Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33400 Sequoiadendron giganteum HOM05D004779 ORTHO05D005737 1.1e-31 139.4 72 100.0
AUR62001587 Chenopodium quinoa HOM05D004779 ORTHO05D005737 3.1e-23 111.3 70 80.0
Lsat_1_v5_gn_3_114561 Lactuca sativa HOM05D004779 ORTHO05D005737 4.5e-22 107.5 59 88.1
Actinidia12899 Actinidia chinensis HOM05D004779 ORTHO05D005737 7.6e-22 106.7 59 89.8
ATR0697G120 Amborella trichopoda HOM05D004779 ORTHO05D005737 7.6e-22 106.7 61 82.0
Rhsim13G0199300 Rhododendron simsii HOM05D004779 ORTHO05D005737 1.7e-21 105.5 59 86.4
TAR369G0205 Trochodendron aralioides HOM05D004779 ORTHO05D005737 1.7e-21 105.5 59 88.1
EL10Ac7g16253 Beta vulgaris HOM05D004779 ORTHO05D005737 2.2e-21 105.1 58 91.4
Ah.08g222510 Amaranthus hybridus HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 91.4
ClCG06G014140 Citrullus lanatus HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 89.7
MELO3C017381.2 Cucumis melo HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 89.7
CsaV3_1G004540 Cucumis sativus L. HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 89.7
Sed0007784 Sechium edule HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 89.7
Sed0027738 Sechium edule HOM05D004779 ORTHO05D005737 2.9e-21 104.8 58 89.7
GSVIVG01037513001 Vitis vinifera HOM05D004779 ORTHO05D005737 2.9e-21 104.8 59 88.1
Dinv32142 Davidia involucrata HOM05D004779 ORTHO05D005737 3.8e-21 104.4 58 89.7
FvH4_3g26940 Fragaria vesca HOM05D004779 ORTHO05D005737 3.8e-21 104.4 58 87.9
FAN21G1171 Fragaria x ananassa HOM05D004779 ORTHO05D005737 3.8e-21 104.4 58 87.9
FAN25G2723 Fragaria x ananassa HOM05D004779 ORTHO05D005737 3.8e-21 104.4 58 87.9
vmacro04059 Vaccinium macrocarpon HOM05D004779 ORTHO05D005737 3.8e-21 104.4 59 86.4
CSS0005993 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 5.0e-21 104.0 59 86.4
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 5.0e-21 104.0 59 86.4
MD03G1161400 Malus domestica HOM05D004779 ORTHO05D005737 5.0e-21 104.0 58 87.9
MD11G1177500 Malus domestica HOM05D004779 ORTHO05D005737 5.0e-21 104.0 58 87.9
Prupe.6G149600 Prunus persica HOM05D004779 ORTHO05D005737 5.0e-21 104.0 58 87.9
RcHm_v2.0_Chr5g0049381 Rosa chinensis HOM05D004779 ORTHO05D005737 5.0e-21 104.0 58 87.9
CANSAT54G2495 Cannabis sativa HOM05D004779 ORTHO05D005737 6.5e-21 103.6 58 86.2
AUR62020193 Chenopodium quinoa HOM05D004779 ORTHO05D005737 6.5e-21 103.6 58 89.7
SGA_v2.0_scaffold7G04016 Striga asiatica HOM05D004779 ORTHO05D005737 6.5e-21 103.6 59 86.4
Aqoxy1G00564 Aquilegia oxysepala HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 83.1
DCAR_012261 Daucus carota HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 84.7
Glyma.02G271700 Glycine max HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 88.1
Glyma.14G044700 Glycine max HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 88.1
HanXRQChr03g0091061 Helianthus annuus HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 84.7
Phvul.008G210200 Phaseolus vulgaris HOM05D004779 ORTHO05D005737 8.4e-21 103.2 59 88.1
Atru.chr3.3301 Acer truncatum HOM05D004779 ORTHO05D005737 1.1e-20 102.8 58 86.2
VMungo0647G2327 Vigna mungo HOM05D004779 ORTHO05D005737 1.1e-20 102.8 59 86.4
CiPaw.13G125400 Carya illinoinensis HOM05D004779 ORTHO05D005737 1.4e-20 102.4 58 87.9
Gohir.A13G221700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.4e-20 102.4 59 84.7
Hma1.2p1_0218F.1_g092300 Hydrangea macrophylla HOM05D004779 ORTHO05D005737 1.4e-20 102.4 59 84.7
Sc06g0008600 Simmondsia chinensis HOM05D004779 ORTHO05D005737 1.4e-20 102.4 58 86.2
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.9e-20 102.1 58 86.2
Gohir.D13G225700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.9e-20 102.1 58 86.2
Gorai.013G256500 Gossypium raimondii HOM05D004779 ORTHO05D005737 1.9e-20 102.1 58 86.2
Thecc.09G267300 Theobroma cacao HOM05D004779 ORTHO05D005737 1.9e-20 102.1 58 86.2
COL.COLO4_25354 Corchorus olitorius HOM05D004779 ORTHO05D005737 2.5e-20 101.7 58 84.5
FAN16G1882 Fragaria x ananassa HOM05D004779 ORTHO05D005737 2.5e-20 101.7 58 86.2
Ciclev10027942m.g Citrus clementina HOM05D004779 ORTHO05D005737 3.2e-20 101.3 58 84.5
arahy.Tifrunner.gnm1.ann1.3IJ79N Arachis hypogaea HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 86.2
arahy.Tifrunner.gnm1.ann1.GQ8P42 Arachis hypogaea HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 86.2
MSTRG.18803 Avicennia marina HOM05D004779 ORTHO05D005737 5.5e-20 100.5 59 84.7
Ca_06128_v3 Cicer arietinum L. HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 86.2
FAN11G2927 Fragaria x ananassa HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 84.5
Gorai.001G127300 Gossypium raimondii HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 84.5
HanXRQChr13g0420201 Helianthus annuus HOM05D004779 ORTHO05D005737 5.5e-20 100.5 59 83.1
Lj2g0019509 Lotus japonicus HOM05D004779 ORTHO05D005737 5.5e-20 100.5 59 84.7
Medtr5g086790 Medicago truncatula HOM05D004779 ORTHO05D005737 5.5e-20 100.5 58 86.2
QL01p018814 Quercus lobata HOM05D004779 ORTHO05D005737 5.5e-20 100.5 59 83.1
Cfa005492 Carpinus fangiana HOM05D004779 ORTHO05D005737 7.1e-20 100.1 58 84.5
Haze_23617 Corylus avellana HOM05D004779 ORTHO05D005737 7.1e-20 100.1 58 84.5
Eucgr.J00599 Eucalyptus grandis HOM05D004779 ORTHO05D005737 7.1e-20 100.1 58 84.5
TPR.G13298 Trifolium pratense HOM05D004779 ORTHO05D005737 7.1e-20 100.1 58 84.5
Duzib170G1005 Durio zibethinus HOM05D004779 ORTHO05D005737 9.3e-20 99.8 58 82.8
Lalb_Chr04g0249841 Lupinus albus HOM05D004779 ORTHO05D005737 9.3e-20 99.8 58 86.2
PGR119G0691 Punica granatum HOM05D004779 ORTHO05D005737 9.3e-20 99.8 58 86.2
HPP92_004176 Vanilla planifolia HOM05D004779 ORTHO05D005737 9.3e-20 99.8 59 79.7
Gohir.A07G114480 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.2e-19 99.4 58 82.8
Manes.11G104300 Manihot esculenta HOM05D004779 ORTHO05D005737 1.2e-19 99.4 58 84.5
Nn2g14463 Nelumbo nucifera HOM05D004779 ORTHO05D005737 1.2e-19 99.4 59 78.0
Oeu051492.1 Olea europaea HOM05D004779 ORTHO05D005737 1.2e-19 99.4 59 79.7
Lalb_Chr10g0105761 Lupinus albus HOM05D004779 ORTHO05D005737 1.6e-19 99.0 58 84.5
Medtr5g087050 Medicago truncatula HOM05D004779 ORTHO05D005737 1.6e-19 99.0 58 84.5
Medtr5g087240 Medicago truncatula HOM05D004779 ORTHO05D005737 1.6e-19 99.0 58 84.5
SalBow6G6366 Salvia bowleyana HOM05D004779 ORTHO05D005737 2.1e-19 98.6 59 78.0
CDE01G0346 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 79.3
CDE05G1310 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 79.3
PSO339G0772 Papaver somniferum HOM05D004779 ORTHO05D005737 2.7e-19 98.2 59 78.0
PSO384G0479 Papaver somniferum HOM05D004779 ORTHO05D005737 2.7e-19 98.2 59 78.0
Potri.004G193300 Populus trichocarpa HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 82.8
Potri.009G155400 Populus trichocarpa HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 82.8
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 82.8
THA.LOC104799595 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 2.7e-19 98.2 58 81.0
Gohir.D07G118400 Gossypium hirsutum HOM05D004779 ORTHO05D005737 3.5e-19 97.8 58 82.8
ECA240G3152 Erigeron canadensis HOM05D004779 ORTHO05D005737 6.1e-19 97.1 57 82.5
Migut.D02461 Erythranthe guttata HOM05D004779 ORTHO05D005737 6.1e-19 97.1 59 78.0
Migut.O00734 Erythranthe guttata HOM05D004779 ORTHO05D005737 6.1e-19 97.1 59 78.0
Cpa.g.sc103.54 Carica papaya HOM05D004779 ORTHO05D005737 7.9e-19 96.7 58 79.3
Peaxi162Scf01091g00011 Petunia axillaris HOM05D004779 ORTHO05D005737 7.9e-19 96.7 58 82.8
Zm00001eb057260 Zea mays HOM05D004779 ORTHO05D005737 7.9e-19 96.7 59 76.3
MSTRG.20999 Avicennia marina HOM05D004779 ORTHO05D005737 1.0e-18 96.3 59 76.3
CAN.G439.1 Capsicum annuum HOM05D004779 ORTHO05D005737 1.3e-18 95.9 58 81.0
Cc01_g08160 Coffea canephora HOM05D004779 ORTHO05D005737 1.3e-18 95.9 59 81.4
FAN21G0778 Fragaria x ananassa HOM05D011291 ORTHO05D005737 1.3e-18 95.9 69 73.9
Solyc11g071680.2 Solanum lycopersicum HOM05D004779 ORTHO05D005737 1.3e-18 95.9 58 81.0
Sopen11g029350 Solanum pennellii HOM05D004779 ORTHO05D005737 1.3e-18 95.9 58 81.0
Os03g0749800 Oryza sativa ssp. japonica HOM05D004779 ORTHO05D005737 1.8e-18 95.5 59 72.9
SMO340G0087 Selaginella moellendorffii HOM05D004779 ORTHO05D005737 2.3e-18 95.1 59 76.3
SMO356G0434 Selaginella moellendorffii HOM05D004779 ORTHO05D005737 2.3e-18 95.1 59 76.3
Zm00001eb214860 Zea mays HOM05D004779 ORTHO05D005737 2.3e-18 95.1 59 72.9
Psat2g023720 Pisum sativum HOM05D004779 ORTHO05D005737 5.1e-18 94.0 58 81.0
CBR_g5694 Chara braunii HOM05D000019 ORTHO05D000353 6.7e-18 93.6 59 76.3
THA.LOC104810971 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 6.7e-18 93.6 58 75.9
SHI25307 Sapria himalayana HOM05D000105 ORTHO05D005737 1.5e-17 92.4 59 74.6
Thhalv10012855m.g Eutrema salsugineum HOM05D004779 ORTHO05D005737 1.9e-17 92.0 58 74.1
Sp6g23590 Schrenkiella parvula HOM05D004779 ORTHO05D005737 1.9e-17 92.0 58 74.1
BcaB05g22801 Brassica carinata HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BcaC03g13814 Brassica carinata HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BcaC04g19491 Brassica carinata HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
A10p19090 Brassica napus HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BNapus_Darmor_BZH_scaffold_38p01260 Brassica napus HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
C02p10520 Brassica napus HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
C09p55170 Brassica napus HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BolC2t07083H Brassica oleracea HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BolC9t58378H Brassica oleracea HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BraA02t05604Z Brassica rapa HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
BraA10t43988Z Brassica rapa HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 72.4
Carub.0006s1924 Capsella rubella HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 74.1
CARHR191920 Cardamine hirsuta HOM05D004779 ORTHO05D005737 3.3e-17 91.3 58 74.1
AL6G32490 Arabidopsis lyrata HOM05D004779 ORTHO05D005737 5.7e-17 90.5 58 72.4
AT5G20930 Arabidopsis thaliana HOM05D004779 ORTHO05D005737 5.7e-17 90.5 58 72.4
BcaB08g37316 Brassica carinata HOM05D004779 ORTHO05D005737 7.4e-17 90.1 58 70.7
Mapoly0004s0128 Marchantia polymorpha HOM05D004779 ORTHO05D005737 1.3e-16 89.4 59 72.9
Aa31LG1G13840 Aethionema arabicum HOM05D004779 ORTHO05D005737 2.2e-16 88.6 58 70.7
ECA238G1299 Erigeron canadensis HOM05D004779 ORTHO05D005737 1.1e-15 86.3 57 73.7
Pp3c24_17430 Physcomitrium patens HOM05D004779 ORTHO05D005737 2.2e-13 78.6 59 59.3
Medtr5g086970 Medicago truncatula HOM05D004779 ORTHO05D005737 9.4e-12 73.2 54 70.4
MCO16G693 Micromonas commoda HOM05D004779 ORTHO05D005737 4.1e-07 57.8 51 49.0


User provided reference genes

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