Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 0.0e+00 2045.8 1058 100.0
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 0.0e+00 1890.9 986 99.5
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 0.0e+00 1666.4 879 98.0
SEGI_26236 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 0.0e+00 1080.1 552 99.6
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 2.8e-306 1055.4 572 96.2
SEGI_38716 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.1e-297 1025.4 528 98.9
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.2e-272 943.7 586 84.8
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 7.5e-267 924.5 498 97.8
SEGI_41548 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 7.6e-235 818.1 416 99.0
SEGI_27064 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.9e-204 715.3 407 88.5
SEGI_33411 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 3.1e-196 689.9 365 96.2
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.0e-171 607.4 312 99.4
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.1e-164 585.1 308 97.1
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.0e-162 578.6 295 95.6
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.7e-142 509.6 274 96.4
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.4e-127 461.8 246 94.3
SEGI_13178 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.6e-123 448.4 680 45.0
SEGI_26735 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.6e-122 443.0 220 99.1
SEGI_36078 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 3.9e-98 364.0 199 93.0
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 9.1e-71 273.1 150 100.0
SEGI_39764 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 1.3e-69 269.2 187 78.6
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.8e-50 203.4 941 25.6
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.6e-43 182.6 788 25.5
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.6e-43 182.6 788 25.5
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 6.8e-42 177.2 787 24.9
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 6.8e-42 177.2 787 24.9
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.5e-41 173.7 776 24.4
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.1e-39 168.3 851 23.7
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.0e-38 165.6 780 24.0
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.5e-36 159.5 292 34.6
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 4.7e-35 154.5 259 34.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 8.0e-35 153.7 882 23.7
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.8e-34 152.5 760 23.3
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 2.3e-34 152.1 852 22.2
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.5e-33 149.4 750 23.2
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.3e-32 146.4 260 35.0
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-32 143.7 341 31.7
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-32 143.7 341 31.7
SEGI_17890 Sequoiadendron giganteum HOM05D015639 ORTHO05D020995 7.0e-31 140.6 77 96.1
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.2e-30 139.8 263 33.8
SEGI_03607 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 1.3e-29 136.3 67 100.0
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.5e-28 132.9 173 41.0
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.9e-28 132.5 824 23.5
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 3.3e-28 131.7 147 42.9
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 3.3e-28 131.7 147 42.9
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 7.3e-28 130.6 236 35.6
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-27 129.8 788 21.6
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.0e-26 126.7 248 32.3
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 8.9e-26 123.6 158 40.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 8.9e-26 123.6 251 32.3
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 2.0e-25 122.5 244 32.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.6e-25 122.1 236 33.9
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 3.7e-24 118.2 117 43.6
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.4e-23 116.3 208 36.1
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.1e-23 114.8 161 39.8
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.3e-21 109.0 218 34.4
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 3.9e-21 108.2 166 35.5
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 5.0e-21 107.8 335 27.8
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 8.6e-21 107.1 138 40.6
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 8.6e-21 107.1 166 36.1
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 3.3e-20 105.1 275 31.6
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 3.3e-20 105.1 275 31.6
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 3.3e-20 105.1 123 42.3
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.6e-20 104.4 187 34.2
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.2e-19 103.2 165 38.8
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-19 103.2 171 36.3
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-19 103.2 171 36.3
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.2e-19 103.2 171 36.3
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-19 103.2 171 36.3
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 2.1e-19 102.4 174 33.9
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 3.6e-19 101.7 237 30.8
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 4.7e-19 101.3 235 30.6
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 8.0e-19 100.5 264 29.2
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 6.8e-18 97.4 122 41.0
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.2e-17 96.7 104 42.3
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 5.8e-17 94.4 160 33.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 3.7e-16 91.7 233 29.6
SEGI_38688 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 8.3e-16 90.5 57 80.7
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 2.4e-15 89.0 160 32.5
SEGI_10799 Sequoiadendron giganteum HOM05D000423 ORTHO05D000284 1.6e-14 86.3 55 80.0
SEGI_09160 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 4.6e-14 84.7 53 81.1
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.3e-13 82.4 53 79.2
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 5.0e-13 81.3 53 77.4
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 6.6e-13 80.9 88 40.9
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 1.5e-12 79.7 129 37.2
SEGI_13281 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.9e-12 79.3 49 81.6
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 1.2e-11 76.6 113 36.3
SEGI_18923 Sequoiadendron giganteum HOM05D000428 ORTHO05D015400 1.6e-11 76.3 106 45.3
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 3.6e-11 75.1 49 77.6
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-11 74.7 60 68.3
SEGI_08747 Sequoiadendron giganteum HOM05D000573 ORTHO05D000425 1.4e-10 73.2 52 73.1
SEGI_26630 Sequoiadendron giganteum HOM05D001017 ORTHO05D001025 1.4e-10 73.2 47 78.7
SEGI_07037 Sequoiadendron giganteum HOM05D000059 ORTHO05D001838 1.8e-10 72.8 96 50.0
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.1e-10 72.0 101 41.6
SEGI_39357 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 3.1e-10 72.0 46 78.3
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 4.0e-10 71.6 71 45.1
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 4.0e-10 71.6 52 71.2
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 5.2e-10 71.2 120 32.5
Hund27834 Selenicereus undatus HOM05D001070 ORTHO05D002096 5.2e-10 71.2 120 32.5
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 5.2e-10 71.2 120 32.5
SEGI_19895 Sequoiadendron giganteum HOM05D003912 ORTHO05D004409 5.2e-10 71.2 52 71.2
SEGI_28531 Sequoiadendron giganteum HOM05D000038 ORTHO05D015287 5.2e-10 71.2 49 75.5
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 6.8e-10 70.9 77 41.6
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 6.8e-10 70.9 103 37.9
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 8.9e-10 70.5 119 33.6
SEGI_00748 Sequoiadendron giganteum HOM05D000622 ORTHO05D000475 8.9e-10 70.5 62 61.3
SEGI_24028 Sequoiadendron giganteum HOM05D000015 ORTHO05D018161 8.9e-10 70.5 57 68.4
SEGI_36222 Sequoiadendron giganteum HOM05D000077 ORTHO05D015307 8.9e-10 70.5 55 69.1
SEGI_39599 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 8.9e-10 70.5 49 75.5
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.9e-10 70.5 81 44.4
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.2e-09 70.1 110 36.4
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 3.4e-09 68.6 133 32.3
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 5.8e-09 67.8 78 42.3
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 9.9e-09 67.0 63 49.2
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 3.7e-08 65.1 79 43.0
SEGI_11287 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.9e-08 64.7 50 68.0
SEGI_16832 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 8.3e-08 63.9 40 75.0
SEGI_39847 Sequoiadendron giganteum HOM05D000094 ORTHO05D383741 8.3e-08 63.9 49 69.4
HPP92_028431 Vanilla planifolia HOM05D001070 ORTHO05D002096 1.4e-07 63.2 90 35.6
SEGI_00950 Sequoiadendron giganteum HOM05D001582 ORTHO05D004409 1.9e-07 62.8 52 67.3
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 2.4e-07 62.4 165 33.3
SEGI_00028 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 5.4e-07 61.2 90 46.7
SEGI_27904 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 7.1e-07 60.8 53 62.3
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 2.7e-06 58.9 66 42.4
SEGI_04603 Sequoiadendron giganteum HOM05D012064 ORTHO05D016544 4.6e-06 58.2 52 63.5
SEGI_22870 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 4.6e-06 58.2 45 66.7
TPR.G19445 Trifolium pratense HOM05D001070 ORTHO05D002096 7.8e-06 57.4 61 42.6


User provided reference genes

Program Settings