Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.7e-48 195.7 100 100.0
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 6.2e-14 80.9 66 57.6
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 4.0e-13 78.2 77 48.1
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 4.0e-13 78.2 75 50.7
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 4.0e-13 78.2 73 53.4
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 6.9e-13 77.4 68 54.4
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 6.9e-13 77.4 73 49.3
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 6.9e-13 77.4 75 52.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.6e-12 75.5 76 48.7
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 4.5e-12 74.7 64 53.1
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 5.8e-12 74.3 75 50.7
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 5.8e-12 74.3 65 52.3
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 7.6e-12 73.9 70 55.7
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.0e-11 73.6 75 45.3
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.3e-11 73.2 77 49.4
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 1.3e-11 73.2 77 49.4
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 2.2e-11 72.4 65 53.8
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 2.2e-11 72.4 74 47.3
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 3.8e-11 71.6 67 52.2
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 4.9e-11 71.2 67 49.3
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 4.9e-11 71.2 77 48.1
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 4.9e-11 71.2 67 47.8
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 4.9e-11 71.2 67 49.3
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 6.5e-11 70.9 67 50.7
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 8.4e-11 70.5 66 45.5
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 8.4e-11 70.5 75 45.3
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 1.1e-10 70.1 66 47.0
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 1.1e-10 70.1 65 49.2
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.4e-10 69.7 65 50.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.9e-10 69.3 67 50.7
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 1.9e-10 69.3 65 49.2
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.9e-10 69.3 64 48.4
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.5e-10 68.9 77 45.5
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.5e-10 68.9 65 49.2
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.5e-10 68.9 65 49.2
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 2.5e-10 68.9 69 47.8
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 2.5e-10 68.9 75 46.7
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.5e-10 68.9 74 47.3
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.5e-10 68.9 67 50.7
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.2e-10 68.6 65 46.2
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 4.2e-10 68.2 74 48.6
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 5.5e-10 67.8 65 50.8
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 5.5e-10 67.8 75 45.3
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 5.5e-10 67.8 65 52.3
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 5.5e-10 67.8 75 46.7
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 5.5e-10 67.8 64 48.4
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 5.5e-10 67.8 65 50.8
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 7.1e-10 67.4 65 49.2
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 7.1e-10 67.4 67 49.3
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.1e-10 67.4 71 46.5
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 9.3e-10 67.0 75 45.3
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.2e-09 66.6 76 42.1
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.2e-09 66.6 76 46.1
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.2e-09 66.6 65 49.2
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.6e-09 66.2 75 42.7
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.1e-09 65.9 67 47.8
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.1e-09 65.9 67 47.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.1e-09 65.9 69 50.7
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 2.1e-09 65.9 65 49.2
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.7e-09 65.5 65 46.2
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.7e-09 65.5 65 49.2
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 4.6e-09 64.7 65 49.2
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 4.6e-09 64.7 65 50.8
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 4.6e-09 64.7 76 40.8
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 4.6e-09 64.7 53 60.4
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 6.0e-09 64.3 66 47.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 6.0e-09 64.3 65 50.8
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 6.0e-09 64.3 63 49.2
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 7.9e-09 63.9 75 45.3
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.0e-08 63.5 67 46.3
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.0e-08 63.5 75 44.0
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.3e-08 63.2 65 41.5
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 1.3e-08 63.2 65 43.1
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.3e-08 63.2 65 44.6
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.8e-08 62.8 65 44.6
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.8e-08 62.8 65 44.6
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.8e-08 62.8 72 43.1
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.8e-08 62.8 65 44.6
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.8e-08 62.8 64 43.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 2.3e-08 62.4 65 44.6
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 3.9e-08 61.6 72 43.1
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 5.1e-08 61.2 75 44.0
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 5.1e-08 61.2 94 36.2
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 6.7e-08 60.8 57 49.1
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 6.7e-08 60.8 75 44.0
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.1e-07 60.1 73 45.2
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.1e-07 60.1 72 40.3
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.3e-07 58.5 72 47.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 3.3e-07 58.5 67 41.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.3e-07 58.5 49 57.1
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 4.3e-07 58.2 73 43.8
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.8e-06 55.5 57 49.1


User provided reference genes

Program Settings