Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32914 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 5.2e-110 401.0 192 100.0
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 6.3e-47 191.4 129 62.8
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 6.3e-47 191.4 129 62.8
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 6.3e-47 191.4 129 61.2
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 1.8e-46 189.9 129 62.8
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 1.8e-46 189.9 129 62.8
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 2.4e-46 189.5 134 59.7
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 2.4e-46 189.5 129 62.0
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 2.4e-46 189.5 129 61.2
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 3.1e-46 189.1 129 61.2
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 3.1e-46 189.1 129 62.8
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 4.1e-46 188.7 129 62.0
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 4.1e-46 188.7 129 63.6
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 5.3e-46 188.3 123 65.0
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 5.3e-46 188.3 123 65.0
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 5.3e-46 188.3 123 65.0
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 5.3e-46 188.3 129 62.0
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 5.3e-46 188.3 134 59.7
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 5.3e-46 188.3 129 61.2
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 5.3e-46 188.3 129 61.2
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 7.0e-46 188.0 129 62.0
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 9.1e-46 187.6 129 60.5
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 9.1e-46 187.6 129 62.0
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 9.1e-46 187.6 129 61.2
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 1.2e-45 187.2 129 61.2
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 1.2e-45 187.2 129 62.0
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 61.2
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 61.2
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 61.2
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 61.2
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 61.2
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 2.0e-45 186.4 129 60.5
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 3.4e-45 185.7 129 60.5
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 61.2
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 62.0
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 61.2
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 61.2
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 60.5
Oeu014529.1 Olea europaea HOM05D003473 ORTHO05D003872 4.5e-45 185.3 129 60.5
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 5.9e-45 184.9 129 59.7
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 5.9e-45 184.9 129 60.5
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 5.9e-45 184.9 129 61.2
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 5.9e-45 184.9 129 61.2
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 7.7e-45 184.5 129 61.2
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 1.0e-44 184.1 131 59.5
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 1.0e-44 184.1 129 58.1
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.0e-44 184.1 129 61.2
unitig_749.g14017 Utricularia gibba HOM05D003473 ORTHO05D003872 1.0e-44 184.1 123 63.4
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 1.3e-44 183.7 129 60.5
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 1.7e-44 183.3 129 59.7
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 1.7e-44 183.3 129 61.2
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 1.7e-44 183.3 129 60.5
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 3.8e-44 182.2 129 58.9
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 3.8e-44 182.2 129 58.1
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 3.8e-44 182.2 129 59.7
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 5.0e-44 181.8 129 61.2
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 5.0e-44 181.8 129 59.7
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 6.5e-44 181.4 129 59.7
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 8.5e-44 181.0 129 58.9
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 8.5e-44 181.0 129 57.4
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 8.5e-44 181.0 129 59.7
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 8.5e-44 181.0 129 58.9
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 8.5e-44 181.0 134 58.2
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 1.1e-43 180.6 129 59.7
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.1e-43 180.6 125 62.4
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 1.1e-43 180.6 129 60.5
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 1.1e-43 180.6 129 58.9
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 1.4e-43 180.3 136 58.1
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 1.4e-43 180.3 129 62.0
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 1.4e-43 180.3 129 56.6
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 1.4e-43 180.3 129 58.9
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 1.9e-43 179.9 129 58.9
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 4.2e-43 178.7 129 58.1
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 4.2e-43 178.7 129 58.1
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 5.5e-43 178.3 136 56.6
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 5.5e-43 178.3 129 59.7
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 5.5e-43 178.3 134 57.5
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 1.2e-42 177.2 129 58.1
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 1.6e-42 176.8 129 57.4
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 3.6e-42 175.6 129 59.7
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 3.6e-42 175.6 129 56.6
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 4.7e-42 175.3 129 61.2
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 4.7e-42 175.3 129 58.1
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 4.7e-42 175.3 129 58.1
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 4.7e-42 175.3 129 58.9
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 6.1e-42 174.9 129 57.4
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 1.0e-41 174.1 148 52.0
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.0e-41 174.1 129 58.1
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.4e-41 173.7 129 57.4
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.8e-41 173.3 129 58.1
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 2.3e-41 172.9 129 58.1
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 3.0e-41 172.6 129 56.6
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 3.0e-41 172.6 125 58.4
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 3.9e-41 172.2 129 56.6
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.9e-41 172.2 125 58.4
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.9e-41 172.2 125 58.4
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 3.9e-41 172.2 125 60.0
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.9e-41 172.2 129 57.4
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 5.2e-41 171.8 129 55.8
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 5.2e-41 171.8 129 57.4
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 6.7e-41 171.4 129 55.8
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 8.8e-41 171.0 129 57.4
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.1e-40 170.6 129 56.6
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.5e-40 170.2 129 58.1
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 2.0e-40 169.9 129 55.8
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 2.0e-40 169.9 130 56.2
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 2.0e-40 169.9 129 55.8
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 2.6e-40 169.5 129 56.6
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 4.4e-40 168.7 129 56.6
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 5.7e-40 168.3 129 57.4
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 1.3e-39 167.2 129 53.5
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.3e-39 167.2 129 56.6
Psat6g143640 Pisum sativum HOM05D003473 ORTHO05D003872 2.2e-39 166.4 129 56.6
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 2.8e-39 166.0 125 56.0
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 4.8e-39 165.2 129 57.4
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 4.8e-39 165.2 129 54.3
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 6.3e-39 164.9 129 55.8
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 8.2e-39 164.5 129 55.8
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.1e-38 164.1 129 55.8
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 1.4e-38 163.7 136 55.1
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 1.4e-38 163.7 129 54.3
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 5.9e-37 158.3 129 55.0
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 3.8e-36 155.6 136 53.7
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 5.0e-36 155.2 125 57.6
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 6.5e-36 154.8 129 54.3
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 1.1e-35 154.1 104 63.5
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 5.5e-35 151.8 183 39.9
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.1e-34 149.8 129 48.1
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 1.2e-32 144.1 129 50.4
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 9.7e-32 141.0 88 65.9
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.7e-32 141.0 125 50.4
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.7e-31 140.2 129 50.4
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 7.0e-30 134.8 135 47.4
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 1.6e-29 133.7 90 62.2
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.7e-29 131.3 138 40.6
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 5.5e-27 125.2 131 45.8
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 5.5e-27 125.2 122 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.6e-26 122.5 130 44.6
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 4.7e-26 122.1 137 43.1
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.8e-25 118.2 124 42.7
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-24 117.5 130 43.1
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.6e-24 116.3 124 42.7
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.6e-24 116.3 124 41.9
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 7.5e-24 114.8 127 44.1
Actinidia38934 Actinidia chinensis HOM05D003473 ORTHO05D003872 1.7e-23 113.6 85 56.5
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.8e-23 112.1 116 42.2
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 4.1e-22 109.0 131 41.2
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 4.1e-22 109.0 115 44.3
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.0e-22 108.2 124 42.7
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 3.5e-21 105.9 79 58.2
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.7e-21 104.8 138 37.7
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 5.0e-20 102.1 126 38.1
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 4.2e-19 99.0 125 38.4
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.8e-17 93.6 130 40.0
SGA_v2.0_scaffold158G37441 Striga asiatica HOM05D003473 ORTHO05D003872 1.4e-14 84.0 76 51.3
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.5e-13 79.0 85 43.5
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 3.8e-12 75.9 139 30.9
SMO241G0018 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 5.0e-12 75.5 70 48.6
SEGI_06008 Sequoiadendron giganteum HOM05D003185 ORTHO05D007711 6.6e-12 75.1 62 54.8
CBR_g48367 Chara braunii HOM05D003473 ORTHO05D003872 1.1e-11 74.3 157 29.9
CBR_g40386 Chara braunii HOM05D003473 ORTHO05D003872 1.5e-11 73.9 156 30.8
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.2e-10 70.9 84 45.2
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 3.4e-08 62.8 109 34.9
GSVIVG01023448001 Vitis vinifera HOM05D003473 ORTHO05D003872 2.9e-07 59.7 34 67.6


User provided reference genes

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