. HOM05D003328 ORTHO05D003722 1.3e-08 63.9 131 35.1
CARHR197550 Cardamine hirsuta HOM05D003328 ORTHO05D003722 1.6e-08 63.5 102 45.1
arahy.Tifrunner.gnm1.ann1.JWHM9L Arachis hypogaea HOM05D003328 ORTHO05D003722 2.2e-08 63.2 152 31.6
arahy.Tifrunner.gnm1.ann1.WJSS10 Arachis hypogaea HOM05D003328 ORTHO05D003722 2.2e-08 63.2 152 32.2
Migut.K00883 Erythranthe guttata HOM05D003328 ORTHO05D003722 2.2e-08 63.2 140 33.6
VMungo0464G1663 Vigna mungo HOM05D003328 ORTHO05D003722 2.2e-08 63.2 127 34.6
GSVIVG01036543001 Vitis vinifera HOM05D003328 ORTHO05D003722 2.2e-08 63.2 149 34.9
CAN.G427.4 Capsicum annuum HOM05D003328 ORTHO05D003722 2.8e-08 62.8 165 32.7
Gohir.A07G179500 Gossypium hirsutum HOM05D003328 ORTHO05D003722 2.8e-08 62.8 133 36.1
MD16G1124400 Malus domestica HOM05D003105 ORTHO05D003471 2.8e-08 62.8 132 28.0
QL03p051089 Quercus lobata HOM05D003105 ORTHO05D003471 3.7e-08 62.4 136 29.4
SEGI_33280 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.7e-08 62.4 125 39.2
Oeu062183.1 Olea europaea HOM05D003328 ORTHO05D003722 4.8e-08 62.0 118 37.3
SEGI_16578 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 4.8e-08 62.0 150 33.3
Aqoxy1G03531 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 6.3e-08 61.6 139 35.3
CiPaw.04G052000 Carya illinoinensis HOM05D003328 ORTHO05D003722 6.3e-08 61.6 149 32.2
AUR62023157 Chenopodium quinoa HOM05D003328 ORTHO05D003722 6.3e-08 61.6 127 34.6
Nitab4.5_0000154g0140 Nicotiana tabacum HOM05D003328 ORTHO05D003722 6.3e-08 61.6 135 35.6
Sed0005495 Sechium edule HOM05D003328 ORTHO05D003722 6.3e-08 61.6 106 39.6
AL6G26620 Arabidopsis lyrata HOM05D003328 ORTHO05D003722 8.2e-08 61.2 110 42.7
CiPaw.03G082700 Carya illinoinensis HOM05D003328 ORTHO05D003722 8.2e-08 61.2 123 38.2
Duzib211G0567 Durio zibethinus HOM05D003328 ORTHO05D003722 8.2e-08 61.2 132 36.4
Gorai.007G177000 Gossypium raimondii HOM05D003328 ORTHO05D003722 8.2e-08 61.2 106 41.5
TWI34G1159 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 8.2e-08 61.2 111 37.8
MSTRG.15433 Avicennia marina HOM05D003328 ORTHO05D003722 1.1e-07 60.8 132 35.6
Cc07_g04510 Coffea canephora HOM05D003328 ORTHO05D003722 1.1e-07 60.8 147 34.0
Gohir.D11G166000 Gossypium hirsutum HOM05D003328 ORTHO05D003722 1.1e-07 60.8 106 41.5
Nitab4.5_0001434g0120 Nicotiana tabacum HOM05D003328 ORTHO05D003722 1.1e-07 60.8 113 36.3
Rhsim08G0077500 Rhododendron simsii HOM05D003328 ORTHO05D003722 1.1e-07 60.8 145 34.5
Rhsim08G0077700 Rhododendron simsii HOM05D003328 ORTHO05D003722 1.1e-07 60.8 145 34.5
Sabra01G0043400 Salix brachista HOM05D003105 ORTHO05D003471 1.1e-07 60.8 128 29.7
Sc11g0000300 Simmondsia chinensis HOM05D003105 ORTHO05D003471 1.1e-07 60.8 128 28.1
Zm00001eb408940 Zea mays HOM05D003105 ORTHO05D003471 1.1e-07 60.8 158 29.1
Gohir.D07G186300 Gossypium hirsutum HOM05D003328 ORTHO05D003722 1.4e-07 60.5 110 37.3
Oeu031836.1 Olea europaea HOM05D003328 ORTHO05D003722 1.4e-07 60.5 107 37.4
PSO782G2223 Papaver somniferum HOM05D003328 ORTHO05D003722 1.4e-07 60.5 107 35.5
CiPaw.05G105500 Carya illinoinensis HOM05D003105 ORTHO05D003471 1.8e-07 60.1 127 27.6
ClCG06G001910 Citrullus lanatus HOM05D003105 ORTHO05D003471 1.8e-07 60.1 156 28.2
Eucgr.J01410 Eucalyptus grandis HOM05D003328 ORTHO05D003722 1.8e-07 60.1 104 40.4
Glyma.19G035700 Glycine max HOM05D003328 ORTHO05D003722 1.8e-07 60.1 106 39.6
TAR629G1921 Trochodendron aralioides HOM05D003328 ORTHO05D003722 1.8e-07 60.1 131 35.9
HPP92_024462 Vanilla planifolia HOM05D003105 ORTHO05D003471 1.8e-07 60.1 159 25.2
VMungo0464G0668 Vigna mungo HOM05D003328 ORTHO05D003722 1.8e-07 60.1 147 31.3
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 2.4e-07 59.7 118 38.1
AUR62009478 Chenopodium quinoa HOM05D003328 ORTHO05D003722 2.4e-07 59.7 122 33.6
Gorai.001G206900 Gossypium raimondii HOM05D003328 ORTHO05D003722 2.4e-07 59.7 105 38.1
RcHm_v2.0_Chr2g0164841 Rosa chinensis HOM05D003328 ORTHO05D003722 2.4e-07 59.7 123 36.6
ClCG07G016060 Citrullus lanatus HOM05D003328 ORTHO05D003722 3.1e-07 59.3 147 34.0
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 3.1e-07 59.3 111 37.8
DCAR_025455 Daucus carota HOM05D003328 ORTHO05D003722 4.1e-07 58.9 147 30.6
SalBow1G5190 Salvia bowleyana HOM05D003328 ORTHO05D003722 4.1e-07 58.9 107 39.3
Carub.0006s1393 Capsella rubella HOM05D003328 ORTHO05D003722 5.3e-07 58.5 135 37.8
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 5.3e-07 58.5 97 41.2
BcaNung02204 Brassica carinata HOM05D003328 ORTHO05D003722 6.9e-07 58.2 110 41.8
Cfa009403 Carpinus fangiana HOM05D003105 ORTHO05D003471 6.9e-07 58.2 155 25.2
Cc11_g17340 Coffea canephora HOM05D003105 ORTHO05D003471 6.9e-07 58.2 158 25.3
Thhalv10013771m.g Eutrema salsugineum HOM05D003328 ORTHO05D003722 6.9e-07 58.2 104 41.3
Lsat_1_v5_gn_4_173421 Lactuca sativa HOM05D003328 ORTHO05D003722 6.9e-07 58.2 132 31.1
Sp6g28340 Schrenkiella parvula HOM05D003328 ORTHO05D003722 6.9e-07 58.2 110 42.7
SEGI_34452 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 6.9e-07 58.2 125 37.6
Lsat_1_v5_gn_0_3380 Lactuca sativa HOM05D003105 ORTHO05D003471 9.0e-07 57.8 129 29.5
MD09G1075000 Malus domestica HOM05D003328 ORTHO05D003722 9.0e-07 57.8 107 36.4
Aqoxy3G03729 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 1.5e-06 57.0 139 34.5
ECA238G2003 Erigeron canadensis HOM05D003328 ORTHO05D003722 1.5e-06 57.0 106 37.7
Potri.001G060500 Populus trichocarpa HOM05D003105 ORTHO05D003471 1.5e-06 57.0 128 28.1
Ciclev10016966m.g Citrus clementina HOM05D003105 ORTHO05D003471 2.0e-06 56.6 150 29.3
Glyma.19G035600 Glycine max HOM05D003328 ORTHO05D003722 2.0e-06 56.6 127 31.5
HanXRQChr15g0464801 Helianthus annuus HOM05D003328 ORTHO05D003722 2.0e-06 56.6 126 31.0
Zm00001eb317830 Zea mays HOM05D003105 ORTHO05D003471 2.0e-06 56.6 107 29.9
Hund25487 Selenicereus undatus HOM05D003105 ORTHO05D003471 2.6e-06 56.2 128 27.3
SEGI_36274 Sequoiadendron giganteum HOM05D003105 ORTHO05D003471 2.6e-06 56.2 121 30.6
PGSC0003DMG400001028 Solanum tuberosum HOM05D003328 ORTHO05D003722 2.6e-06 56.2 131 33.6
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 3.4e-06 55.8 97 38.1
HanXRQChr17g0551651 Helianthus annuus HOM05D003105 ORTHO05D003471 3.4e-06 55.8 126 27.0
Sed0001071 Sechium edule HOM05D003105 ORTHO05D003471 3.4e-06 55.8 153 26.8
BcaC03g18449 Brassica carinata HOM05D003328 ORTHO05D003722 4.5e-06 55.5 107 42.1
BolC2t06720H Brassica oleracea HOM05D003328 ORTHO05D003722 4.5e-06 55.5 107 42.1
MBI19_g00148_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 4.5e-06 55.5 146 30.8
Sabra03G0122500 Salix brachista HOM05D003105 ORTHO05D003471 4.5e-06 55.5 126 27.8
ECA234G0704 Erigeron canadensis HOM05D003105 ORTHO05D003471 5.9e-06 55.1 128 26.6
Nn3g17524 Nelumbo nucifera HOM05D003328 ORTHO05D003722 5.9e-06 55.1 105 37.1
Potri.003G167100 Populus trichocarpa HOM05D003105 ORTHO05D003471 5.9e-06 55.1 128 26.6
TWI18G0471 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 7.7e-06 54.7 152 25.7
Ciclev10032019m.g Citrus clementina HOM05D003105 ORTHO05D003471 1.0e-05 54.3 128 26.6
Duzib147G0512 Durio zibethinus HOM05D003105 ORTHO05D003471 1.0e-05 54.3 126 29.4
HanXRQChr15g0489341 Helianthus annuus HOM05D003328 ORTHO05D003722 1.0e-05 54.3 111 32.4
Thecc.04G041300 Theobroma cacao HOM05D003105 ORTHO05D003471 1.0e-05 54.3 126 29.4


User provided reference genes

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