Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33265 Sequoiadendron giganteum HOM05D005715 ORTHO05D007160 0.0e+00 1214.5 613 100.0
SEGI_17393 Sequoiadendron giganteum HOM05D005715 ORTHO05D007160 0.0e+00 1152.5 613 95.4
SEGI_29809 Sequoiadendron giganteum HOM05D005715 ORTHO05D007160 1.2e-30 139.0 341 36.1
Lalb_Chr24g0399501 Lupinus albus HOM05D005715 ORTHO05D007160 9.7e-25 119.4 175 40.6
Pp3c11_8920 Physcomitrium patens HOM05D005715 ORTHO05D007160 6.3e-24 116.7 651 25.0
ATR0739G069 Amborella trichopoda HOM05D005715 ORTHO05D007160 3.1e-23 114.4 145 45.5
Haze_22425 Corylus avellana HOM05D005715 ORTHO05D007160 3.1e-23 114.4 163 42.9
PGR031G1686 Punica granatum HOM05D005715 ORTHO05D007160 4.1e-23 114.0 152 44.1
Pp3c7_18640 Physcomitrium patens HOM05D005715 ORTHO05D007160 1.2e-22 112.5 654 23.7
Cfa013768 Carpinus fangiana HOM05D005715 ORTHO05D007160 1.5e-22 112.1 157 44.6
Lalb_Chr22g0355691 Lupinus albus HOM05D005715 ORTHO05D007160 1.5e-22 112.1 177 40.1
QL05p065482 Quercus lobata HOM05D005715 ORTHO05D007160 2.6e-22 111.3 163 42.9
QL12p038205 Quercus lobata HOM05D005715 ORTHO05D007160 2.6e-22 111.3 163 42.9
Duzib093G0740 Durio zibethinus HOM05D005715 ORTHO05D007160 4.5e-22 110.5 165 43.6
Psat6g017920 Pisum sativum HOM05D005715 ORTHO05D007160 5.0e-21 107.1 148 41.9
Nn1g04537 Nelumbo nucifera HOM05D005715 ORTHO05D007160 6.5e-21 106.7 167 40.1
CAN.G724.34 Capsicum annuum HOM05D005715 ORTHO05D007160 1.1e-20 105.9 165 38.2
Peaxi162Scf00081g00232 Petunia axillaris HOM05D005715 ORTHO05D007160 1.4e-20 105.5 154 40.9
Pp3c7_20380 Physcomitrium patens HOM05D005715 ORTHO05D007160 1.4e-20 105.5 370 26.2
Gorai.009G220700 Gossypium raimondii HOM05D005715 ORTHO05D007160 1.9e-20 105.1 166 41.6
Solyc04g077740.1 Solanum lycopersicum HOM05D005715 ORTHO05D007160 1.9e-20 105.1 151 39.7
MELO3C016824.2 Cucumis melo HOM05D005715 ORTHO05D007160 2.5e-20 104.8 149 42.3
CsaV3_4G035110 Cucumis sativus L. HOM05D005715 ORTHO05D007160 3.2e-20 104.4 174 38.5
Gohir.A05G210700 Gossypium hirsutum HOM05D005715 ORTHO05D007160 3.2e-20 104.4 166 41.6
Mapoly0094s0025 Marchantia polymorpha HOM05D005715 ORTHO05D007160 4.2e-20 104.0 299 31.4
Nitab4.5_0003725g0050 Nicotiana tabacum HOM05D005715 ORTHO05D007160 4.2e-20 104.0 155 40.6
Sopen04g031360 Solanum pennellii HOM05D005715 ORTHO05D007160 4.2e-20 104.0 151 39.1
MBI16_g02456_MAGBIO Magnolia biondii HOM05D005715 ORTHO05D007160 5.5e-20 103.6 155 38.1
Potri.014G015300 Populus trichocarpa HOM05D005715 ORTHO05D007160 5.5e-20 103.6 157 40.1
Sabra02G0092400 Salix brachista HOM05D005715 ORTHO05D007160 5.5e-20 103.6 153 41.8
PGSC0003DMG400010622 Solanum tuberosum HOM05D005715 ORTHO05D007160 5.5e-20 103.6 150 40.0
Gohir.D05G214000 Gossypium hirsutum HOM05D005715 ORTHO05D007160 7.2e-20 103.2 166 40.4
Medtr1g017920 Medicago truncatula HOM05D005715 ORTHO05D007160 7.2e-20 103.2 175 39.4
Nn5g30612 Nelumbo nucifera HOM05D005715 ORTHO05D007160 7.2e-20 103.2 145 38.6
Nitab4.5_0000497g0110 Nicotiana tabacum HOM05D005715 ORTHO05D007160 7.2e-20 103.2 155 40.6
PSO675G4043 Papaver somniferum HOM05D005715 ORTHO05D007160 7.2e-20 103.2 146 39.0
Lj1g0016682 Lotus japonicus HOM05D005715 ORTHO05D007160 9.4e-20 102.8 152 38.8
PSO541G4157 Papaver somniferum HOM05D005715 ORTHO05D007160 9.4e-20 102.8 161 37.3
Potri.002G117700 Populus trichocarpa HOM05D005715 ORTHO05D007160 9.4e-20 102.8 153 43.1
Prupe.1G421700 Prunus persica HOM05D005715 ORTHO05D007160 9.4e-20 102.8 165 38.2
COL.COLO4_28493 Corchorus olitorius HOM05D005715 ORTHO05D007160 1.2e-19 102.4 148 41.9
Eucgr.F02242 Eucalyptus grandis HOM05D005715 ORTHO05D007160 1.6e-19 102.1 174 36.8
Oeu053093.1 Olea europaea HOM05D005715 ORTHO05D007160 1.6e-19 102.1 168 37.5
Thecc.08G087700 Theobroma cacao HOM05D005715 ORTHO05D007160 1.6e-19 102.1 163 39.9
ClCG05G020660 Citrullus lanatus HOM05D005715 ORTHO05D007160 3.6e-19 100.9 184 38.6
Sc02g0007950 Simmondsia chinensis HOM05D005715 ORTHO05D007160 3.6e-19 100.9 146 39.7
TPR.G825 Trifolium pratense HOM05D005715 ORTHO05D007160 4.7e-19 100.5 226 34.5
CiPaw.08G050600 Carya illinoinensis HOM05D005715 ORTHO05D007160 1.8e-18 98.6 172 40.1
Gohir.D06G021600 Gossypium hirsutum HOM05D005715 ORTHO05D007160 1.8e-18 98.6 148 39.9
Gorai.010G026200 Gossypium raimondii HOM05D005715 ORTHO05D007160 1.8e-18 98.6 148 39.9
Dinv44948 Davidia involucrata HOM05D005715 ORTHO05D007160 2.3e-18 98.2 145 38.6
Actinidia10205 Actinidia chinensis HOM05D005715 ORTHO05D007160 3.0e-18 97.8 161 38.5
Lj5g0027881 Lotus japonicus HOM05D005715 ORTHO05D007160 3.0e-18 97.8 165 38.2
FAN15G0086 Fragaria x ananassa HOM05D005715 ORTHO05D007160 3.9e-18 97.4 154 37.7
TWI12G0318 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 3.9e-18 97.4 163 38.7
Manes.18G047200 Manihot esculenta HOM05D005715 ORTHO05D007160 5.2e-18 97.1 170 37.6
Oeu053625.1 Olea europaea HOM05D005715 ORTHO05D007160 5.2e-18 97.1 153 39.9
Aqoxy6G02590 Aquilegia oxysepala HOM05D005715 ORTHO05D007160 6.7e-18 96.7 230 31.3
FAN27G0384 Fragaria x ananassa HOM05D005715 ORTHO05D007160 6.7e-18 96.7 159 37.7
Phvul.001G028500 Phaseolus vulgaris HOM05D005715 ORTHO05D007160 6.7e-18 96.7 163 37.4
Pp3c11_8450 Physcomitrium patens HOM05D005715 ORTHO05D007160 6.7e-18 96.7 405 25.4
CSS0034937 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 8.8e-18 96.3 172 39.0
CSS0039747 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 8.8e-18 96.3 172 39.0
RcHm_v2.0_Chr6g0309781 Rosa chinensis HOM05D005715 ORTHO05D007160 8.8e-18 96.3 158 37.3
Sed0026939 Sechium edule HOM05D005715 ORTHO05D007160 8.8e-18 96.3 142 37.3
Glyma.17G234300 Glycine max HOM05D005715 ORTHO05D007160 1.1e-17 95.9 150 38.0
TAR628G0320 Trochodendron aralioides HOM05D005715 ORTHO05D007160 1.1e-17 95.9 224 33.0
FAN20G0332 Fragaria x ananassa HOM05D005715 ORTHO05D007160 1.5e-17 95.5 152 38.2
Rhsim06G0062800 Rhododendron simsii HOM05D005715 ORTHO05D007160 1.5e-17 95.5 171 37.4
Dinv39217 Davidia involucrata HOM05D005715 ORTHO05D007160 2.0e-17 95.1 152 40.1
FvH4_2g32940 Fragaria vesca HOM05D005715 ORTHO05D007160 2.0e-17 95.1 163 37.4
FAN24G0894 Fragaria x ananassa HOM05D005715 ORTHO05D007160 2.0e-17 95.1 163 37.4
Hma1.2p1_0819F.1_g223600 Hydrangea macrophylla HOM05D005715 ORTHO05D007160 2.6e-17 94.7 169 37.9
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 3.3e-17 94.4 144 38.2
TWI56G0918 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 3.3e-17 94.4 164 36.0
CANSAT25G3138 Cannabis sativa HOM05D005715 ORTHO05D007160 5.7e-17 93.6 153 40.5
MD08G1080800 Malus domestica HOM05D005715 ORTHO05D007160 5.7e-17 93.6 150 38.0
Cpa.g.sc142.38 Carica papaya HOM05D005715 ORTHO05D007160 7.4e-17 93.2 187 33.7
THA.LOC104825782 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 7.4e-17 93.2 158 38.6
Aa31LG7G10200 Aethionema arabicum HOM05D005715 ORTHO05D007160 9.7e-17 92.8 159 36.5
THA.LOC104825172 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 9.7e-17 92.8 154 40.3
Ciclev10001560m.g Citrus clementina HOM05D005715 ORTHO05D007160 1.3e-16 92.4 156 41.0
Lj4C71T16 Lonicera japonica HOM05D005715 ORTHO05D007160 1.7e-16 92.0 169 36.1
SHI08419 Sapria himalayana HOM05D005715 ORTHO05D000023 1.7e-16 92.0 136 41.2
Sed0010783 Sechium edule HOM05D005715 ORTHO05D007160 1.7e-16 92.0 153 40.5
HPP92_024906 Vanilla planifolia HOM05D005715 ORTHO05D007160 1.7e-16 92.0 159 36.5
AUR62022469 Chenopodium quinoa HOM05D005715 ORTHO05D007160 2.8e-16 91.3 143 37.8
Glyma.14G089033 Glycine max HOM05D005715 ORTHO05D007160 3.7e-16 90.9 148 37.8
Hma1.2p1_3250F.1_g334460 Hydrangea macrophylla HOM05D005715 ORTHO05D007160 3.7e-16 90.9 167 37.1
VMungo0647G0294 Vigna mungo HOM05D005715 ORTHO05D007160 3.7e-16 90.9 150 38.7
BraA08t34576Z Brassica rapa HOM05D005715 ORTHO05D007160 4.8e-16 90.5 155 38.1
Os07g0585700 Oryza sativa ssp. japonica HOM05D005715 ORTHO05D007160 4.8e-16 90.5 147 33.3
Lalb_Chr14g0368141 Lupinus albus HOM05D005715 ORTHO05D007160 8.2e-16 89.7 174 36.2
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 1.1e-15 89.4 144 40.3
SGA_v2.0_scaffold28G11837 Striga asiatica HOM05D005715 ORTHO05D007160 1.4e-15 89.0 140 37.1
Thhalv10009308m.g Eutrema salsugineum HOM05D005715 ORTHO05D007160 2.4e-15 88.2 160 38.8
arahy.Tifrunner.gnm1.ann1.42CAD1 Arachis hypogaea HOM05D005715 ORTHO05D007160 3.1e-15 87.8 179 35.8
BcaC01g01604 Brassica carinata HOM05D005715 ORTHO05D007160 3.1e-15 87.8 143 39.2
BcaC01g06948 Brassica carinata HOM05D005715 ORTHO05D007160 3.1e-15 87.8 159 37.1
MSTRG.22219 Avicennia marina HOM05D005715 ORTHO05D007160 4.1e-15 87.4 148 35.8
AL1G40890 Arabidopsis lyrata HOM05D005715 ORTHO05D007160 5.3e-15 87.0 148 39.2
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 5.3e-15 87.0 143 39.2
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 5.3e-15 87.0 143 39.2
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 5.3e-15 87.0 143 39.2
CARHR027070 Cardamine hirsuta HOM05D005715 ORTHO05D007160 7.0e-15 86.7 177 34.5
SalBow2G0154 Salvia bowleyana HOM05D005715 ORTHO05D007160 9.1e-15 86.3 144 38.9
BcaC05g26566 Brassica carinata HOM05D005715 ORTHO05D007160 1.6e-14 85.5 143 39.2
A08p26250 Brassica napus HOM05D005715 ORTHO05D007160 1.6e-14 85.5 157 38.2
EL10Ac1g02368 Beta vulgaris HOM05D005715 ORTHO05D007160 2.0e-14 85.1 145 36.6
Carub.0001s2602 Capsella rubella HOM05D005715 ORTHO05D007160 2.0e-14 85.1 150 38.0
Zm00001eb108020 Zea mays HOM05D005715 ORTHO05D007160 2.0e-14 85.1 160 35.6
Zm00001eb325870 Zea mays HOM05D005715 ORTHO05D007160 2.0e-14 85.1 185 34.1
AUR62037422 Chenopodium quinoa HOM05D005715 ORTHO05D007160 2.6e-14 84.7 151 35.8
Sp1g23710 Schrenkiella parvula HOM05D005715 ORTHO05D007160 2.6e-14 84.7 146 39.7
C03p74190 Brassica napus HOM05D005715 ORTHO05D007160 3.5e-14 84.3 143 38.5
arahy.Tifrunner.gnm1.ann1.3URM83 Arachis hypogaea HOM05D005715 ORTHO05D009860 4.5e-14 84.0 164 37.2
MSTRG.24379 Avicennia marina HOM05D005715 ORTHO05D007160 4.5e-14 84.0 149 36.2
Duzib041G0674 Durio zibethinus HOM05D005715 ORTHO05D007160 4.5e-14 84.0 100 46.0
Gohir.A06G024500 Gossypium hirsutum HOM05D005715 ORTHO05D007160 5.9e-14 83.6 130 38.5
AT1G27461 Arabidopsis thaliana HOM05D005715 ORTHO05D007160 7.7e-14 83.2 149 38.3
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 1.0e-13 82.8 138 39.1
Ah.05g167050 Amaranthus hybridus HOM05D005715 ORTHO05D007160 2.2e-13 81.6 211 34.1
SGA_v2.0_scaffold152G36807 Striga asiatica HOM05D005715 ORTHO05D007160 8.5e-13 79.7 142 34.5
GSVIVG01009335001 Vitis vinifera HOM05D005715 ORTHO05D007160 2.5e-12 78.2 79 49.4
unitig_744.g24126 Utricularia gibba HOM05D005715 ORTHO05D007160 7.2e-12 76.6 157 36.3
CDE09G1341 Ceratophyllum demersum HOM05D001735 ORTHO05D001640 4.7e-11 73.9 161 30.4
BcaC01g01609 Brassica carinata HOM05D005715 ORTHO05D007160 1.8e-10 72.0 113 38.1
SMO367G1253 Selaginella moellendorffii HOM05D005715 ORTHO05D007160 1.8e-10 72.0 224 26.8
CDE07G0728 Ceratophyllum demersum HOM05D001735 ORTHO05D001640 2.3e-10 71.6 201 32.3
BcaC05g26750 Brassica carinata HOM05D005715 ORTHO05D007160 4.0e-10 70.9 82 48.8
CDE04G1528 Ceratophyllum demersum HOM05D001735 ORTHO05D001640 4.0e-10 70.9 201 31.3
unitig_21.g20630 Utricularia gibba HOM05D005715 ORTHO05D007160 4.0e-10 70.9 151 34.4
PSO063G3829 Papaver somniferum HOM05D001735 ORTHO05D001640 5.2e-10 70.5 145 33.8
ATR0609G089 Amborella trichopoda HOM05D001735 ORTHO05D001640 8.8e-10 69.7 149 30.9
PSO063G5781 Papaver somniferum HOM05D001735 ORTHO05D001640 1.2e-09 69.3 145 33.1
PSO063G6933 Papaver somniferum HOM05D001735 ORTHO05D001640 1.2e-09 69.3 145 33.1
PSO170G3003 Papaver somniferum HOM05D001735 ORTHO05D001640 1.2e-09 69.3 145 33.1
PSO210G1866 Papaver somniferum HOM05D001735 ORTHO05D001640 1.2e-09 69.3 145 33.1
PSO339G0231 Papaver somniferum HOM05D001735 ORTHO05D001640 1.2e-09 69.3 145 33.1
DCAR_008858 Daucus carota HOM05D005715 ORTHO05D007160 2.0e-09 68.6 123 39.8
HanXRQChr15g0495001 Helianthus annuus HOM05D005715 ORTHO05D007160 2.6e-09 68.2 190 30.5
Ciclev10021486m.g Citrus clementina HOM05D001735 ORTHO05D001640 3.3e-09 67.8 144 31.2
PSO170G3598 Papaver somniferum HOM05D001735 ORTHO05D001640 3.3e-09 67.8 145 32.4
Potri.012G094400 Populus trichocarpa HOM05D001735 ORTHO05D001640 3.3e-09 67.8 153 30.1
Dinv11099 Davidia involucrata HOM05D001735 ORTHO05D001640 4.4e-09 67.4 146 31.5
Atru.chr9.1025 Acer truncatum HOM05D001735 ORTHO05D001640 9.7e-09 66.2 148 31.8
Potri.015G091900 Populus trichocarpa HOM05D001735 ORTHO05D001640 9.7e-09 66.2 155 30.3
Aqoxy5G03520 Aquilegia oxysepala HOM05D001735 ORTHO05D001640 1.3e-08 65.9 141 32.6
TAR622G0673 Trochodendron aralioides HOM05D001735 ORTHO05D001640 2.2e-08 65.1 174 29.3
CSS0016125 Camellia sinensis var. sinensis HOM05D001735 ORTHO05D001640 2.8e-08 64.7 192 27.6
DCAR_012819 Daucus carota HOM05D005715 ORTHO05D007160 2.8e-08 64.7 151 30.5
Dinv04851 Davidia involucrata HOM05D001735 ORTHO05D001640 4.8e-08 63.9 147 32.0
Nn4g22410 Nelumbo nucifera HOM05D001735 ORTHO05D001640 4.8e-08 63.9 140 32.1
Sabra12G0069000 Salix brachista HOM05D001735 ORTHO05D001640 6.3e-08 63.5 149 30.2
PSO782G3763 Papaver somniferum HOM05D001735 ORTHO05D001640 1.1e-07 62.8 145 31.0
Lj4P757T25 Lonicera japonica HOM05D005715 ORTHO05D007160 1.4e-07 62.4 146 29.5
TAR374G1031 Trochodendron aralioides HOM05D001735 ORTHO05D001640 1.4e-07 62.4 203 25.6
Cpa.g.sc4.106 Carica papaya HOM05D001735 ORTHO05D001640 1.8e-07 62.0 138 29.7
Lj5C98T5 Lonicera japonica HOM05D001735 ORTHO05D001640 1.8e-07 62.0 135 29.6
Nitab4.5_0010847g0010 Nicotiana tabacum HOM05D001735 ORTHO05D001640 4.1e-07 60.8 142 28.9
Zm00001eb020940 Zea mays HOM05D005715 ORTHO05D007160 9.1e-07 59.7 154 33.1
Duzib084G1429 Durio zibethinus HOM05D001735 ORTHO05D001640 1.2e-06 59.3 143 28.0
Manes.14G054200 Manihot esculenta HOM05D001735 ORTHO05D001640 1.2e-06 59.3 151 31.8
Sabra15G0113700 Salix brachista HOM05D001735 ORTHO05D001640 1.6e-06 58.9 149 27.5
CAN.G352.36 Capsicum annuum HOM05D001735 ORTHO05D001640 2.7e-06 58.2 72 40.3
Sopen03g030250 Solanum pennellii HOM05D001735 ORTHO05D001640 2.7e-06 58.2 72 43.1
TAR629G1382 Trochodendron aralioides HOM05D001735 ORTHO05D001640 2.7e-06 58.2 68 39.7
HPP92_021372 Vanilla planifolia HOM05D001735 ORTHO05D001640 2.7e-06 58.2 144 25.0
ECA232G0180 Erigeron canadensis HOM05D005715 ORTHO05D007160 3.5e-06 57.8 197 27.4
Nitab4.5_0001664g0080 Nicotiana tabacum HOM05D001735 ORTHO05D001640 4.5e-06 57.4 142 28.2
Actinidia08859 Actinidia chinensis HOM05D001735 ORTHO05D001640 5.9e-06 57.0 175 25.7
DCAR_007476 Daucus carota HOM05D001735 ORTHO05D001640 5.9e-06 57.0 194 26.3
MBI11_g00913_MAGBIO Magnolia biondii HOM05D001735 ORTHO05D001640 7.7e-06 56.6 139 25.9


User provided reference genes

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