Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 2.2e-149 532.3 277 100.0
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 1.3e-37 161.0 243 40.7
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 1.9e-36 157.1 250 42.8
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 2.5e-36 156.8 236 43.2
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 3.2e-36 156.4 255 39.2
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 1.6e-35 154.1 218 44.5
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 2.1e-35 153.7 258 40.7
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 2.1e-35 153.7 236 41.5
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 3.6e-35 152.9 244 40.2
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 4.7e-35 152.5 250 40.0
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 4.7e-35 152.5 258 40.3
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 6.1e-35 152.1 249 39.4
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 1.0e-34 151.4 254 40.9
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 1.4e-34 151.0 250 39.6
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.8e-34 150.6 255 38.8
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 1.8e-34 150.6 243 40.3
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 1.8e-34 150.6 247 41.3
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 3.0e-34 149.8 239 39.7
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 4.0e-34 149.4 245 40.4
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 4.0e-34 149.4 252 40.9
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 4.0e-34 149.4 239 40.6
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 5.2e-34 149.1 242 42.6
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 6.7e-34 148.7 252 40.1
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 8.8e-34 148.3 239 39.7
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 1.2e-33 147.9 252 38.9
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 1.5e-33 147.5 236 39.4
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 1.5e-33 147.5 254 39.0
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.0e-33 147.1 259 40.2
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 2.6e-33 146.7 247 40.9
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.6e-33 146.7 254 38.2
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 3.3e-33 146.4 218 43.6
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 4.4e-33 146.0 248 39.5
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.4e-33 146.0 250 38.8
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 4.4e-33 146.0 214 43.0
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 5.7e-33 145.6 255 37.3
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 5.7e-33 145.6 252 38.5
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 9.7e-33 144.8 261 37.2
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 1.3e-32 144.4 247 39.3
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 1.3e-32 144.4 237 38.4
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 1.7e-32 144.1 213 42.7
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 1.7e-32 144.1 234 39.7
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 1.7e-32 144.1 217 41.5
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 2.2e-32 143.7 249 39.4
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 2.2e-32 143.7 247 39.7
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 2.2e-32 143.7 252 39.3
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.2e-32 143.7 218 42.7
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 2.8e-32 143.3 254 38.2
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.8e-32 143.3 220 43.6
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 3.7e-32 142.9 245 40.8
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 4.8e-32 142.5 240 37.5
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 4.8e-32 142.5 250 38.4
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 4.8e-32 142.5 234 39.7
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 6.3e-32 142.1 236 39.4
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 6.3e-32 142.1 243 37.4
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 6.3e-32 142.1 236 42.8
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 6.3e-32 142.1 248 39.9
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 8.2e-32 141.7 247 38.9
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 1.1e-31 141.4 225 40.4
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 1.4e-31 141.0 214 41.1
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.8e-31 140.6 263 36.5
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 2.4e-31 140.2 262 37.4
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 2.4e-31 140.2 261 36.8
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 3.1e-31 139.8 236 39.4
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 3.1e-31 139.8 245 38.4
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 3.1e-31 139.8 244 39.8
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 5.3e-31 139.0 245 40.0
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 7.0e-31 138.7 214 39.7
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 1.2e-30 137.9 244 38.1
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 1.6e-30 137.5 236 38.6
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 1.6e-30 137.5 217 40.6
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 1.6e-30 137.5 221 41.2
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 1.6e-30 137.5 237 38.4
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 3.5e-30 136.3 250 37.2
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 5.9e-30 135.6 227 38.8
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 5.9e-30 135.6 227 38.8
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 7.7e-30 135.2 240 39.2
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 1.3e-29 134.4 215 42.3
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 1.7e-29 134.0 214 40.7
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 2.2e-29 133.7 238 38.7
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 2.9e-29 133.3 233 38.6
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 8.5e-29 131.7 184 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 2.1e-27 127.1 217 40.1
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 2.7e-27 126.7 257 35.0
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 3.6e-27 126.3 255 34.5
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.6e-27 126.3 179 43.6
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 6.1e-27 125.6 270 36.3
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 8.0e-27 125.2 225 36.9
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 1.0e-26 124.8 252 34.5
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 3.0e-26 123.2 271 33.9
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 4.0e-26 122.9 182 43.4
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 4.0e-26 122.9 216 37.5
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 5.2e-26 122.5 252 33.7
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 5.2e-26 122.5 252 33.7
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 5.2e-26 122.5 252 33.7
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 5.2e-26 122.5 231 38.1
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 6.8e-26 122.1 251 33.1
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 6.8e-26 122.1 263 36.1
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 8.8e-26 121.7 261 33.3
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 1.2e-25 121.3 225 36.4
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 1.5e-25 120.9 232 34.5
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 2.0e-25 120.6 252 32.9
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 3.4e-25 119.8 250 34.0
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 3.4e-25 119.8 248 33.1
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 7.5e-25 118.6 202 43.1
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 1.3e-24 117.9 242 32.6
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 1.7e-24 117.5 249 35.7
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 3.7e-24 116.3 251 33.9
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 3.7e-24 116.3 247 33.6
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 2.9e-21 106.7 271 31.7
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 5.0e-21 105.9 235 33.2
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 2.0e-17 94.0 241 32.0
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 7.5e-17 92.0 179 38.5
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 1.3e-16 91.3 183 33.9
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 3.7e-16 89.7 134 42.5
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 8.3e-16 88.6 192 34.4
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 6.1e-11 72.4 103 44.7
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 2.3e-10 70.5 105 41.9
SEGI_24792 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 5.7e-09 65.9 35 82.9
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 7.8e-06 55.5 185 29.2


User provided reference genes

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