Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 3.6e-55 218.0 111 100.0
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 4.3e-24 114.8 94 61.7
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 2.8e-23 112.1 96 60.4
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 6.2e-23 110.9 87 63.2
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 6.2e-23 110.9 87 63.2
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 1.4e-22 109.8 90 61.1
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.8e-22 109.4 90 58.9
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 4.0e-22 108.2 90 60.0
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 4.0e-22 108.2 90 57.8
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 4.0e-22 108.2 92 59.8
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 5.3e-22 107.8 87 63.2
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 5.3e-22 107.8 90 58.9
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 5.3e-22 107.8 90 57.8
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 5.3e-22 107.8 90 58.9
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 5.3e-22 107.8 92 57.6
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 9.0e-22 107.1 90 60.0
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.2e-21 106.7 90 56.7
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 1.5e-21 106.3 90 58.9
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 1.5e-21 106.3 94 54.3
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 1.5e-21 106.3 90 58.9
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 2.0e-21 105.9 90 57.8
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 2.0e-21 105.9 87 60.9
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 2.0e-21 105.9 87 62.1
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 3.4e-21 105.1 93 57.0
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 3.4e-21 105.1 90 57.8
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 3.4e-21 105.1 87 58.6
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 4.5e-21 104.8 90 56.7
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 4.5e-21 104.8 90 54.4
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 4.5e-21 104.8 90 57.8
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 4.5e-21 104.8 90 57.8
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 4.5e-21 104.8 90 57.8
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 5.8e-21 104.4 90 55.6
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 5.8e-21 104.4 90 53.3
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 5.8e-21 104.4 90 54.4
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 5.8e-21 104.4 90 53.3
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 7.6e-21 104.0 87 56.3
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 7.6e-21 104.0 92 56.5
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 7.6e-21 104.0 90 56.7
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 7.6e-21 104.0 90 58.9
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 7.6e-21 104.0 90 58.9
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 1.0e-20 103.6 87 59.8
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 1.0e-20 103.6 87 60.9
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.0e-20 103.6 87 60.9
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.0e-20 103.6 87 60.9
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 1.0e-20 103.6 90 55.6
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 1.3e-20 103.2 90 53.3
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.3e-20 103.2 90 55.6
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.3e-20 103.2 93 55.9
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.3e-20 103.2 87 59.8
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 1.3e-20 103.2 90 55.6
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 1.3e-20 103.2 90 58.9
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 2.2e-20 102.4 90 57.8
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 2.2e-20 102.4 90 54.4
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 2.9e-20 102.1 90 53.3
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 2.9e-20 102.1 90 54.4
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 3.8e-20 101.7 90 54.4
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 3.8e-20 101.7 91 54.9
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 3.8e-20 101.7 92 52.2
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 4.9e-20 101.3 92 58.7
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 4.9e-20 101.3 102 52.0
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 4.9e-20 101.3 94 54.3
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 4.9e-20 101.3 90 53.3
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 4.9e-20 101.3 90 54.4
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 6.5e-20 100.9 93 55.9
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 6.5e-20 100.9 90 54.4
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 6.5e-20 100.9 85 60.0
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 6.5e-20 100.9 93 54.8
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 8.4e-20 100.5 90 55.6
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 1.1e-19 100.1 93 51.6
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.4e-19 99.8 102 50.0
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 1.4e-19 99.8 90 56.7
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 1.4e-19 99.8 90 56.7
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 2.5e-19 99.0 87 54.0
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 3.2e-19 98.6 90 54.4
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 4.2e-19 98.2 93 52.7
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 5.5e-19 97.8 92 51.1
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 7.1e-19 97.4 90 51.1
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 9.3e-19 97.1 90 52.2
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 1.6e-18 96.3 100 47.0
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 1.6e-18 96.3 86 53.5
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 2.1e-18 95.9 90 52.2
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 2.1e-18 95.9 90 53.3
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 1.3e-17 93.2 90 48.9
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 1.8e-17 92.8 87 54.0
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 1.8e-17 92.8 95 46.3
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 2.3e-17 92.4 90 50.0
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 6.7e-17 90.9 90 54.4
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 6.7e-17 90.9 90 48.9
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 1.1e-16 90.1 90 50.0
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 1.5e-16 89.7 133 39.8
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 4.8e-15 84.7 112 42.9
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.4e-14 83.2 92 44.6
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.4e-14 82.4 92 44.6
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.4e-14 82.4 92 44.6
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 4.1e-14 81.6 92 44.6
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 1.2e-13 80.1 71 57.7
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 2.0e-13 79.3 68 58.8
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 2.0e-13 79.3 68 58.8
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 2.6e-13 79.0 68 57.4
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 7.6e-13 77.4 61 59.0
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 1.1e-11 73.6 59 55.9
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 1.9e-11 72.8 120 39.2
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 4.2e-11 71.6 62 51.6
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 9.4e-11 70.5 90 41.1
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.5e-08 63.2 57 50.9
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 3.3e-08 62.0 85 42.4
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 3.7e-07 58.5 84 40.5
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 3.7e-07 58.5 88 34.1
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 1.1e-06 57.0 81 42.0
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 2.4e-06 55.8 81 38.3


User provided reference genes

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