Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32802 Sequoiadendron giganteum HOM05D001677 ORTHO05D001682 4.7e-194 681.0 348 100.0
SEGI_24881 Sequoiadendron giganteum HOM05D001677 ORTHO05D001682 2.3e-148 529.3 388 74.0
SEGI_08318 Sequoiadendron giganteum HOM05D001677 ORTHO05D001682 9.7e-139 497.3 390 70.0
SEGI_21299 Sequoiadendron giganteum HOM05D001677 ORTHO05D001682 2.5e-33 147.1 190 43.7
SEGI_19738 Sequoiadendron giganteum HOM05D001677 ORTHO05D001682 7.9e-32 142.1 190 41.6
Duzib084G0945 Durio zibethinus HOM05D001677 ORTHO05D001682 4.7e-16 89.7 198 30.8
QL05p049365 Quercus lobata HOM05D001677 ORTHO05D001682 2.3e-15 87.4 196 33.2
QL10p001689 Quercus lobata HOM05D001677 ORTHO05D001682 2.3e-15 87.4 196 33.2
Actinidia08892 Actinidia chinensis HOM05D001677 ORTHO05D001682 3.0e-15 87.0 198 30.3
Thecc.03G136300 Theobroma cacao HOM05D001677 ORTHO05D001682 3.0e-15 87.0 198 31.3
ATR0582G005 Amborella trichopoda HOM05D001677 ORTHO05D001682 5.2e-15 86.3 195 31.3
QL10p001641 Quercus lobata HOM05D001677 ORTHO05D001682 6.7e-15 85.9 196 32.1
Ciclev10030485m.g Citrus clementina HOM05D001677 ORTHO05D001682 1.2e-14 85.1 201 32.3
QL05p049377 Quercus lobata HOM05D001677 ORTHO05D001682 1.5e-14 84.7 196 31.6
Sabra12G0076300 Salix brachista HOM05D001677 ORTHO05D001682 1.5e-14 84.7 196 30.6
TWI23G0548 Tripterygium wilfordii HOM05D001677 ORTHO05D001682 2.0e-14 84.3 196 30.6
Ciclev10030486m.g Citrus clementina HOM05D001677 ORTHO05D001682 2.6e-14 84.0 197 33.0
Nn3g16347 Nelumbo nucifera HOM05D001677 ORTHO05D001682 3.3e-14 83.6 138 33.3
Sabra12G0076200 Salix brachista HOM05D001677 ORTHO05D001682 3.3e-14 83.6 196 30.6
CANSAT80G2052 Cannabis sativa HOM05D001677 ORTHO05D001682 4.4e-14 83.2 196 30.1
CiPaw.12G002400 Carya illinoinensis HOM05D001677 ORTHO05D001682 4.4e-14 83.2 196 30.1
MD08G1075800 Malus domestica HOM05D001677 ORTHO05D001682 4.4e-14 83.2 137 38.0
Cpa.g.sc4.136 Carica papaya HOM05D001677 ORTHO05D001682 7.5e-14 82.4 197 31.0
Duzib205G1638 Durio zibethinus HOM05D001677 ORTHO05D001682 1.3e-13 81.6 192 30.2
MD15G1063200 Malus domestica HOM05D001677 ORTHO05D001682 1.7e-13 81.3 138 37.0
Manes.14G047284 Manihot esculenta HOM05D001677 ORTHO05D001682 1.7e-13 81.3 195 32.3
Manes.14G047228 Manihot esculenta HOM05D001677 ORTHO05D001682 2.2e-13 80.9 195 32.3
Potri.015G103000 Populus trichocarpa HOM05D001677 ORTHO05D001682 2.2e-13 80.9 196 30.6
Gohir.A11G037600 Gossypium hirsutum HOM05D001677 ORTHO05D001682 2.8e-13 80.5 198 30.8
Cfa018734 Carpinus fangiana HOM05D001677 ORTHO05D001682 3.7e-13 80.1 196 29.6
QL10p001595 Quercus lobata HOM05D001677 ORTHO05D001682 3.7e-13 80.1 196 30.1
vmacro16736 Vaccinium macrocarpon HOM05D001677 ORTHO05D001682 3.7e-13 80.1 169 32.0
CiPaw.16G063600 Carya illinoinensis HOM05D001677 ORTHO05D001682 4.8e-13 79.7 196 28.6
Potri.015G102700 Populus trichocarpa HOM05D001677 ORTHO05D001682 4.8e-13 79.7 196 30.1
Rhsim12G0178100 Rhododendron simsii HOM05D001677 ORTHO05D001682 4.8e-13 79.7 196 30.6
Potri.015G102301 Populus trichocarpa HOM05D001677 ORTHO05D001682 8.2e-13 79.0 196 31.1
Haze_07128 Corylus avellana HOM05D001677 ORTHO05D001682 1.1e-12 78.6 196 29.6
Rhsim08G0194500 Rhododendron simsii HOM05D001677 ORTHO05D001682 1.1e-12 78.6 195 32.8
Sabra15G0122500 Salix brachista HOM05D001677 ORTHO05D001682 1.1e-12 78.6 196 30.6
Haze_07127 Corylus avellana HOM05D001677 ORTHO05D001682 1.4e-12 78.2 196 30.1
MD06G1135400 Malus domestica HOM05D001677 ORTHO05D001682 1.4e-12 78.2 195 31.3
Sabra15G0122400 Salix brachista HOM05D001677 ORTHO05D001682 1.4e-12 78.2 138 33.3
QL10p001512 Quercus lobata HOM05D001677 ORTHO05D001682 1.8e-12 77.8 138 36.2
Atru.chr6.1884 Acer truncatum HOM05D001677 ORTHO05D001682 2.4e-12 77.4 198 29.3
GSVIVG01009279001 Vitis vinifera HOM05D001677 ORTHO05D001682 2.4e-12 77.4 136 33.1
CiPaw.16G062900 Carya illinoinensis HOM05D001677 ORTHO05D001682 3.1e-12 77.0 196 28.1
Potri.012G103700 Populus trichocarpa HOM05D001677 ORTHO05D001682 3.1e-12 77.0 196 29.6
MD06G1134600 Malus domestica HOM05D001677 ORTHO05D001682 4.1e-12 76.6 137 34.3
vmacro07666 Vaccinium macrocarpon HOM05D001677 ORTHO05D001682 4.1e-12 76.6 198 28.8
Dinv23192 Davidia involucrata HOM05D001677 ORTHO05D001682 5.3e-12 76.3 196 30.1
MBI11_g34376_MAGBIO Magnolia biondii HOM05D001677 ORTHO05D001682 5.3e-12 76.3 195 29.2
Potri.015G103100 Populus trichocarpa HOM05D001677 ORTHO05D001682 5.3e-12 76.3 196 29.1
QL10p001571 Quercus lobata HOM05D001677 ORTHO05D001682 5.3e-12 76.3 197 32.0
Gohir.D11G040900 Gossypium hirsutum HOM05D001677 ORTHO05D001682 7.0e-12 75.9 157 35.7
MD06G1135000 Malus domestica HOM05D001677 ORTHO05D001682 7.0e-12 75.9 193 30.6
Aqoxy388s004 Aquilegia oxysepala HOM05D001677 ORTHO05D001682 1.6e-11 74.7 198 29.3
Aqoxy5G03233_Aqoxy5G03234 Aquilegia oxysepala HOM05D001677 ORTHO05D001682 1.6e-11 74.7 198 29.3
MELO3C026178.2 Cucumis melo HOM05D001677 ORTHO05D001682 1.6e-11 74.7 195 30.8
Potri.015G102200 Populus trichocarpa HOM05D001677 ORTHO05D001682 1.6e-11 74.7 196 28.1
Atru.chr5.2723 Acer truncatum HOM05D001677 ORTHO05D001682 2.0e-11 74.3 198 28.3
Lalb_Chr09g0328741 Lupinus albus HOM05D001677 ORTHO05D001682 2.0e-11 74.3 196 30.6
Gorai.007G044000 Gossypium raimondii HOM05D001677 ORTHO05D001682 2.7e-11 73.9 157 34.4
Sed0021934 Sechium edule HOM05D001677 ORTHO05D001682 3.5e-11 73.6 175 32.0
Ciclev10030487m.g Citrus clementina HOM05D001677 ORTHO05D001682 4.5e-11 73.2 198 29.3
MD08G1076000 Malus domestica HOM05D001677 ORTHO05D001682 4.5e-11 73.2 136 34.6
GSVIVG01008603001 Vitis vinifera HOM05D001677 ORTHO05D001682 4.5e-11 73.2 203 27.1
Atru.chr2.541 Acer truncatum HOM05D001677 ORTHO05D001682 5.9e-11 72.8 194 28.4
Actinidia25541 Actinidia chinensis HOM05D001677 ORTHO05D001682 5.9e-11 72.8 136 35.3
ClCG06G018180 Citrullus lanatus HOM05D001677 ORTHO05D001682 5.9e-11 72.8 195 29.2
Ciclev10033797m.g Citrus clementina HOM05D001677 ORTHO05D001682 5.9e-11 72.8 196 28.6
FvH4_5g09020 Fragaria vesca HOM05D001677 ORTHO05D001682 1.0e-10 72.0 138 31.9
FAN18G3131 Fragaria x ananassa HOM05D001677 ORTHO05D001682 1.0e-10 72.0 138 31.9
Aqoxy31s001 Aquilegia oxysepala HOM05D001677 ORTHO05D001682 1.3e-10 71.6 154 29.9
Haze_07129 Corylus avellana HOM05D001677 ORTHO05D001682 1.3e-10 71.6 196 29.1
Sc22g0003590 Simmondsia chinensis HOM05D001677 ORTHO05D001682 1.3e-10 71.6 199 28.1
FAN13G0435 Fragaria x ananassa HOM05D001677 ORTHO05D001682 1.7e-10 71.2 141 31.9
CSS0014974 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 2.9e-10 70.5 199 29.6
HanXRQChr05g0157701 Helianthus annuus HOM05D001677 ORTHO05D001682 3.8e-10 70.1 195 27.2
MBI11_g08319_MAGBIO Magnolia biondii HOM05D001677 ORTHO05D001682 3.8e-10 70.1 196 27.6
Nn1g06301 Nelumbo nucifera HOM05D001677 ORTHO05D001682 5.0e-10 69.7 161 32.3
RcHm_v2.0_Chr7g0189261 Rosa chinensis HOM05D001677 ORTHO05D001682 5.0e-10 69.7 138 31.9
Sed0008346 Sechium edule HOM05D001677 ORTHO05D001682 5.0e-10 69.7 139 33.1
CAN.G758.15 Capsicum annuum HOM05D001677 ORTHO05D001682 6.5e-10 69.3 154 31.2
Cfa018735 Carpinus fangiana HOM05D001677 ORTHO05D001682 6.5e-10 69.3 196 28.1
CsaV3_1G000240 Cucumis sativus L. HOM05D001677 ORTHO05D001682 6.5e-10 69.3 195 29.2
DCAR_026252 Daucus carota HOM05D001677 ORTHO05D001682 6.5e-10 69.3 198 29.8
Lsat_1_v5_gn_5_10700 Lactuca sativa HOM05D001677 ORTHO05D001682 6.5e-10 69.3 195 28.7
RcHm_v2.0_Chr4g0412151 Rosa chinensis HOM05D001677 ORTHO05D001682 6.5e-10 69.3 198 26.8
Medtr8g011230 Medicago truncatula HOM05D001677 ORTHO05D001682 8.5e-10 68.9 195 31.8
Prupe.5G145400 Prunus persica HOM05D001677 ORTHO05D001682 8.5e-10 68.9 196 29.6
CSS0007435 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 1.1e-09 68.6 199 28.1
HanXRQChr05g0157711 Helianthus annuus HOM05D001677 ORTHO05D001682 1.1e-09 68.6 195 28.2
MD06G1135200 Malus domestica HOM05D001677 ORTHO05D001682 1.1e-09 68.6 196 28.1
Prupe.5G145900 Prunus persica HOM05D001677 ORTHO05D001682 1.1e-09 68.6 198 28.8
COL.COLO4_16667 Corchorus olitorius HOM05D001677 ORTHO05D001682 1.5e-09 68.2 138 31.2
DCAR_026240 Daucus carota HOM05D001677 ORTHO05D001682 1.5e-09 68.2 198 30.3
DCAR_026249 Daucus carota HOM05D001677 ORTHO05D001682 1.5e-09 68.2 198 29.8
FAN04G3180 Fragaria x ananassa HOM05D001677 ORTHO05D001682 1.5e-09 68.2 138 30.4
FAN08G0140 Fragaria x ananassa HOM05D001677 ORTHO05D001682 1.5e-09 68.2 138 31.2
MD06G1135500 Malus domestica HOM05D001677 ORTHO05D001682 1.5e-09 68.2 138 31.2
Lj1g0023217 Lotus japonicus HOM05D001677 ORTHO05D001682 1.9e-09 67.8 197 27.9
Oeu042468.2 Olea europaea HOM05D001677 ORTHO05D001682 1.9e-09 67.8 192 30.2
EL10Ac5g11343 Beta vulgaris HOM05D001677 ORTHO05D001682 2.5e-09 67.4 196 28.1
Nitab4.5_0001464g0090 Nicotiana tabacum HOM05D001677 ORTHO05D001682 2.5e-09 67.4 198 27.8
Prupe.5G145600 Prunus persica HOM05D001677 ORTHO05D001682 2.5e-09 67.4 196 29.1
MBI11_g34374_MAGBIO Magnolia biondii HOM05D001677 ORTHO05D001682 3.2e-09 67.0 192 29.7
TPR.G28991 Trifolium pratense HOM05D001677 ORTHO05D001682 3.2e-09 67.0 197 30.5
TPR.G10122 Trifolium pratense HOM05D001677 ORTHO05D001682 4.2e-09 66.6 147 31.3
CSS0035392 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 5.5e-09 66.2 199 28.6
Cfa018739 Carpinus fangiana HOM05D001677 ORTHO05D001682 5.5e-09 66.2 138 34.1
Lj5C789T2 Lonicera japonica HOM05D001677 ORTHO05D001682 5.5e-09 66.2 196 29.6
CSS0047988 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 7.2e-09 65.9 196 28.6
Medtr2g067030 Medicago truncatula HOM05D001677 ORTHO05D001682 7.2e-09 65.9 196 30.1
Cfa018738 Carpinus fangiana HOM05D001677 ORTHO05D001682 9.4e-09 65.5 139 33.1
COL.COLO4_16669 Corchorus olitorius HOM05D001677 ORTHO05D001682 9.4e-09 65.5 138 29.7
Medtr8g011210 Medicago truncatula HOM05D001677 ORTHO05D001682 9.4e-09 65.5 197 31.0
Peaxi162Scf00516g00002 Petunia axillaris HOM05D001677 ORTHO05D001682 9.4e-09 65.5 198 27.3
Peaxi162Scf01122g00016 Petunia axillaris HOM05D001677 ORTHO05D001682 9.4e-09 65.5 198 27.3
RcHm_v2.0_Chr7g0189211 Rosa chinensis HOM05D001677 ORTHO05D001682 9.4e-09 65.5 191 27.2
CSS0011249 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 1.2e-08 65.1 191 28.8
CSS0042921 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 1.2e-08 65.1 154 31.2
CiPaw.12G002600 Carya illinoinensis HOM05D001677 ORTHO05D001682 1.2e-08 65.1 188 28.7
AUR62029541 Chenopodium quinoa HOM05D001677 ORTHO05D001682 1.2e-08 65.1 210 28.6
Lj5g0014641 Lotus japonicus HOM05D001677 ORTHO05D001682 1.2e-08 65.1 196 28.6
Medtr3g408440 Medicago truncatula HOM05D001677 ORTHO05D001682 1.2e-08 65.1 138 31.9
Peaxi162Scf00516g00021 Petunia axillaris HOM05D001677 ORTHO05D001682 1.2e-08 65.1 195 27.7
Prupe.1G417200 Prunus persica HOM05D001677 ORTHO05D001682 1.2e-08 65.1 138 32.6
ECA246G3205 Erigeron canadensis HOM05D001677 ORTHO05D001682 1.6e-08 64.7 195 27.2
HanXRQChr05g0157671 Helianthus annuus HOM05D001677 ORTHO05D001682 1.6e-08 64.7 121 31.4
Lj5g0011496 Lotus japonicus HOM05D001677 ORTHO05D001682 1.6e-08 64.7 196 28.1
Medtr8g090165 Medicago truncatula HOM05D001677 ORTHO05D001682 1.6e-08 64.7 198 31.3
QL10p001355 Quercus lobata HOM05D001677 ORTHO05D001682 1.6e-08 64.7 192 29.2
ATR0582G233 Amborella trichopoda HOM05D001677 ORTHO05D001682 2.1e-08 64.3 124 31.5
Lj5g0002166 Lotus japonicus HOM05D001677 ORTHO05D001682 2.1e-08 64.3 196 28.6
Lj5g0016973 Lotus japonicus HOM05D001677 ORTHO05D001682 2.1e-08 64.3 196 28.6
LjContig00445g0016036 Lotus japonicus HOM05D001677 ORTHO05D001682 2.1e-08 64.3 196 28.6
Cfa018740 Carpinus fangiana HOM05D001677 ORTHO05D001682 2.7e-08 63.9 138 34.1
AUR62034811 Chenopodium quinoa HOM05D001677 ORTHO05D001682 2.7e-08 63.9 195 27.2
Ca_23173_v3 Cicer arietinum L. HOM05D001677 ORTHO05D001682 2.7e-08 63.9 195 30.3
Lj5C792G1 Lonicera japonica HOM05D001677 ORTHO05D001682 2.7e-08 63.9 197 28.9
Sopen03g028420 Solanum pennellii HOM05D001677 ORTHO05D001682 2.7e-08 63.9 154 28.6
Aqoxy5G03232 Aquilegia oxysepala HOM05D001677 ORTHO05D001682 3.6e-08 63.5 195 27.7
arahy.Tifrunner.gnm1.ann1.JIS6TX Arachis hypogaea HOM05D001677 ORTHO05D001682 3.6e-08 63.5 200 28.5
Lsat_1_v5_gn_5_10520 Lactuca sativa HOM05D001677 ORTHO05D001682 3.6e-08 63.5 195 27.7
Psat4g206840 Pisum sativum HOM05D001677 ORTHO05D001682 3.6e-08 63.5 197 29.9
RcHm_v2.0_Chr2g0086101 Rosa chinensis HOM05D001677 ORTHO05D001682 3.6e-08 63.5 138 30.4
arahy.Tifrunner.gnm1.ann1.780T1G Arachis hypogaea HOM05D001677 ORTHO05D001682 4.7e-08 63.2 200 28.5
CANSAT80G2817 Cannabis sativa HOM05D001677 ORTHO05D001682 4.7e-08 63.2 137 29.9
Cc04_g09790 Coffea canephora HOM05D001677 ORTHO05D001682 4.7e-08 63.2 145 30.3
vmacro07667 Vaccinium macrocarpon HOM05D001677 ORTHO05D001682 6.1e-08 62.8 201 26.4
Medtr8g011330 Medicago truncatula HOM05D001677 ORTHO05D001682 8.0e-08 62.4 197 29.4
Psat4g207000 Pisum sativum HOM05D001677 ORTHO05D001682 8.0e-08 62.4 196 31.1
BcaC06g34372 Brassica carinata HOM05D001677 ORTHO05D001682 1.0e-07 62.0 198 27.3
C07p29760 Brassica napus HOM05D001677 ORTHO05D001682 1.0e-07 62.0 198 27.3
Lj5g0013644 Lotus japonicus HOM05D001677 ORTHO05D001682 1.0e-07 62.0 196 28.1
BraA06t27455Z Brassica rapa HOM05D001677 ORTHO05D001682 1.4e-07 61.6 138 33.3
Rhsim10G0093600 Rhododendron simsii HOM05D001677 ORTHO05D001682 1.4e-07 61.6 119 32.8
TPR.G10128 Trifolium pratense HOM05D001677 ORTHO05D001682 1.4e-07 61.6 193 30.1
CSS0023392 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 1.8e-07 61.2 154 29.9
CSS0028172 Camellia sinensis var. sinensis HOM05D001677 ORTHO05D001682 1.8e-07 61.2 137 32.1
Ca_23175_v3 Cicer arietinum L. HOM05D001677 ORTHO05D001682 1.8e-07 61.2 197 29.4
Lsat_1_v5_gn_5_10340 Lactuca sativa HOM05D001677 ORTHO05D001682 1.8e-07 61.2 138 30.4
Oeu023506.1 Olea europaea HOM05D001677 ORTHO05D001682 1.8e-07 61.2 111 35.1
Phvul.010G031800 Phaseolus vulgaris HOM05D001677 ORTHO05D001682 1.8e-07 61.2 194 27.8
Nitab4.5_0013122g0010 Nicotiana tabacum HOM05D001677 ORTHO05D001682 2.3e-07 60.8 165 29.1
Lalb_Chr16g0384991 Lupinus albus HOM05D001677 ORTHO05D001682 3.0e-07 60.5 196 28.6
Ca_23174_v3 Cicer arietinum L. HOM05D001677 ORTHO05D001682 4.0e-07 60.1 198 28.3
FAN07G0126 Fragaria x ananassa HOM05D001677 ORTHO05D001682 8.8e-07 58.9 137 31.4
Psat0s409g0040 Pisum sativum HOM05D001677 ORTHO05D001682 8.8e-07 58.9 197 27.9
Rhsim10G0093800 Rhododendron simsii HOM05D001677 ORTHO05D001682 1.2e-06 58.5 119 32.8
Sp2g11380 Schrenkiella parvula HOM05D001677 ORTHO05D001682 1.2e-06 58.5 198 26.3
Aqoxy5G03229 Aquilegia oxysepala HOM05D001677 ORTHO05D001682 1.5e-06 58.2 119 29.4
A06p45880 Brassica napus HOM05D001677 ORTHO05D001682 1.5e-06 58.2 198 25.8
Hma1.2p1_0424F.1_g150350 Hydrangea macrophylla HOM05D001677 ORTHO05D001682 1.5e-06 58.2 136 28.7
Lsat_1_v5_gn_5_10680 Lactuca sativa HOM05D001677 ORTHO05D001682 1.5e-06 58.2 138 29.0
BcaC06g31467 Brassica carinata HOM05D001677 ORTHO05D001682 2.0e-06 57.8 139 31.7
PSO675G5911 Papaver somniferum HOM05D001677 ORTHO05D001682 3.4e-06 57.0 139 25.9
TPR.G10117 Trifolium pratense HOM05D001677 ORTHO05D001682 3.4e-06 57.0 195 28.2
Aa31LG4G17320 Aethionema arabicum HOM05D001677 ORTHO05D001682 4.4e-06 56.6 152 31.6
Haze_07697 Corylus avellana HOM05D001677 ORTHO05D001682 4.4e-06 56.6 139 32.4
Lsat_1_v5_gn_5_10440 Lactuca sativa HOM05D001677 ORTHO05D001682 4.4e-06 56.6 195 26.2
RcHm_v2.0_Chr2g0086071 Rosa chinensis HOM05D001677 ORTHO05D029502 4.4e-06 56.6 137 29.9


User provided reference genes

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