Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33320 Sequoiadendron giganteum HOM05D000147 ORTHO05D005950 5.7e-42 173.7 81 100.0
Mapoly0087s0007 Marchantia polymorpha HOM05D000147 ORTHO05D005950 7.8e-15 83.6 52 71.2
ATR1149G150 Amborella trichopoda HOM05D000147 ORTHO05D005950 6.6e-14 80.5 52 67.3
Hma1.2p1_0298F.1_g117450 Hydrangea macrophylla HOM05D000147 ORTHO05D005950 2.5e-13 78.6 58 62.1
SMO358G0508 Selaginella moellendorffii HOM05D000147 ORTHO05D005950 2.5e-13 78.6 67 56.7
Os02g0740300 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D005950 5.6e-13 77.4 53 60.4
Hund23430 Selenicereus undatus HOM05D000147 ORTHO05D005950 2.1e-12 75.5 57 57.9
Lsat_1_v5_gn_7_14900 Lactuca sativa HOM05D000147 ORTHO05D005950 2.8e-12 75.1 76 52.6
Nn1g07278 Nelumbo nucifera HOM05D000147 ORTHO05D005950 3.6e-12 74.7 58 58.6
TAR627G0320 Trochodendron aralioides HOM05D000147 ORTHO05D005950 3.6e-12 74.7 57 64.9
arahy.Tifrunner.gnm1.ann1.0743V5 Arachis hypogaea HOM05D000147 ORTHO05D005950 8.1e-12 73.6 55 65.5
arahy.Tifrunner.gnm1.ann1.D0808P Arachis hypogaea HOM05D000147 ORTHO05D005950 8.1e-12 73.6 55 65.5
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 8.1e-12 73.6 53 64.2
TAR627G0645 Trochodendron aralioides HOM05D000147 ORTHO05D005950 8.1e-12 73.6 58 62.1
Ciclev10014675m.g Citrus clementina HOM05D000147 ORTHO05D005950 1.1e-11 73.2 77 54.5
MBI02_g15375_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D005950 1.1e-11 73.2 54 63.0
HanXRQChr15g0470791 Helianthus annuus HOM05D000147 ORTHO05D005950 1.4e-11 72.8 54 64.8
Lalb_Chr15g0087801 Lupinus albus HOM05D000147 ORTHO05D005950 1.4e-11 72.8 52 63.5
Peaxi162Scf00294g00916 Petunia axillaris HOM05D000070 ORTHO05D005950 1.4e-11 72.8 54 64.8
Aqoxy1G02947 Aquilegia oxysepala HOM05D000147 ORTHO05D005950 2.3e-11 72.0 58 58.6
CDE07G0653 Ceratophyllum demersum HOM05D000147 ORTHO05D005950 2.3e-11 72.0 52 61.5
FAN05G0232 Fragaria x ananassa HOM05D000147 ORTHO05D005950 2.3e-11 72.0 53 62.3
FAN05G2764 Fragaria x ananassa HOM05D000070 ORTHO05D005950 2.3e-11 72.0 53 62.3
Glyma.15G112100 Glycine max HOM05D000147 ORTHO05D005950 2.3e-11 72.0 52 61.5
Lj6g0003893 Lotus japonicus HOM05D000147 ORTHO05D005950 2.3e-11 72.0 55 63.6
PGR042G1740 Punica granatum HOM05D000147 ORTHO05D005950 2.3e-11 72.0 52 59.6
Cc09_g01170 Coffea canephora HOM05D000070 ORTHO05D005950 3.1e-11 71.6 59 57.6
Medtr2g024440 Medicago truncatula HOM05D000147 ORTHO05D005950 3.1e-11 71.6 55 61.8
CsaV3_6G048710 Cucumis sativus L. HOM05D000070 ORTHO05D005950 4.0e-11 71.2 60 51.7
Sed0005764 Sechium edule HOM05D000147 ORTHO05D005950 4.0e-11 71.2 52 61.5
THA.LOC104813427 Tarenaya hassleriana HOM05D000147 ORTHO05D005950 4.0e-11 71.2 57 64.9
VMungo0540G1662 Vigna mungo HOM05D000147 ORTHO05D005950 4.0e-11 71.2 52 61.5
Cpa.g.c34179.1 Carica papaya HOM05D000147 ORTHO05D005950 5.2e-11 70.9 52 63.5
PSO541G0930 Papaver somniferum HOM05D000147 ORTHO05D005950 5.2e-11 70.9 55 63.6
Psat1g178560 Pisum sativum HOM05D000147 ORTHO05D005950 5.2e-11 70.9 53 56.6
TPR.G13001 Trifolium pratense HOM05D000147 ORTHO05D005950 5.2e-11 70.9 53 58.5
Oeu002750.1 Olea europaea HOM05D000070 ORTHO05D005950 6.8e-11 70.5 54 61.1
CAN.G23.7 Capsicum annuum HOM05D000070 ORTHO05D005950 8.9e-11 70.1 53 62.3
ECA236G4610 Erigeron canadensis HOM05D002056 ORTHO05D005950 8.9e-11 70.1 54 61.1
Nitab4.5_0005882g0020 Nicotiana tabacum HOM05D000147 ORTHO05D005950 8.9e-11 70.1 54 59.3
CSS0044927 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D005950 1.2e-10 69.7 58 56.9
DCAR_024984 Daucus carota HOM05D000147 ORTHO05D005950 1.2e-10 69.7 53 62.3
PSO675G5655 Papaver somniferum HOM05D000147 ORTHO05D005950 1.2e-10 69.7 55 61.8
Cfa000159 Carpinus fangiana HOM05D000147 ORTHO05D005950 1.5e-10 69.3 53 62.3
Nitab4.5_0000005g0030 Nicotiana tabacum HOM05D000070 ORTHO05D005950 1.5e-10 69.3 54 59.3
Rhsim13G0150000 Rhododendron simsii HOM05D000147 ORTHO05D005950 1.5e-10 69.3 53 62.3
SGA_v2.0_scaffold7G03784 Striga asiatica HOM05D000070 ORTHO05D005950 1.5e-10 69.3 53 60.4
GSVIVG01004814001 Vitis vinifera HOM05D000147 ORTHO05D005950 1.5e-10 69.3 58 58.6
GSVIVG01004817001 Vitis vinifera HOM05D000070 ORTHO05D005950 1.5e-10 69.3 58 58.6
Migut.M01369 Erythranthe guttata HOM05D000147 ORTHO05D005950 2.0e-10 68.9 54 63.0
Lj1C1236T15 Lonicera japonica HOM05D000147 ORTHO05D005950 2.0e-10 68.9 53 60.4
Phvul.006G145500 Phaseolus vulgaris HOM05D000147 ORTHO05D005950 2.0e-10 68.9 52 59.6
FAN14G4662 Fragaria x ananassa HOM05D000147 ORTHO05D005950 2.6e-10 68.6 55 63.6
Sopen02g011700 Solanum pennellii HOM05D000070 ORTHO05D005950 2.6e-10 68.6 53 58.5
PGSC0003DMG402021461 Solanum tuberosum HOM05D000070 ORTHO05D005950 2.6e-10 68.6 53 58.5
Eucgr.E03984 Eucalyptus grandis HOM05D000147 ORTHO05D005950 3.4e-10 68.2 57 56.1
Gohir.A06G151300 Gossypium hirsutum HOM05D000070 ORTHO05D005950 3.4e-10 68.2 58 55.2
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 4.4e-10 67.8 76 53.9
FvH4_3g01380 Fragaria vesca HOM05D000147 ORTHO05D005950 4.4e-10 67.8 54 59.3
Solyc02g036330.3 Solanum lycopersicum HOM05D000070 ORTHO05D005950 4.4e-10 67.8 53 56.6
HPP92_017955 Vanilla planifolia HOM05D000147 ORTHO05D005950 4.4e-10 67.8 57 54.4
Gohir.D06G157500 Gossypium hirsutum HOM05D000070 ORTHO05D005950 5.8e-10 67.4 53 60.4
Gorai.010G184000 Gossypium raimondii HOM05D000147 ORTHO05D005950 5.8e-10 67.4 53 60.4
MD10G1327000 Malus domestica HOM05D000147 ORTHO05D005950 5.8e-10 67.4 53 58.5
FAN21G3947 Fragaria x ananassa HOM05D000147 ORTHO05D005950 7.5e-10 67.0 53 60.4
Prupe.4G015000 Prunus persica HOM05D000147 ORTHO05D005950 7.5e-10 67.0 56 62.5
vmacro03663 Vaccinium macrocarpon HOM05D000147 ORTHO05D005950 9.9e-10 66.6 53 60.4
Atru.chr10.2285 Acer truncatum HOM05D000147 ORTHO05D005950 1.3e-09 66.2 77 50.6
CiPaw.09G098300 Carya illinoinensis HOM05D000147 ORTHO05D005950 1.3e-09 66.2 54 57.4
Duzib160G0363 Durio zibethinus HOM05D002056 ORTHO05D005950 1.3e-09 66.2 53 58.5
Manes.16G002800 Manihot esculenta HOM05D000147 ORTHO05D005950 1.7e-09 65.9 53 58.5
Thecc.06G228500 Theobroma cacao HOM05D000147 ORTHO05D005950 1.7e-09 65.9 53 58.5
TWI38G0618 Tripterygium wilfordii HOM05D000147 ORTHO05D005950 1.7e-09 65.9 55 60.0
AL6G47800 Arabidopsis lyrata HOM05D000070 ORTHO05D005950 2.2e-09 65.5 54 64.8
MSTRG.7181 Avicennia marina HOM05D000070 ORTHO05D005950 2.2e-09 65.5 53 58.5
Carub.0006s3209 Capsella rubella HOM05D000147 ORTHO05D005950 2.2e-09 65.5 54 63.0
FAN09G4350 Fragaria x ananassa HOM05D000001 ORTHO05D005950 2.2e-09 65.5 50 60.0
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 2.9e-09 65.1 57 54.4
EL10Ac8g20131 Beta vulgaris HOM05D000147 ORTHO05D005950 2.9e-09 65.1 61 50.8
AUR62021899 Chenopodium quinoa HOM05D000147 ORTHO05D005950 2.9e-09 65.1 55 56.4
SalBow8G0879 Salvia bowleyana HOM05D000070 ORTHO05D005950 2.9e-09 65.1 53 58.5
Potri.004G004000 Populus trichocarpa HOM05D000147 ORTHO05D005950 3.7e-09 64.7 52 59.6
RcHm_v2.0_Chr5g0002011 Rosa chinensis HOM05D000147 ORTHO05D005950 3.7e-09 64.7 75 46.7
AT4G04180 Arabidopsis thaliana HOM05D000147 ORTHO05D005950 4.9e-09 64.3 53 64.2
AUR62012759 Chenopodium quinoa HOM05D000147 ORTHO05D005950 4.9e-09 64.3 55 58.2
Thhalv10028536m.g Eutrema salsugineum HOM05D000070 ORTHO05D005950 4.9e-09 64.3 76 51.3
CANSAT56G0204 Cannabis sativa HOM05D000070 ORTHO05D005950 6.4e-09 63.9 52 57.7
QL05p071825 Quercus lobata HOM05D000147 ORTHO05D005950 6.4e-09 63.9 54 57.4
RcHm_v2.0_Chr5g0002081 Rosa chinensis HOM05D000147 ORTHO05D005950 6.4e-09 63.9 55 58.2
Cre17.g726150 Chlamydomonas reinhardtii HOM05D000147 ORTHO05D005950 1.1e-08 63.2 47 59.6
unitig_748.g7944 Utricularia gibba HOM05D000070 ORTHO05D005950 1.1e-08 63.2 53 58.5
Duzib235G0285 Durio zibethinus HOM05D000070 ORTHO05D005950 1.4e-08 62.8 53 54.7
Sabra04G0002200 Salix brachista HOM05D000147 ORTHO05D005950 1.4e-08 62.8 52 59.6
BcaC04g21279 Brassica carinata HOM05D000147 ORTHO05D005950 1.9e-08 62.4 54 63.0
A09p26440 Brassica napus HOM05D000147 ORTHO05D005950 1.9e-08 62.4 54 63.0
C09p33620 Brassica napus HOM05D000147 ORTHO05D005950 1.9e-08 62.4 54 63.0
BolC9t56196H Brassica oleracea HOM05D000147 ORTHO05D005950 1.9e-08 62.4 54 63.0
BraA09t38218Z Brassica rapa HOM05D000147 ORTHO05D005950 1.9e-08 62.4 55 60.0
BcaB01g01796 Brassica carinata HOM05D000147 ORTHO05D005950 2.4e-08 62.0 56 60.7
CiPaw.10G074700 Carya illinoinensis HOM05D000147 ORTHO05D005950 4.1e-08 61.2 54 57.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 5.4e-08 60.8 42 64.3
Prupe.4G014800 Prunus persica HOM05D000147 ORTHO05D005950 1.2e-07 59.7 53 58.5
Actinidia26885 Actinidia chinensis HOM05D000147 ORTHO05D005950 8.6e-06 53.5 33 69.7


User provided reference genes

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