Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 0.0e+00 1357.8 667 100.0
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 1.3e-187 660.6 657 52.4
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 5.4e-178 628.6 678 49.9
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 3.5e-177 625.9 661 50.2
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 3.5e-177 625.9 678 49.4
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 5.9e-177 625.2 674 50.0
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 2.2e-176 623.2 655 50.2
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 2.9e-176 622.9 622 52.3
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 7.2e-175 618.2 662 49.5
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 9.4e-175 617.8 665 49.5
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 9.4e-175 617.8 664 50.0
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.2e-174 617.5 660 50.5
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 3.6e-174 615.9 664 48.9
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 4.7e-174 615.5 674 50.0
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.8e-173 613.6 660 50.3
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 3.0e-173 612.8 667 49.2
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 2.0e-172 610.1 663 48.3
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 3.4e-172 609.4 663 50.5
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 3.7e-171 605.9 659 49.6
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 8.3e-171 604.7 659 49.8
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 4.1e-170 602.4 671 48.7
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 1.3e-168 597.4 672 48.7
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 1.7e-168 597.0 661 49.5
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 3.8e-168 595.9 669 47.2
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 1.5e-167 594.0 673 47.4
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 1.5e-167 594.0 656 49.1
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 4.3e-167 592.4 655 48.7
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 5.6e-167 592.0 660 49.2
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 7.2e-167 591.7 655 49.6
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 1.2e-166 590.9 671 46.9
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 1.6e-166 590.5 661 48.9
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 2.8e-166 589.7 682 47.5
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 2.8e-166 589.7 658 47.7
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 8.0e-166 588.2 673 47.1
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 8.0e-166 588.2 662 48.6
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 8.0e-166 588.2 673 47.5
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 4.0e-165 585.9 680 47.1
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 5.2e-165 585.5 660 48.3
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 6.8e-165 585.1 670 47.6
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 4.4e-164 582.4 685 45.1
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 5.7e-164 582.0 665 46.8
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 3.7e-163 579.3 677 46.7
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 4.9e-163 578.9 660 47.6
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 8.3e-163 578.2 667 47.1
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 8.3e-163 578.2 658 45.3
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 1.4e-162 577.4 660 47.7
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 4.1e-162 575.9 662 47.4
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 5.4e-162 575.5 666 44.7
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 7.0e-162 575.1 660 47.4
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 9.2e-162 574.7 655 47.2
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 3.5e-161 572.8 656 48.0
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 1.3e-160 570.9 672 47.8
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 2.3e-160 570.1 655 47.5
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 3.0e-160 569.7 667 48.0
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 3.9e-160 569.3 656 48.0
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 5.0e-160 568.9 679 46.1
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 6.6e-160 568.5 659 48.4
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 8.6e-160 568.2 679 46.7
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.3e-159 565.1 735 41.6
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 9.5e-159 564.7 672 46.1
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 1.2e-156 557.8 668 47.5
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 2.0e-156 557.0 679 45.4
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 1.1e-154 551.2 715 45.9
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 2.4e-154 550.1 672 45.2
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 7.0e-154 548.5 717 44.8
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 2.3e-152 543.5 661 45.7
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 6.6e-152 542.0 682 46.3
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 1.5e-151 540.8 688 43.5
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 3.3e-151 539.7 675 44.4
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 3.3e-151 539.7 679 46.1
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 1.5e-148 530.8 678 44.0
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 1.5e-148 530.8 514 54.9
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 1.3e-147 527.7 638 44.4
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 1.7e-147 527.3 659 45.7
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 6.4e-147 525.4 680 43.4
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 2.7e-145 520.0 675 42.8
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 7.8e-145 518.5 700 41.3
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 2.3e-144 516.9 678 43.2
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 3.9e-144 516.2 678 43.2
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 8.6e-144 515.0 676 42.9
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 1.5e-143 514.2 676 42.8
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 9.5e-143 511.5 657 43.4
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 1.5e-140 504.2 664 42.0
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 9.9e-140 501.5 656 43.8
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 2.7e-137 493.4 662 42.4
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 3.9e-136 489.6 477 54.3
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 8.6e-136 488.4 510 51.8
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 1.2e-134 484.6 667 43.2
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 3.6e-134 483.0 528 49.8
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 6.8e-133 478.8 673 41.6
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 2.0e-132 477.2 683 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 2.9e-131 473.4 669 41.9
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 2.4e-130 470.3 659 41.7
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 2.1e-113 414.1 657 38.4
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 3.5e-113 413.3 622 40.5
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 5.1e-112 409.5 527 46.3
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 4.8e-110 402.9 530 45.3
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 1.6e-94 351.3 398 47.2
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.4e-85 321.6 549 37.9
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 9.1e-85 318.9 470 39.6
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 2.7e-73 280.8 240 61.2
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 9.1e-69 265.8 394 40.9
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 1.8e-45 188.3 388 35.3
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 4.1e-45 187.2 407 32.7
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 2.2e-30 138.3 92 69.6
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.6e-28 132.1 230 31.7
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 6.0e-28 130.2 171 38.0
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.3e-27 129.0 145 42.8
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 5.2e-24 117.1 87 65.5
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 7.8e-20 103.2 111 52.3
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 4.7e-17 94.0 108 46.3
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 5.8e-15 87.0 162 35.8
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.7e-14 85.5 225 25.8
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 2.9e-14 84.7 94 42.6
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 4.8e-09 67.4 67 53.7
BcaB04g20870 Brassica carinata HOM05D006559 ORTHO05D019951 9.0e-08 63.2 76 43.4
BcaC01g05501 Brassica carinata HOM05D006559 ORTHO05D019951 2.2e-06 58.5 78 42.3


User provided reference genes

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