Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 6.0e-49 197.2 101 100.0
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 5.9e-36 154.1 78 100.0
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 1.4e-21 106.3 72 70.8
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 1.4e-21 106.3 75 70.7
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 5.3e-21 104.4 72 72.2
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 6.9e-21 104.0 75 68.0
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 9.1e-21 103.6 73 65.8
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 1.2e-20 103.2 85 60.0
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.2e-20 103.2 75 68.0
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 1.2e-20 103.2 76 69.7
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.4e-20 101.7 71 70.4
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 3.4e-20 101.7 70 68.6
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 3.4e-20 101.7 71 67.6
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 4.5e-20 101.3 72 66.7
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 5.9e-20 100.9 65 73.8
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 5.9e-20 100.9 71 67.6
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 5.9e-20 100.9 71 67.6
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 1.3e-19 99.8 73 68.5
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.3e-19 99.8 75 65.3
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.7e-19 99.4 73 65.8
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 1.7e-19 99.4 81 59.3
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 2.2e-19 99.0 72 63.9
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 2.9e-19 98.6 72 65.3
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 2.9e-19 98.6 81 58.0
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 3.8e-19 98.2 73 65.8
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.8e-19 98.2 77 64.9
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 3.8e-19 98.2 72 65.3
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 3.8e-19 98.2 72 66.7
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 5.0e-19 97.8 73 65.8
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 5.0e-19 97.8 72 66.7
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 8.5e-19 97.1 73 61.6
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 8.5e-19 97.1 71 64.8
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 8.5e-19 97.1 77 61.0
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.1e-18 96.7 72 59.7
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 1.1e-18 96.7 71 66.2
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 1.1e-18 96.7 86 54.7
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 1.1e-18 96.7 71 63.4
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 1.4e-18 96.3 71 66.2
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 1.9e-18 95.9 73 60.3
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 7.2e-18 94.0 73 63.0
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 9.4e-18 93.6 71 64.8
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 1.2e-17 93.2 72 61.1
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 1.6e-17 92.8 73 61.6
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.6e-17 92.8 71 63.4
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 1.6e-17 92.8 71 67.6
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 2.1e-17 92.4 71 64.8
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 2.7e-17 92.0 72 61.1
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 2.7e-17 92.0 72 61.1
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 2.7e-17 92.0 78 57.7
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 3.6e-17 91.7 77 57.1
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 7.9e-17 90.5 72 59.7
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 1.4e-16 89.7 76 57.9
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 2.3e-16 89.0 89 56.2
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 2.3e-16 89.0 61 68.9
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 8.8e-16 87.0 72 56.9
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 8.8e-16 87.0 66 63.6
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 1.1e-15 86.7 92 52.2
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.1e-15 86.7 77 57.1
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 2.0e-15 85.9 74 58.1
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 2.0e-15 85.9 78 57.7
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 2.0e-15 85.9 72 55.6
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 2.0e-15 85.9 71 57.7
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 4.4e-15 84.7 92 52.2
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 7.4e-15 84.0 92 51.1
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.3e-14 83.2 97 48.5
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 1.3e-14 83.2 74 56.8
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 2.8e-14 82.0 96 50.0
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 4.8e-14 81.3 92 48.9
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 6.3e-14 80.9 92 48.9
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.1e-13 80.1 56 67.9
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.1e-13 80.1 56 67.9
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 1.1e-13 80.1 78 51.3
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 5.3e-13 77.8 92 47.8
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 9.1e-13 77.0 76 55.3
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 2.0e-12 75.9 71 52.1
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 7.7e-12 73.9 57 64.9
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.7e-11 72.8 77 49.4
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 1.1e-10 70.1 70 52.9
DCAR_024676 Daucus carota HOM05D007721 ORTHO05D009811 2.8e-06 55.5 57 49.1
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 3.7e-06 55.1 60 45.0


User provided reference genes

Program Settings