Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 2.4e-228 795.4 476 100.0
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 5.1e-199 698.0 386 100.0
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 1.7e-16 91.7 494 25.5
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 9.2e-15 85.9 253 30.0
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 6.6e-13 79.7 260 25.8
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 8.6e-13 79.3 455 24.6
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 1.2e-11 75.5 399 24.3
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 3.6e-11 73.9 236 27.1
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 6.2e-11 73.2 249 27.7
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.2e-09 68.9 296 25.0
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 2.0e-09 68.2 242 31.4
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 2.0e-09 68.2 242 31.4
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 2.6e-09 67.8 343 23.3
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 5.8e-09 66.6 248 25.8
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 7.6e-09 66.2 256 26.6
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 9.9e-09 65.9 247 27.9
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.2e-08 64.7 257 26.1
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 3.8e-08 63.9 248 27.4
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 4.9e-08 63.5 245 26.9
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 6.4e-08 63.2 288 24.7
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 1.1e-07 62.4 400 23.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 1.4e-07 62.0 458 27.3
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.4e-07 62.0 293 23.9
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.9e-07 61.6 137 32.1
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 1.9e-07 61.6 246 25.6
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.4e-07 61.2 136 34.6
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 3.2e-07 60.8 253 25.7
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 4.1e-07 60.5 240 28.8
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 7.1e-07 59.7 253 26.5
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 9.2e-07 59.3 252 25.8
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 9.2e-07 59.3 145 30.3
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 9.2e-07 59.3 249 26.5
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.2e-06 58.9 257 26.1
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.2e-06 58.9 401 24.2
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.1e-06 58.2 241 24.9
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 3.5e-06 57.4 249 26.5
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 6.0e-06 56.6 267 24.0
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 6.0e-06 56.6 239 24.3
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 7.8e-06 56.2 253 28.5


User provided reference genes

Program Settings