Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 2.7e-217 758.4 395 100.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 4.5e-132 475.3 311 74.3
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 6.9e-125 451.4 311 71.4
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.3e-123 447.2 320 69.1
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.4e-120 437.2 319 67.1
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.5e-119 433.7 326 65.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.6e-119 433.0 312 68.9
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.6e-119 433.0 327 64.2
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 5.7e-119 431.8 326 64.7
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 5.7e-119 431.8 310 69.7
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.7e-118 430.3 326 64.4
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.8e-117 426.8 319 64.9
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 3.1e-117 426.0 327 64.2
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 3.1e-117 426.0 322 64.3
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.1e-117 426.0 322 64.3
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.1e-117 426.0 326 64.1
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 4.1e-117 425.6 323 64.1
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 7.0e-117 424.9 318 64.5
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.2e-116 424.1 319 65.2
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.2e-116 424.1 319 65.5
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.6e-116 422.9 319 63.9
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 5.9e-116 421.8 319 63.9
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 7.7e-116 421.4 319 64.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 5.0e-115 418.7 319 63.6
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 5.0e-115 418.7 321 62.9
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 6.5e-115 418.3 319 64.6
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.1e-114 417.5 327 63.0
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.4e-114 417.2 319 63.6
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.9e-114 416.8 311 65.9
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.9e-114 416.8 327 62.7
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 3.2e-114 416.0 325 62.5
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 4.2e-114 415.6 319 63.6
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 4.2e-114 415.6 318 64.2
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 5.5e-114 415.2 327 62.4
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 5.5e-114 415.2 319 63.9
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 9.4e-114 414.5 327 61.5
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 1.2e-113 414.1 325 62.5
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 3.6e-113 412.5 319 63.9
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 6.1e-113 411.8 319 62.7
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 8.0e-113 411.4 323 62.8
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.0e-112 411.0 319 63.0
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.4e-112 410.6 319 62.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.8e-112 410.2 318 63.5
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 2.3e-112 409.8 327 61.2
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.3e-112 409.8 316 63.6
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.0e-112 409.5 319 61.8
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.0e-112 409.5 308 65.3
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 3.9e-112 409.1 319 62.7
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 8.8e-112 407.9 319 62.4
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 8.8e-112 407.9 319 63.3
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 8.8e-112 407.9 320 62.5
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.1e-111 407.5 319 61.4
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 2.0e-111 406.8 327 61.5
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.0e-111 406.8 318 61.0
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.6e-111 406.4 319 62.1
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 2.6e-111 406.4 319 61.8
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.6e-111 406.4 319 62.4
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 3.3e-111 406.0 319 62.4
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 7.4e-111 404.8 319 63.3
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.3e-110 404.1 319 63.6
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.7e-110 403.7 318 63.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 2.8e-110 402.9 319 62.7
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 2.8e-110 402.9 319 63.3
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 3.7e-110 402.5 319 63.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.7e-110 402.5 320 61.6
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 6.3e-110 401.7 321 61.7
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 6.3e-110 401.7 324 61.7
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 8.2e-110 401.4 319 62.4
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.1e-109 401.0 318 63.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.1e-109 401.0 319 61.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.4e-109 400.6 322 62.4
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.8e-109 400.2 319 62.4
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 2.4e-109 399.8 319 61.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.4e-109 399.8 319 61.4
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.4e-109 399.8 319 62.1
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 4.1e-109 399.1 319 61.4
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 5.3e-109 398.7 319 61.4
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 5.3e-109 398.7 319 61.4
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 9.1e-109 397.9 323 59.1
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 2.0e-108 396.7 319 62.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 2.0e-108 396.7 319 63.0
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 2.0e-108 396.7 319 63.0
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.6e-108 396.4 318 59.4
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 2.6e-108 396.4 318 59.4
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.0e-107 394.4 292 67.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.2e-105 387.5 318 60.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-104 384.0 311 60.8
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 2.6e-103 379.8 327 57.5
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.3e-103 379.4 311 60.8
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.3e-102 377.5 314 58.0
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.7e-102 375.9 319 58.0
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.4e-101 374.0 316 59.2
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.7e-100 369.8 302 59.9
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.5e-98 364.0 313 56.9
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.4e-96 357.5 313 57.8
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.6e-95 353.2 317 57.4
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-94 349.7 301 58.5
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-93 346.7 301 58.5
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 4.5e-92 342.4 313 55.3
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 2.3e-91 340.1 306 56.9
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.6e-91 338.6 298 57.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 5.5e-90 335.5 318 52.2
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.5e-82 310.8 259 60.2
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 7.3e-82 308.5 279 57.3
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.0e-79 300.4 288 52.8
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 8.3e-78 295.0 269 56.5
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 5.6e-74 282.3 271 55.7
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 2.8e-73 280.0 214 64.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 6.2e-73 278.9 282 52.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 9.8e-71 271.6 212 62.3
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-69 266.9 258 54.7
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-64 251.1 307 47.2
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 4.4e-47 193.0 288 40.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.2e-38 164.1 104 74.0
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.9e-37 161.0 272 36.4
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 7.4e-34 149.1 102 70.6
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 6.9e-32 142.5 193 44.0
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.0e-27 128.6 120 50.0
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.7e-27 125.6 95 61.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.5e-26 124.8 349 28.4
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 5.6e-26 122.9 324 29.3
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 4.0e-24 116.7 60 85.0
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-21 107.8 95 55.8
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.5e-20 103.6 72 72.2
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.8e-17 94.0 116 40.5
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.6e-15 87.4 61 62.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.4e-13 81.6 89 52.8
SEGI_03681 Sequoiadendron giganteum HOM05D001321 ORTHO05D005090 4.2e-13 80.1 88 54.5
SEGI_24911 Sequoiadendron giganteum HOM05D000972 ORTHO05D007713 1.8e-11 74.7 52 76.9


User provided reference genes

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