Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 4.0e-111 404.8 211 100.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.6e-56 223.4 157 68.8
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.4e-55 220.3 199 58.3
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 5.3e-55 218.4 156 67.3
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 7.6e-54 214.5 156 66.7
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.3e-53 213.8 156 67.9
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.3e-53 213.8 155 68.4
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 3.8e-53 212.2 155 68.4
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 3.8e-53 212.2 155 68.4
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.5e-53 211.5 165 63.0
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 8.4e-53 211.1 156 66.0
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.9e-52 209.9 155 65.8
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.9e-52 209.9 155 65.8
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.9e-52 209.9 156 66.0
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.5e-52 209.5 156 66.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.2e-52 209.1 155 65.8
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 5.5e-52 208.4 156 65.4
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 7.1e-52 208.0 155 65.8
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.1e-52 208.0 155 65.2
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 7.1e-52 208.0 155 66.5
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 1.6e-51 206.8 156 64.7
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.6e-51 206.8 156 64.7
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.6e-51 206.8 156 64.7
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 2.1e-51 206.5 156 64.7
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.7e-51 206.1 156 64.1
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.7e-51 206.1 157 65.0
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 3.5e-51 205.7 181 59.7
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 7.9e-51 204.5 157 63.7
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.3e-50 203.8 152 67.1
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.3e-50 203.8 155 64.5
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.0e-50 202.6 147 68.0
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 3.9e-50 202.2 157 64.3
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 5.1e-50 201.8 174 59.8
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 5.1e-50 201.8 155 63.9
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 6.7e-50 201.4 154 64.3
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 6.7e-50 201.4 155 65.2
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.1e-49 200.7 156 64.1
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.5e-49 200.3 162 61.7
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.9e-49 199.9 162 63.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.9e-49 199.9 157 63.1
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.5e-49 199.5 170 61.8
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 3.3e-49 199.1 156 60.9
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.3e-49 199.1 156 60.9
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 4.3e-49 198.7 156 62.2
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 4.3e-49 198.7 156 62.2
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 4.3e-49 198.7 155 63.2
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 4.3e-49 198.7 148 65.5
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 5.7e-49 198.4 156 62.8
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 5.7e-49 198.4 145 68.3
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 7.4e-49 198.0 156 62.2
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 7.4e-49 198.0 156 62.2
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 9.6e-49 197.6 156 62.2
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-48 197.2 155 64.5
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 1.3e-48 197.2 156 60.9
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-48 196.8 156 61.5
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.6e-48 196.8 188 54.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.6e-48 196.8 156 61.5
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.6e-48 196.8 155 63.2
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.1e-48 196.4 155 62.6
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 2.1e-48 196.4 156 61.5
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 2.1e-48 196.4 155 60.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 4.8e-48 195.3 157 63.1
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 4.8e-48 195.3 146 67.1
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 4.8e-48 195.3 155 63.9
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.2e-48 194.9 154 64.3
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.2e-48 194.5 147 66.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 8.2e-48 194.5 156 64.7
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 1.4e-47 193.7 155 62.6
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.4e-47 193.7 156 65.4
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 1.8e-47 193.4 157 61.8
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 2.4e-47 193.0 155 61.9
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.4e-47 193.0 182 56.6
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 2.4e-47 193.0 159 59.7
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 3.1e-47 192.6 158 60.8
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 4.1e-47 192.2 155 63.2
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.1e-47 192.2 152 63.2
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 5.3e-47 191.8 155 61.3
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 5.3e-47 191.8 156 62.8
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 9.0e-47 191.0 155 58.7
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 9.0e-47 191.0 161 61.5
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.5e-46 190.3 164 60.4
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.5e-46 190.3 157 61.8
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 7.6e-46 188.0 154 61.7
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 7.6e-46 188.0 155 61.3
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.0e-45 187.6 166 59.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.9e-45 186.0 155 60.6
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 5.0e-45 185.3 153 58.8
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.9e-44 183.3 155 60.0
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.9e-44 183.3 147 64.6
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.2e-44 182.6 159 56.6
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 7.1e-44 181.4 165 57.0
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 3.0e-42 176.0 143 62.2
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.5e-41 172.9 155 57.4
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 8.2e-40 167.9 162 53.7
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 2.4e-39 166.4 157 56.1
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.2e-36 154.8 167 51.5
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.4e-34 150.6 121 63.6
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 8.8e-34 147.9 159 46.5
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.5e-33 147.1 158 49.4
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 1.7e-32 143.7 196 43.4
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.3e-29 134.0 154 47.4
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.4e-28 130.6 89 70.8
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 4.7e-27 125.6 161 44.7
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 6.1e-27 125.2 155 47.7
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.0e-26 124.4 144 50.7
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.0e-25 120.2 87 69.0
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 9.7e-25 117.9 80 71.2
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 3.7e-24 115.9 86 68.6
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.2e-21 106.7 153 43.1
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.0e-18 96.3 73 67.1
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 5.2e-18 95.5 229 31.0
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.3e-16 90.9 82 57.3
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.2e-16 90.1 66 63.6
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.7e-16 89.4 73 60.3
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.5e-14 82.4 74 58.1
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.3e-13 80.9 66 56.1
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 5.7e-09 65.5 62 48.4
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.5e-09 65.1 65 52.3
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.7e-08 63.9 59 55.9
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.0e-06 57.0 85 43.5


User provided reference genes

Program Settings