Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33065 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 2.0e-184 649.0 346 100.0
SEGI_35842 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 1.9e-57 227.3 308 50.6
SEGI_02683 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 8.1e-53 211.8 304 48.4
SEGI_02589 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 4.5e-43 179.5 307 43.0
SEGI_36068 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 7.1e-41 172.2 340 41.2
SEGI_37281 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 9.6e-30 135.2 172 50.0
SEGI_07158 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 2.0e-27 127.5 392 32.9
SEGI_24859 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 2.0e-27 127.5 392 32.9
SEGI_14600 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 6.3e-21 105.9 150 46.0
SEGI_33659 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 6.3e-21 105.9 203 42.4
SEGI_22350 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 8.2e-21 105.5 246 35.8
SEGI_22342 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 5.3e-20 102.8 367 30.5
SEGI_27462 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 1.2e-19 101.7 292 35.6
SEGI_22455 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 1.4e-15 88.2 73 61.6
SEGI_14226 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 3.9e-15 86.7 166 43.4
SEGI_05749 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 1.7e-13 81.3 287 32.1
SEGI_30327 Sequoiadendron giganteum HOM05D000014 ORTHO05D010678 1.4e-12 78.2 233 31.3
SEGI_34178 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 1.4e-12 78.2 151 42.4
SEGI_27854 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 1.8e-12 77.8 138 39.1
SEGI_25282 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 2.6e-11 73.9 45 71.1
SEGI_22744 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 1.0e-10 72.0 68 51.5
SEGI_30227 Sequoiadendron giganteum HOM05D001751 ORTHO05D001672 1.4e-09 68.2 45 68.9
SEGI_06107 Sequoiadendron giganteum HOM05D009575 ORTHO05D000044 3.2e-09 67.0 109 52.3
SEGI_23331 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 7.2e-09 65.9 149 37.6
SEGI_27274 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 1.2e-08 65.1 40 67.5
THA.LOC104806089 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.6e-08 64.7 107 31.8
THA.LOC104810564 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 3.6e-08 63.5 91 35.2
THA.LOC104810565 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 4.7e-08 63.2 91 35.2
THA.LOC104809693 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 6.1e-08 62.8 91 34.1
THA.LOC109116039 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 6.1e-08 62.8 111 30.6
THA.LOC109116044 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 7.9e-08 62.4 111 30.6
THA.LOC104821179 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.0e-07 62.0 91 34.1
THA.LOC109116284 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.4e-07 61.6 91 33.0
THA.LOC109116506 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.4e-07 61.6 111 30.6
THA.LOC109116554 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 3.0e-07 60.5 91 33.0
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 3.9e-07 60.1 48 52.1
SEGI_00095 Sequoiadendron giganteum HOM05D009575 ORTHO05D000093 5.1e-07 59.7 40 62.5
arahy.Tifrunner.gnm1.ann1.41XP9B Arachis hypogaea HOM05D000014 ORTHO05D000093 6.7e-07 59.3 64 42.2
FvH4_3g31361 Fragaria vesca HOM05D000047 ORTHO05D000044 8.8e-07 58.9 48 50.0
SEGI_13078 Sequoiadendron giganteum HOM05D000014 ORTHO05D000093 8.8e-07 58.9 128 33.6
SEGI_24632 Sequoiadendron giganteum HOM05D009575 ORTHO05D000016 8.8e-07 58.9 56 62.5
THA.LOC104798657 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 8.8e-07 58.9 111 28.8
ECA240G3041 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.0e-06 57.8 53 54.7
RcHm_v2.0_Chr2g0132971 Rosa chinensis HOM05D000014 ORTHO05D000093 2.6e-06 57.4 53 47.2
RcHm_v2.0_Chr3g0469711 Rosa chinensis HOM05D000014 ORTHO05D000093 2.6e-06 57.4 53 47.2
RcHm_v2.0_Chr7g0193951 Rosa chinensis HOM05D000014 ORTHO05D000093 2.6e-06 57.4 53 47.2
arahy.Tifrunner.gnm1.ann1.HZP7J5 Arachis hypogaea HOM05D000014 ORTHO05D000093 3.3e-06 57.0 57 43.9
Ca_05037_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 3.3e-06 57.0 50 48.0
arahy.Tifrunner.gnm1.ann1.54GGN4 Arachis hypogaea HOM05D000014 ORTHO05D000093 4.4e-06 56.6 57 45.6
ECA048G0001 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA232G1809 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA232G3266 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA232G4102 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA232G4103 Erigeron canadensis HOM05D000508 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA232G4513 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA233G2865 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA233G3450 Erigeron canadensis HOM05D000006 ORTHO05D010592 4.4e-06 56.6 48 56.2
ECA236G4709 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 53 54.7
ECA238G1422 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA240G1231 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA240G4561 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA246G2406 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA247G3828 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA289G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA292G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
ECA294G0001 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 56.2
RcHm_v2.0_Chr5g0043631 Rosa chinensis HOM05D000014 ORTHO05D000093 4.4e-06 56.6 48 52.1
THA.LOC104807112 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 4.4e-06 56.6 91 33.0
RcHm_v2.0_Chr2g0130421 Rosa chinensis HOM05D000014 ORTHO05D000093 5.7e-06 56.2 48 52.1
RcHm_v2.0_Chr4g0404441 Rosa chinensis HOM05D000014 ORTHO05D000093 5.7e-06 56.2 48 52.1
Sopen04g015920 Solanum pennellii HOM05D000014 ORTHO05D000093 5.7e-06 56.2 62 43.5
Sopen05g012350 Solanum pennellii HOM05D000014 ORTHO05D000093 7.4e-06 55.8 67 40.3
Sopen12g024790 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-06 55.8 92 29.3
TWI31G1456 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.4e-06 55.8 52 48.1
TWI56G0386 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.4e-06 55.8 52 48.1
TWI73G0811 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.4e-06 55.8 52 48.1
ECA238G1304 Erigeron canadensis HOM05D000014 ORTHO05D000093 9.7e-06 55.5 48 56.2
PGR026G0001 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR031G0941 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR031G3167 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR031G3886 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR042G1222 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR102G0160 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR102G1139 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
PGR142G4208 Punica granatum HOM05D000014 ORTHO05D000093 9.7e-06 55.5 87 32.2
Sopen10g012780 Solanum pennellii HOM05D000014 ORTHO05D000093 9.7e-06 55.5 66 40.9
Sopen11g018730 Solanum pennellii HOM05D000014 ORTHO05D000093 9.7e-06 55.5 67 38.8


User provided reference genes

Program Settings