Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32880 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 0.0e+00 1620.1 864 100.0
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 0.0e+00 1385.9 745 99.1
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 2.0e-129 467.6 853 38.2
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 4.9e-115 419.9 791 36.3
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.1e-111 408.7 768 37.1
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.5e-111 407.5 741 38.2
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 5.6e-111 406.4 856 35.6
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 5.8e-108 396.4 782 36.1
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 3.8e-107 393.7 857 33.6
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.4e-106 391.7 788 36.0
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 3.2e-106 390.6 777 36.7
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 7.1e-106 389.4 794 34.6
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 9.2e-106 389.0 792 36.6
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 1.2e-105 388.7 797 35.6
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.6e-105 388.3 861 33.6
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 2.7e-105 387.5 810 33.5
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 4.6e-105 386.7 776 35.2
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 6.0e-105 386.3 781 34.7
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 7.8e-105 386.0 803 36.2
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 1.0e-104 385.6 792 35.1
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.3e-104 385.2 783 35.6
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 5.1e-104 383.3 716 36.0
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.1e-103 382.1 877 32.6
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 1.5e-103 381.7 864 34.5
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 4.3e-103 380.2 876 32.3
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 5.6e-103 379.8 766 34.5
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.6e-102 378.3 771 36.3
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.1e-101 375.6 864 33.7
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 2.4e-101 374.4 787 33.7
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 4.0e-101 373.6 870 31.7
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 4.0e-101 373.6 782 33.6
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 9.0e-101 372.5 878 32.8
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 9.0e-101 372.5 784 36.1
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 5.8e-100 369.8 791 33.1
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 2.2e-99 367.9 785 35.0
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 2.2e-99 367.9 785 35.0
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 2.9e-99 367.5 784 35.8
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 2.9e-99 367.5 881 32.9
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 3.8e-99 367.1 891 32.5
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 1.4e-98 365.2 878 31.8
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 3.2e-98 364.0 802 32.8
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 4.2e-98 363.6 784 34.7
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 9.3e-98 362.5 868 33.6
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.6e-97 361.7 725 34.5
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 3.5e-97 360.5 779 34.1
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 4.6e-97 360.1 788 34.0
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 4.6e-97 360.1 765 35.2
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.0e-96 359.0 799 33.7
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 3.0e-96 357.5 906 31.9
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 5.1e-96 356.7 909 31.8
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 5.1e-96 356.7 774 33.5
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 8.7e-96 355.9 726 36.2
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 8.7e-96 355.9 777 33.2
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 1.1e-95 355.5 860 31.2
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.5e-95 354.4 722 33.9
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.5e-95 354.4 892 31.4
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 1.3e-94 352.1 884 31.3
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.3e-94 352.1 774 32.9
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 6.2e-94 349.7 776 33.6
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 2.4e-93 347.8 881 33.3
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 3.1e-93 347.4 775 32.9
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 5.3e-93 346.7 748 33.8
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 6.9e-93 346.3 798 33.1
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 9.0e-93 345.9 800 34.4
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 2.6e-92 344.4 881 30.6
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 2.6e-92 344.4 783 34.2
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 9.9e-92 342.4 802 34.3
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 9.9e-92 342.4 791 33.6
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 4.9e-91 340.1 809 31.8
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 8.4e-91 339.3 882 31.3
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.1e-90 339.0 879 31.3
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 9.3e-90 335.9 767 32.7
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 2.1e-89 334.7 766 33.0
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 2.7e-89 334.3 878 32.0
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 3.5e-89 334.0 779 32.9
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 3.5e-89 334.0 803 31.5
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 1.0e-88 332.4 863 32.3
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 3.3e-87 327.4 877 30.6
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 3.3e-87 327.4 898 31.4
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 7.4e-87 326.2 771 33.3
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.3e-86 325.5 806 31.3
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 6.2e-86 323.2 873 32.1
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 6.2e-86 323.2 683 34.6
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 1.1e-85 322.4 892 31.5
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.4e-85 322.0 797 31.4
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 2.4e-85 321.2 822 31.0
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.7e-81 307.8 620 34.7
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 1.8e-80 305.1 742 31.7
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.6e-78 298.5 804 30.3
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-68 265.8 355 42.5
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 2.0e-63 248.4 842 28.3
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 4.1e-61 240.7 430 34.0
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.1e-53 216.1 762 28.3
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.2e-44 186.0 169 55.6
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 1.8e-40 172.2 564 27.8
Glyma.08G364200 Glycine max HOM05D003845 ORTHO05D004161 1.2e-33 149.4 569 29.0
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 1.4e-32 146.0 161 48.4
CiPaw.04G041000 Carya illinoinensis HOM05D003845 ORTHO05D004161 9.1e-29 133.3 343 34.7
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 3.8e-27 127.9 737 25.1
CDE02G2490 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 7.5e-23 113.6 348 32.5
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 6.3e-22 110.5 75 70.7
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 9.2e-21 106.7 76 68.4
Lj6g0007936 Lotus japonicus HOM05D003845 ORTHO05D004161 9.8e-15 86.7 314 30.6
Dinv33934 Davidia involucrata HOM05D003845 ORTHO05D004161 3.1e-08 65.1 149 35.6
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 5.2e-08 64.3 143 33.6
Gorai.001G080600 Gossypium raimondii HOM05D003845 ORTHO05D004161 2.2e-06 58.9 169 31.4
Os06g0505100 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 3.7e-06 58.2 284 27.1


User provided reference genes

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