Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33378 Sequoiadendron giganteum HOM05D002364 ORTHO05D002540 9.9e-47 189.9 104 100.0
Cfa002444 Carpinus fangiana HOM05D002364 ORTHO05D002540 3.0e-19 98.6 107 61.7
Haze_24665 Corylus avellana HOM05D002364 ORTHO05D002540 6.7e-19 97.4 107 61.7
Eucgr.K03254 Eucalyptus grandis HOM05D002364 ORTHO05D002540 1.5e-18 96.3 107 59.8
CANSAT01G0103 Cannabis sativa HOM05D002364 ORTHO05D002540 3.3e-18 95.1 107 57.9
CiPaw.04G187900 Carya illinoinensis HOM05D002364 ORTHO05D002540 5.7e-18 94.4 107 59.8
MSTRG.18329 Avicennia marina HOM05D002364 ORTHO05D002540 1.6e-17 92.8 107 57.0
Lalb_Chr02g0152561 Lupinus albus HOM05D002364 ORTHO05D002540 1.6e-17 92.8 107 59.8
Glyma.13G124500 Glycine max HOM05D002364 ORTHO05D002540 3.7e-17 91.7 107 57.9
TAR362G1303 Trochodendron aralioides HOM05D002364 ORTHO05D002540 3.7e-17 91.7 107 56.1
Lj5g0013714 Lotus japonicus HOM05D002364 ORTHO05D002540 8.2e-17 90.5 107 57.9
RcHm_v2.0_Chr6g0287711 Rosa chinensis HOM05D002364 ORTHO05D002540 8.2e-17 90.5 105 56.2
Rhsim13G0036200 Rhododendron simsii HOM05D002364 ORTHO05D002540 1.1e-16 90.1 107 57.0
MD10G1181300 Malus domestica HOM05D002364 ORTHO05D002540 1.4e-16 89.7 106 58.5
Oeu033802.1 Olea europaea HOM05D002364 ORTHO05D002540 1.4e-16 89.7 106 56.6
Ca_09671_v3 Cicer arietinum L. HOM05D002364 ORTHO05D002540 4.1e-16 88.2 107 57.0
TAR633G0449 Trochodendron aralioides HOM05D002364 ORTHO05D002540 4.1e-16 88.2 107 55.1
Cpa.g.sc165.15 Carica papaya HOM05D002364 ORTHO05D002540 5.3e-16 87.8 102 54.9
Duzib138G1348 Durio zibethinus HOM05D002364 ORTHO05D002540 5.3e-16 87.8 106 58.5
FvH4_2g21210 Fragaria vesca HOM05D002364 ORTHO05D002540 5.3e-16 87.8 105 56.2
FAN24G3112 Fragaria x ananassa HOM05D002364 ORTHO05D002540 5.3e-16 87.8 105 56.2
FAN15G1886 Fragaria x ananassa HOM05D002364 ORTHO05D002540 6.9e-16 87.4 105 58.1
FAN20G2656 Fragaria x ananassa HOM05D002364 ORTHO05D002540 6.9e-16 87.4 106 55.7
FAN27G1824 Fragaria x ananassa HOM05D002364 ORTHO05D002540 6.9e-16 87.4 105 58.1
Lalb_Chr21g0313971 Lupinus albus HOM05D002364 ORTHO05D002540 6.9e-16 87.4 107 57.0
Dinv34638 Davidia involucrata HOM05D002364 ORTHO05D002540 9.0e-16 87.0 107 57.0
Hma1.2p1_0576F.1_g181940 Hydrangea macrophylla HOM05D002364 ORTHO05D002540 9.0e-16 87.0 107 57.0
Atru.chr5.1730 Acer truncatum HOM05D002364 ORTHO05D002540 2.0e-15 85.9 108 54.6
Manes.13G035700 Manihot esculenta HOM05D002364 ORTHO05D002540 2.0e-15 85.9 107 55.1
TPR.G5923 Trifolium pratense HOM05D002364 ORTHO05D002540 2.0e-15 85.9 106 51.9
Potri.005G226400 Populus trichocarpa HOM05D002364 ORTHO05D002540 2.6e-15 85.5 108 58.3
MD05G1194700 Malus domestica HOM05D002364 ORTHO05D002540 3.4e-15 85.1 106 56.6
Glyma.10G038100 Glycine max HOM05D002364 ORTHO05D002540 4.5e-15 84.7 107 56.1
Ciclev10021562m.g Citrus clementina HOM05D002364 ORTHO05D002540 5.9e-15 84.3 108 54.6
DCAR_018494 Daucus carota HOM05D002364 ORTHO05D002540 5.9e-15 84.3 107 55.1
Prupe.8G221400 Prunus persica HOM05D002364 ORTHO05D002540 7.7e-15 84.0 108 56.5
VMungo0720G3189 Vigna mungo HOM05D002364 ORTHO05D002540 7.7e-15 84.0 107 55.1
Medtr1g069765 Medicago truncatula HOM05D002364 ORTHO05D002540 2.2e-14 82.4 106 55.7
Psat6g054200 Pisum sativum HOM05D002364 ORTHO05D002540 2.2e-14 82.4 108 55.6
Phvul.007G191700 Phaseolus vulgaris HOM05D002364 ORTHO05D002540 3.8e-14 81.6 107 54.2
Thecc.01G255800 Theobroma cacao HOM05D002364 ORTHO05D002540 3.8e-14 81.6 107 56.1
Manes.13G035500 Manihot esculenta HOM05D002364 ORTHO05D002540 6.5e-14 80.9 107 56.1
Peaxi162Scf00624g00314 Petunia axillaris HOM05D002364 ORTHO05D002540 8.5e-14 80.5 106 52.8
AL1G13480 Arabidopsis lyrata HOM05D002364 ORTHO05D002540 1.1e-13 80.1 102 55.9
Carub.0001s0304 Capsella rubella HOM05D002364 ORTHO05D002540 1.9e-13 79.3 102 55.9
Sopen09g028220 Solanum pennellii HOM05D002364 ORTHO05D002540 2.5e-13 79.0 107 51.4
Nitab4.5_0007062g0030 Nicotiana tabacum HOM05D002364 ORTHO05D002540 3.2e-13 78.6 106 51.9
Nitab4.5_0006107g0010 Nicotiana tabacum HOM05D002364 ORTHO05D002540 5.5e-13 77.8 106 52.8
Aqoxy5G00208 Aquilegia oxysepala HOM05D002364 ORTHO05D002540 2.1e-12 75.9 107 51.4
COL.COLO4_04022 Corchorus olitorius HOM05D002364 ORTHO05D002540 3.6e-12 75.1 107 54.2
PGSC0003DMG400010315 Solanum tuberosum HOM05D002364 ORTHO05D002540 3.6e-12 75.1 108 50.0
TWI18G0990 Tripterygium wilfordii HOM05D002364 ORTHO05D002540 3.6e-12 75.1 107 52.3
arahy.Tifrunner.gnm1.ann1.S0A29X Arachis hypogaea HOM05D002364 ORTHO05D002540 4.6e-12 74.7 109 51.4
Gohir.D07G220100 Gossypium hirsutum HOM05D002364 ORTHO05D002540 4.6e-12 74.7 106 55.7
Gorai.001G254400 Gossypium raimondii HOM05D002364 ORTHO05D002540 4.6e-12 74.7 106 55.7
Sc05g0000640 Simmondsia chinensis HOM05D002364 ORTHO05D002540 4.6e-12 74.7 104 49.0
Os10g0476000 Oryza sativa ssp. japonica HOM05D002364 ORTHO05D002540 7.9e-12 73.9 106 47.2
SalBow4G1524 Salvia bowleyana HOM05D002364 ORTHO05D002540 7.9e-12 73.9 107 53.3
Gohir.A07G213780 Gossypium hirsutum HOM05D002364 ORTHO05D002540 1.4e-11 73.2 106 54.7
Gorai.001G179100 Gossypium raimondii HOM05D002364 ORTHO05D002540 1.4e-11 73.2 106 53.8
unitig_8.g3736 Utricularia gibba HOM05D002364 ORTHO05D002540 1.4e-11 73.2 107 54.2
Ah.02g112020 Amaranthus hybridus HOM05D002364 ORTHO05D002540 3.0e-11 72.0 106 48.1
AT1G03900 Arabidopsis thaliana HOM05D002364 ORTHO05D002540 3.0e-11 72.0 101 51.5
arahy.Tifrunner.gnm1.ann1.47VIJ3 Arachis hypogaea HOM05D002364 ORTHO05D002540 3.0e-11 72.0 109 50.5
Gohir.D07G156200 Gossypium hirsutum HOM05D002364 ORTHO05D002540 3.0e-11 72.0 106 53.8
Solyc06g008340.4 Solanum lycopersicum HOM05D002364 ORTHO05D002540 3.0e-11 72.0 104 45.2
EL10As5g23478 Beta vulgaris HOM05D002364 ORTHO05D002540 3.9e-11 71.6 106 48.1
ATR0736G205 Amborella trichopoda HOM05D002364 ORTHO05D002540 5.1e-11 71.2 83 56.6
Sopen06g003190 Solanum pennellii HOM05D002364 ORTHO05D002540 5.1e-11 71.2 104 45.2
Cc01_g18190 Coffea canephora HOM05D002364 ORTHO05D002540 6.7e-11 70.9 107 52.3
PSO210G6351 Papaver somniferum HOM05D002364 ORTHO05D002540 6.7e-11 70.9 110 51.8
QL09p039635 Quercus lobata HOM05D002364 ORTHO05D002540 6.7e-11 70.9 86 54.7
MSTRG.21483 Avicennia marina HOM05D002364 ORTHO05D002540 8.8e-11 70.5 107 46.7
Gohir.A07G149900 Gossypium hirsutum HOM05D002364 ORTHO05D002540 8.8e-11 70.5 106 50.0
Nn1g06880 Nelumbo nucifera HOM05D002364 ORTHO05D002540 8.8e-11 70.5 107 47.7
Migut.D00440 Erythranthe guttata HOM05D002364 ORTHO05D002540 1.5e-10 69.7 107 51.4
Sed0010821 Sechium edule HOM05D002364 ORTHO05D002540 1.5e-10 69.7 101 54.5
PSO832G3897 Papaver somniferum HOM05D002364 ORTHO05D002540 2.5e-10 68.9 110 50.9
Potri.002G036400 Populus trichocarpa HOM05D002364 ORTHO05D002540 2.5e-10 68.9 107 56.1
Sp1g02750 Schrenkiella parvula HOM05D002364 ORTHO05D002540 2.5e-10 68.9 107 52.3
Actinidia30156 Actinidia chinensis HOM05D002364 ORTHO05D002540 4.3e-10 68.2 96 49.0
Lsat_1_v5_gn_5_182881 Lactuca sativa HOM05D002364 ORTHO05D002540 4.3e-10 68.2 106 49.1
PGSC0003DMG401025510 Solanum tuberosum HOM05D002364 ORTHO05D002540 4.3e-10 68.2 104 44.2
Hund09609 Selenicereus undatus HOM05D002364 ORTHO05D002540 5.7e-10 67.8 104 45.2
CAN.G1855.1 Capsicum annuum HOM05D002364 ORTHO05D002540 1.3e-09 66.6 106 47.2
Nitab4.5_0005593g0010 Nicotiana tabacum HOM05D002364 ORTHO05D002540 1.3e-09 66.6 100 51.0
GSVIVG01028358001 Vitis vinifera HOM05D002364 ORTHO05D002540 2.8e-09 65.5 107 49.5
CDE04G0285 Ceratophyllum demersum HOM05D002364 ORTHO05D002540 1.1e-08 63.5 106 50.9
ClCG07G001150 Citrullus lanatus HOM05D002364 ORTHO05D002540 1.1e-08 63.5 107 51.4
Nitab4.5_0000326g0150 Nicotiana tabacum HOM05D002364 ORTHO05D002540 1.1e-08 63.5 106 49.1
vmacro02675 Vaccinium macrocarpon HOM05D002364 ORTHO05D002540 1.1e-08 63.5 83 50.6
CiPaw.03G266300 Carya illinoinensis HOM05D002364 ORTHO05D002540 1.8e-08 62.8 107 48.6
Lj1A69G67 Lonicera japonica HOM05D002364 ORTHO05D002540 1.8e-08 62.8 108 47.2
BcaC05g24487 Brassica carinata HOM05D002364 ORTHO05D002540 4.1e-08 61.6 80 53.8
CSS0042466 Camellia sinensis var. sinensis HOM05D002364 ORTHO05D002540 4.1e-08 61.6 86 52.3
MELO3C012869.2 Cucumis melo HOM05D002364 ORTHO05D002540 5.3e-08 61.2 105 44.8
CsaV3_3G022120 Cucumis sativus L. HOM05D002364 ORTHO05D002540 5.3e-08 61.2 105 44.8
ECA247G3608 Erigeron canadensis HOM05D002364 ORTHO05D002540 5.3e-08 61.2 131 42.7
HanXRQChr10g0280811 Helianthus annuus HOM05D002364 ORTHO05D002540 5.3e-08 61.2 128 42.2
Mapoly0012s0162 Marchantia polymorpha HOM05D002364 ORTHO05D002540 5.3e-08 61.2 105 45.7
Oeu039672.2 Olea europaea HOM05D002364 ORTHO05D002540 5.3e-08 61.2 155 39.4
Sabra05G0174800 Salix brachista HOM05D002364 ORTHO05D002540 1.2e-07 60.1 88 50.0
Sp2g08940 Schrenkiella parvula HOM05D002364 ORTHO05D002540 1.5e-07 59.7 83 50.6
TWI75G1021 Tripterygium wilfordii HOM05D002364 ORTHO05D002540 2.0e-07 59.3 79 49.4
BolC8t46881H Brassica oleracea HOM05D002364 ORTHO05D002540 2.6e-07 58.9 101 48.5
THA.LOC104826045 Tarenaya hassleriana HOM05D002364 ORTHO05D002540 2.6e-07 58.9 81 48.1
CDE07G2052 Ceratophyllum demersum HOM05D002364 ORTHO05D002540 3.4e-07 58.5 106 45.3
AUR62024702 Chenopodium quinoa HOM05D002364 ORTHO05D002540 5.9e-07 57.8 114 44.7
Duzib211G0026 Durio zibethinus HOM05D002364 ORTHO05D002540 5.9e-07 57.8 83 51.8
THA.LOC104801150 Tarenaya hassleriana HOM05D002364 ORTHO05D002540 1.7e-06 56.2 79 49.4
Actinidia07306 Actinidia chinensis HOM05D002364 ORTHO05D002540 2.2e-06 55.8 86 46.5
AUR62011857 Chenopodium quinoa HOM05D002364 ORTHO05D002540 3.8e-06 55.1 114 43.0
Lsat_1_v5_gn_9_10500 Lactuca sativa HOM05D002364 ORTHO05D002540 3.8e-06 55.1 123 39.8
HPP92_008551 Vanilla planifolia HOM05D002364 ORTHO05D002540 3.8e-06 55.1 74 45.9


User provided reference genes

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