Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32877 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 0.0e+00 1238.8 622 100.0
SEGI_06029 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 2.2e-181 639.8 349 93.1
SEGI_38062 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.6e-120 437.6 256 89.1
SEGI_11513 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.8e-98 364.4 279 72.0
SEGI_01194 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 5.7e-49 199.9 273 48.7
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 1.0e-42 179.1 352 36.6
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 2.3e-42 177.9 318 36.5
SEGI_03512 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 3.4e-41 174.1 129 73.6
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 3.3e-36 157.5 337 33.8
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.4e-31 142.1 351 31.9
SEGI_31868 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 5.4e-31 140.2 102 72.5
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 2.7e-30 137.9 338 29.6
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 3.3e-28 131.0 357 29.1
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 9.5e-28 129.4 341 29.0
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 1.2e-27 129.0 343 26.2
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.6e-27 128.6 367 25.3
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 6.2e-27 126.7 359 30.1
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.2e-27 126.7 364 26.1
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 5.2e-26 123.6 354 28.0
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.2e-25 122.5 355 24.8
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 2.0e-25 121.7 328 29.0
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 5.8e-25 120.2 340 27.1
SEGI_28026 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 5.8e-25 120.2 83 77.1
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 7.5e-25 119.8 344 27.6
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 9.2e-23 112.8 345 28.4
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 2.7e-22 111.3 290 29.7
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.6e-22 110.5 348 27.3
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 6.0e-22 110.2 306 27.5
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 6.0e-22 110.2 335 25.7
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 6.0e-22 110.2 328 27.4
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 1.3e-21 109.0 361 26.9
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 2.3e-21 108.2 349 26.4
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 2.3e-21 108.2 347 27.1
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 3.0e-21 107.8 358 24.9
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.1e-20 105.9 329 27.1
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.9e-20 105.1 346 26.0
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 3.3e-20 104.4 337 26.7
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 4.3e-20 104.0 351 27.4
SEGI_01845 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 4.3e-20 104.0 64 79.7
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 5.6e-20 103.6 303 27.7
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 1.2e-19 102.4 354 26.3
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.6e-19 102.1 386 24.4
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 4.7e-19 100.5 337 26.1
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 4.7e-19 100.5 351 27.4
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 4.7e-19 100.5 319 24.5
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 6.2e-19 100.1 354 24.6
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.4e-18 99.0 325 24.9
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.8e-18 98.6 322 26.1
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 1.8e-18 98.6 332 25.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.3e-18 98.2 385 24.7
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 8.9e-18 96.3 327 26.3
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.2e-17 95.9 322 24.8
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.5e-17 95.5 351 25.1
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.5e-17 95.5 322 25.2
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.5e-17 95.5 322 27.6
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.0e-17 95.1 297 27.3
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.4e-17 94.0 325 25.5
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 9.9e-17 92.8 257 28.4
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.3e-16 92.4 330 24.5
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.7e-16 92.0 328 21.6
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 4.9e-16 90.5 352 24.7
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 1.4e-15 89.0 316 26.9
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 2.4e-15 88.2 333 27.6
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.2e-15 87.8 349 25.5
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 4.1e-15 87.4 350 23.4
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 5.4e-15 87.0 329 23.7
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 9.2e-15 86.3 327 23.5
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 9.2e-15 86.3 309 23.0
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 9.2e-15 86.3 351 23.9
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 1.2e-14 85.9 297 21.9
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 3.5e-14 84.3 320 22.8
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 3.5e-14 84.3 320 22.8
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 4.6e-14 84.0 301 25.6
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 1.0e-13 82.8 319 22.9
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.0e-13 82.8 329 22.5
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 1.0e-13 82.8 347 25.1
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 2.3e-13 81.6 277 26.4
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 3.0e-13 81.3 346 23.4
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 3.0e-13 81.3 314 21.3
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 3.9e-13 80.9 359 23.4
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 3.9e-13 80.9 297 25.9
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 5.1e-13 80.5 289 22.1
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 8.6e-13 79.7 335 23.3
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.5e-12 79.0 353 24.4
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.9e-12 78.6 335 25.1
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 2.5e-12 78.2 312 22.4
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.2e-11 75.9 251 24.3
ATR0661G448 Amborella trichopoda HOM05D002759 ORTHO05D015291 3.6e-11 74.3 243 25.9
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 3.6e-11 74.3 319 24.5
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 4.7e-11 73.9 317 25.2
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 8.1e-11 73.2 318 24.8
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 8.1e-11 73.2 290 23.8
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 8.1e-11 73.2 282 22.0
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 1.1e-10 72.8 313 22.0
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 1.8e-10 72.0 290 22.8
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.8e-10 72.0 348 22.1
FAN18G4196 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.8e-10 72.0 305 25.2
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 8.9e-10 69.7 308 25.3
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 2.2e-08 65.1 102 40.2
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 2.9e-08 64.7 275 25.8
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 2.9e-08 64.7 275 25.8
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 8.4e-08 63.2 156 29.5
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 2.7e-06 58.2 262 24.8
Actinidia00220 Actinidia chinensis HOM05D002759 ORTHO05D003290 3.5e-06 57.8 94 36.2


User provided reference genes

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