Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33382 Sequoiadendron giganteum HOM05D006395 ORTHO05D007894 2.4e-47 191.8 95 100.0
SEGI_13349 Sequoiadendron giganteum HOM05D006395 ORTHO05D007894 4.8e-16 87.8 43 97.7
Potri.001G280500 Populus trichocarpa HOM05D006395 ORTHO05D007894 1.1e-15 86.7 73 56.2
QL01p039673 Quercus lobata HOM05D006395 ORTHO05D007894 2.4e-15 85.5 73 53.4
Haze_24385 Corylus avellana HOM05D006395 ORTHO05D007894 5.4e-15 84.3 73 52.1
Thecc.09G354500 Theobroma cacao HOM05D006395 ORTHO05D007894 5.4e-15 84.3 73 53.4
TAR357G0003 Trochodendron aralioides HOM05D006395 ORTHO05D007894 9.1e-15 83.6 73 54.8
GSVIVG01024681001 Vitis vinifera HOM05D006395 ORTHO05D007894 9.1e-15 83.6 75 50.7
PGR102G2618 Punica granatum HOM05D006395 ORTHO05D007894 1.2e-14 83.2 73 52.1
COL.COLO4_11118 Corchorus olitorius HOM05D006395 ORTHO05D007894 2.7e-14 82.0 73 53.4
Eucgr.B02227 Eucalyptus grandis HOM05D006395 ORTHO05D007894 2.7e-14 82.0 71 54.9
Sabra16G0174100 Salix brachista HOM05D006395 ORTHO05D007894 3.5e-14 81.6 73 53.4
Atru.chr3.4150 Acer truncatum HOM05D006395 ORTHO05D007894 4.5e-14 81.3 73 53.4
Cpa.g.sc2.390 Carica papaya HOM05D006395 ORTHO05D007894 4.5e-14 81.3 74 55.4
Duzib168G0704 Durio zibethinus HOM05D006395 ORTHO05D007894 4.5e-14 81.3 73 50.7
Nitab4.5_0001941g0070 Nicotiana tabacum HOM05D006395 ORTHO05D007894 4.5e-14 81.3 73 50.7
Nitab4.5_0000967g0070 Nicotiana tabacum HOM05D006395 ORTHO05D007894 7.7e-14 80.5 73 49.3
PSO170G0213 Papaver somniferum HOM05D006395 ORTHO05D007894 1.0e-13 80.1 73 53.4
Cfa011744 Carpinus fangiana HOM05D006395 ORTHO05D007894 1.3e-13 79.7 73 49.3
Thhalv10016813m.g Eutrema salsugineum HOM05D006395 ORTHO05D007894 1.3e-13 79.7 73 50.7
Manes.18G144200 Manihot esculenta HOM05D006395 ORTHO05D007894 1.3e-13 79.7 73 53.4
Migut.D00856 Erythranthe guttata HOM05D006395 ORTHO05D007894 1.7e-13 79.3 71 52.1
Peaxi162Scf00053g02113 Petunia axillaris HOM05D006395 ORTHO05D007894 1.7e-13 79.3 73 49.3
Psat5g157120 Pisum sativum HOM05D006395 ORTHO05D007894 1.7e-13 79.3 73 50.7
TWI31G1172 Tripterygium wilfordii HOM05D006395 ORTHO05D007894 1.7e-13 79.3 73 52.1
Actinidia23216 Actinidia chinensis HOM05D006395 ORTHO05D007894 2.3e-13 79.0 71 52.1
Actinidia27062 Actinidia chinensis HOM05D006395 ORTHO05D007894 2.3e-13 79.0 71 52.1
Gohir.D03G141400 Gossypium hirsutum HOM05D006395 ORTHO05D007894 2.3e-13 79.0 74 50.0
Gorai.003G148100 Gossypium raimondii HOM05D006395 ORTHO05D007894 2.3e-13 79.0 74 50.0
MD03G1062200 Malus domestica HOM05D006395 ORTHO05D007894 2.9e-13 78.6 78 44.9
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 2.9e-13 78.6 85 43.5
PGSC0003DMG400020546 Solanum tuberosum HOM05D006395 ORTHO05D007894 3.8e-13 78.2 73 47.9
CSS0046123 Camellia sinensis var. sinensis HOM05D006395 ORTHO05D007894 5.0e-13 77.8 73 50.7
RcHm_v2.0_Chr5g0070801 Rosa chinensis HOM05D006395 ORTHO05D007894 5.0e-13 77.8 74 52.7
vmacro02938 Vaccinium macrocarpon HOM05D006395 ORTHO05D007894 5.0e-13 77.8 73 50.7
Solyc06g007250.4 Solanum lycopersicum HOM05D006395 ORTHO05D007894 6.5e-13 77.4 73 47.9
Sopen06g002210 Solanum pennellii HOM05D006395 ORTHO05D007894 6.5e-13 77.4 73 47.9
AL4G24880 Arabidopsis lyrata HOM05D006395 ORTHO05D007894 8.6e-13 77.0 73 49.3
CARHR123410 Cardamine hirsuta HOM05D006395 ORTHO05D007894 8.6e-13 77.0 73 49.3
Cc01_g14640 Coffea canephora HOM05D006395 ORTHO05D007894 8.6e-13 77.0 73 50.7
Nn2g10958 Nelumbo nucifera HOM05D006395 ORTHO05D007894 8.6e-13 77.0 73 49.3
Rhsim13G0066200 Rhododendron simsii HOM05D006395 ORTHO05D007894 8.6e-13 77.0 73 49.3
SGA_v2.0_scaffold20G09294 Striga asiatica HOM05D006395 ORTHO05D007894 8.6e-13 77.0 65 56.9
AT2G30105 Arabidopsis thaliana HOM05D006395 ORTHO05D007894 1.1e-12 76.6 73 49.3
Prupe.6G052000 Prunus persica HOM05D006395 ORTHO05D007894 1.1e-12 76.6 85 43.5
Sp4g12670 Schrenkiella parvula HOM05D006395 ORTHO05D007894 1.1e-12 76.6 73 50.7
Hund05040 Selenicereus undatus HOM05D006395 ORTHO05D007894 1.1e-12 76.6 69 53.6
Ca_14986_v3 Cicer arietinum L. HOM05D006395 ORTHO05D007894 1.5e-12 76.3 73 49.3
DCAR_018217 Daucus carota HOM05D006395 ORTHO05D007894 1.5e-12 76.3 86 43.0
Gohir.A03G027300 Gossypium hirsutum HOM05D006395 ORTHO05D007894 1.5e-12 76.3 74 48.6
A04p22790 Brassica napus HOM05D006395 ORTHO05D007894 1.9e-12 75.9 73 46.6
SEGI_40979 Sequoiadendron giganteum HOM05D006395 ORTHO05D007894 1.9e-12 75.9 35 100.0
PSO017G1403 Papaver somniferum HOM05D006395 ORTHO05D007894 2.5e-12 75.5 73 49.3
VMungo0540G1476 Vigna mungo HOM05D006395 ORTHO05D007894 2.5e-12 75.5 73 46.6
MSTRG.21234 Avicennia marina HOM05D006395 ORTHO05D007894 4.2e-12 74.7 71 49.3
BolC4t27411H Brassica oleracea HOM05D006395 ORTHO05D007894 4.2e-12 74.7 76 44.7
BraA04t17818Z Brassica rapa HOM05D006395 ORTHO05D007894 4.2e-12 74.7 73 45.2
Medtr3g465570 Medicago truncatula HOM05D006395 ORTHO05D007894 4.2e-12 74.7 73 49.3
TPR.G32918 Trifolium pratense HOM05D006395 ORTHO05D007894 5.5e-12 74.3 73 50.7
EL10Ac7g15889 Beta vulgaris HOM05D006395 ORTHO05D007894 7.2e-12 73.9 73 47.9
Sed0008967 Sechium edule HOM05D006395 ORTHO05D007894 1.2e-11 73.2 73 47.9
CDE12G0063 Ceratophyllum demersum HOM05D006395 ORTHO05D007894 1.6e-11 72.8 73 43.8
FvH4_3g39360 Fragaria vesca HOM05D006395 ORTHO05D007894 1.6e-11 72.8 73 50.7
FAN11G3343 Fragaria x ananassa HOM05D006395 ORTHO05D007894 1.6e-11 72.8 73 50.7
FAN25G1635 Fragaria x ananassa HOM05D006395 ORTHO05D007894 1.6e-11 72.8 73 50.7
Zm00001eb046860 Zea mays HOM05D006395 ORTHO05D007894 1.6e-11 72.8 74 47.3
BcaB06g28340 Brassica carinata HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 47.9
BcaC02g08052 Brassica carinata HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 45.2
BcaC02g08055 Brassica carinata HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 45.2
C04p58990 Brassica napus HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 45.2
Carub.0004s1124 Capsella rubella HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 47.9
Glyma.11G166200 Glycine max HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 46.6
THA.LOC104800755 Tarenaya hassleriana HOM05D006395 ORTHO05D007894 2.1e-11 72.4 73 46.6
Aqoxy1G01323 Aquilegia oxysepala HOM05D006395 ORTHO05D007894 2.8e-11 72.0 63 49.2
Glyma.18G059000 Glycine max HOM05D006395 ORTHO05D007894 2.8e-11 72.0 73 43.8
Lalb_Chr18g0051251 Lupinus albus HOM05D006395 ORTHO05D007894 2.8e-11 72.0 73 47.9
ATR0174G031 Amborella trichopoda HOM05D006395 ORTHO05D007894 3.6e-11 71.6 65 49.2
ClCG02G019360 Citrullus lanatus HOM05D006395 ORTHO05D007894 3.6e-11 71.6 73 46.6
Dinv28676 Davidia involucrata HOM05D006395 ORTHO05D007894 3.6e-11 71.6 75 46.7
Sc06g0008170 Simmondsia chinensis HOM05D006395 ORTHO05D007894 4.7e-11 71.2 66 48.5
Phvul.006G072100 Phaseolus vulgaris HOM05D006395 ORTHO05D007894 6.1e-11 70.9 73 42.5
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 8.0e-11 70.5 85 43.5
FAN21G1642 Fragaria x ananassa HOM05D006395 ORTHO05D007894 8.0e-11 70.5 71 50.7
Lj6g0016849 Lotus japonicus HOM05D006395 ORTHO05D007894 1.0e-10 70.1 73 42.5
CBR_g32352 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-10 69.7 84 42.9
Migut.D00855 Erythranthe guttata HOM05D006395 ORTHO05D007894 2.3e-10 68.9 59 55.9
Pp3c8_15530 Physcomitrium patens HOM05D006395 ORTHO05D007894 4.0e-10 68.2 84 40.5
CsaV3_6G015980 Cucumis sativus L. HOM05D006395 ORTHO05D007894 6.8e-10 67.4 65 49.2
Lj2C1089G4 Lonicera japonica HOM05D006395 ORTHO05D007894 6.8e-10 67.4 84 40.5
CAN.G241.20 Capsicum annuum HOM05D006395 ORTHO05D007894 8.8e-10 67.0 73 41.1
arahy.Tifrunner.gnm1.ann1.775QX7 Arachis hypogaea HOM05D006395 ORTHO05D007894 2.6e-09 65.5 66 48.5
Ciclev10028704m.g Citrus clementina HOM05D006395 ORTHO05D007894 2.6e-09 65.5 73 49.3
Lj9A530T24 Lonicera japonica HOM05D006395 ORTHO05D007894 2.6e-09 65.5 57 49.1
arahy.Tifrunner.gnm1.ann1.P58CS4 Arachis hypogaea HOM05D006395 ORTHO05D007894 5.7e-09 64.3 66 47.0
MELO3C026838.2 Cucumis melo HOM05D006395 ORTHO05D007894 5.7e-09 64.3 65 46.2
HPP92_025106 Vanilla planifolia HOM05D006395 ORTHO05D007894 7.5e-09 63.9 63 47.6
AUR62009698 Chenopodium quinoa HOM05D006395 ORTHO05D007894 9.8e-09 63.5 77 39.0
Aa31LG5G6570 Aethionema arabicum HOM05D006395 ORTHO05D007894 1.3e-08 63.2 59 47.5
AUR62036248 Chenopodium quinoa HOM05D006395 ORTHO05D007894 1.3e-08 63.2 77 39.0
Cc03_g12880 Coffea canephora HOM05D006395 ORTHO05D007894 1.3e-08 63.2 75 44.0
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 2.2e-08 62.4 85 41.2
CAN.G241.12 Capsicum annuum HOM05D006395 ORTHO05D007894 2.8e-08 62.0 68 42.6
Hma1.2p1_0841F.1_g226810 Hydrangea macrophylla HOM05D006395 ORTHO05D007894 1.8e-07 59.3 78 41.0
Hma1.2p1_0841F.1_g226820 Hydrangea macrophylla HOM05D006395 ORTHO05D007894 1.8e-07 59.3 78 41.0
CiPaw.13G072800 Carya illinoinensis HOM05D006395 ORTHO05D007894 7.0e-07 57.4 73 39.7


User provided reference genes

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