Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32759 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 9.1e-72 273.5 139 100.0
SEGI_19545 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 1.1e-29 133.7 71 95.8
Carub.0008s2797 Capsella rubella HOM05D004251 ORTHO05D005010 2.6e-18 95.9 79 57.0
CARHR281200 Cardamine hirsuta HOM05D004251 ORTHO05D005010 2.6e-18 95.9 79 57.0
TWI73G1034 Tripterygium wilfordii HOM05D004251 ORTHO05D005010 3.4e-18 95.5 83 54.2
BcaC09g50275 Brassica carinata HOM05D004251 ORTHO05D005010 5.8e-18 94.7 79 57.0
A01p21680 Brassica napus HOM05D004251 ORTHO05D005010 5.8e-18 94.7 79 57.0
C01p27030 Brassica napus HOM05D004251 ORTHO05D005010 5.8e-18 94.7 79 57.0
BolC1t02651H Brassica oleracea HOM05D004251 ORTHO05D005010 5.8e-18 94.7 79 57.0
BraA01t02077Z Brassica rapa HOM05D004251 ORTHO05D005010 5.8e-18 94.7 79 57.0
Sp7g14220 Schrenkiella parvula HOM05D004251 ORTHO05D005010 7.6e-18 94.4 79 55.7
SGA_v2.0_scaffold614G53203 Striga asiatica HOM05D004251 ORTHO05D005010 7.6e-18 94.4 83 56.6
Manes.02G094600 Manihot esculenta HOM05D004251 ORTHO05D005010 9.9e-18 94.0 83 54.2
BcaNung00241 Brassica carinata HOM05D004251 ORTHO05D005010 1.3e-17 93.6 79 55.7
Ciclev10025293m.g Citrus clementina HOM05D004251 ORTHO05D005010 1.3e-17 93.6 85 52.9
Thhalv10024792m.g Eutrema salsugineum HOM05D004251 ORTHO05D005010 1.3e-17 93.6 79 54.4
Actinidia36561 Actinidia chinensis HOM05D004251 ORTHO05D005010 1.7e-17 93.2 103 46.6
AL8G23350 Arabidopsis lyrata HOM05D004251 ORTHO05D005010 1.7e-17 93.2 79 54.4
AT5G49555 Arabidopsis thaliana HOM05D004251 ORTHO05D005010 2.9e-17 92.4 79 54.4
Potri.007G025300 Populus trichocarpa HOM05D004251 ORTHO05D005010 2.9e-17 92.4 83 56.6
CANSAT01G2654 Cannabis sativa HOM05D004251 ORTHO05D005010 3.8e-17 92.0 104 48.1
Sabra07G0022400 Salix brachista HOM05D004251 ORTHO05D005010 3.8e-17 92.0 79 57.0
vmacro12727 Vaccinium macrocarpon HOM05D004251 ORTHO05D005010 3.8e-17 92.0 79 54.4
ATR0733G178 Amborella trichopoda HOM05D004251 ORTHO05D005010 4.9e-17 91.7 83 53.0
CSS0006960 Camellia sinensis var. sinensis HOM05D004251 ORTHO05D005010 4.9e-17 91.7 103 46.6
CAN.G358.93 Capsicum annuum HOM05D004251 ORTHO05D005010 4.9e-17 91.7 83 54.2
Cpa.g.sc39.20 Carica papaya HOM05D004251 ORTHO05D005010 4.9e-17 91.7 79 53.2
Aa31LG1G15090 Aethionema arabicum HOM05D004251 ORTHO05D005010 6.4e-17 91.3 79 53.2
THA.LOC104821560 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 6.4e-17 91.3 79 54.4
Dinv39988 Davidia involucrata HOM05D004251 ORTHO05D005010 8.4e-17 90.9 113 42.5
Psat4g093160 Pisum sativum HOM05D004251 ORTHO05D005010 8.4e-17 90.9 83 53.0
BcaC09g50281 Brassica carinata HOM05D004251 ORTHO05D005010 1.1e-16 90.5 77 55.8
CsaV3_4G005780 Cucumis sativus L. HOM05D004251 ORTHO05D005010 1.1e-16 90.5 103 45.6
Aqoxy5G01628 Aquilegia oxysepala HOM05D004251 ORTHO05D005010 1.4e-16 90.1 83 50.6
Cc11_g04410 Coffea canephora HOM05D004251 ORTHO05D005010 1.4e-16 90.1 83 49.4
COL.COLO4_22078 Corchorus olitorius HOM05D004251 ORTHO05D005010 1.4e-16 90.1 83 54.2
MELO3C016373.2 Cucumis melo HOM05D004251 ORTHO05D005010 1.4e-16 90.1 103 45.6
Sopen02g029950 Solanum pennellii HOM05D004251 ORTHO05D005010 1.4e-16 90.1 87 52.9
arahy.Tifrunner.gnm1.ann1.UBH4LM Arachis hypogaea HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 53.0
arahy.Tifrunner.gnm1.ann1.UMLA17 Arachis hypogaea HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 53.0
CiPaw.01G038300 Carya illinoinensis HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 50.6
ECA232G3289 Erigeron canadensis HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 51.8
Oeu033644.1 Olea europaea HOM05D004251 ORTHO05D005010 1.9e-16 89.7 79 53.2
Psat4g093040 Pisum sativum HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 53.0
Rhsim10G0122800 Rhododendron simsii HOM05D004251 ORTHO05D005010 1.9e-16 89.7 79 53.2
Sed0021773 Sechium edule HOM05D004251 ORTHO05D005010 1.9e-16 89.7 79 53.2
TAR625G0258 Trochodendron aralioides HOM05D004251 ORTHO05D005010 1.9e-16 89.7 83 51.8
MSTRG.2762 Avicennia marina HOM05D004251 ORTHO05D005010 2.4e-16 89.4 103 42.7
Dinv13532 Davidia involucrata HOM05D004251 ORTHO05D005010 2.4e-16 89.4 79 53.2
Peaxi162Scf00366g00011 Petunia axillaris HOM05D004251 ORTHO05D005010 2.4e-16 89.4 79 53.2
FvH4_1g13300 Fragaria vesca HOM05D004251 ORTHO05D005010 3.2e-16 89.0 81 50.6
FAN19G0724 Fragaria x ananassa HOM05D004251 ORTHO05D005010 3.2e-16 89.0 81 50.6
HanXRQChr09g0274621 Helianthus annuus HOM05D004251 ORTHO05D005010 3.2e-16 89.0 83 51.8
Solyc02g085250.4 Solanum lycopersicum HOM05D004251 ORTHO05D005010 3.2e-16 89.0 87 51.7
RcHm_v2.0_Chr2g0101541 Rosa chinensis HOM05D004251 ORTHO05D005010 4.2e-16 88.6 85 51.8
PGSC0003DMG402003505 Solanum tuberosum HOM05D004251 ORTHO05D005010 4.2e-16 88.6 87 51.7
MD02G1147300 Malus domestica HOM05D004251 ORTHO05D005010 5.4e-16 88.2 85 51.8
FAN26G0083 Fragaria x ananassa HOM05D004251 ORTHO05D005010 7.1e-16 87.8 81 50.6
Gorai.003G014800 Gossypium raimondii HOM05D004251 ORTHO05D005010 7.1e-16 87.8 83 51.8
Nitab4.5_0000178g0050 Nicotiana tabacum HOM05D004251 ORTHO05D005010 7.1e-16 87.8 83 51.8
Hund13977 Selenicereus undatus HOM05D004251 ORTHO05D005010 7.1e-16 87.8 83 50.6
THA.LOC104821294 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 7.1e-16 87.8 79 53.2
TPR.G24109 Trifolium pratense HOM05D004251 ORTHO05D005010 7.1e-16 87.8 83 50.6
VMungo0251G3189 Vigna mungo HOM05D004251 ORTHO05D005010 7.1e-16 87.8 83 51.8
Glyma.02G056800 Glycine max HOM05D004251 ORTHO05D005010 9.3e-16 87.4 83 51.8
Glyma.16G139600 Glycine max HOM05D004251 ORTHO05D005010 9.3e-16 87.4 83 51.8
Lj1g0003213 Lotus japonicus HOM05D004251 ORTHO05D005010 9.3e-16 87.4 83 50.6
Medtr8g077580 Medicago truncatula HOM05D004251 ORTHO05D005010 9.3e-16 87.4 83 50.6
Nitab4.5_0001385g0110 Nicotiana tabacum HOM05D004251 ORTHO05D005010 9.3e-16 87.4 83 51.8
PSO170G5998 Papaver somniferum HOM05D004251 ORTHO05D005010 9.3e-16 87.4 80 53.8
PSO210G3399 Papaver somniferum HOM05D004251 ORTHO05D005010 1.2e-15 87.0 80 52.5
EL10Ac6g15559 Beta vulgaris HOM05D004251 ORTHO05D005010 1.6e-15 86.7 79 51.9
Gohir.D03G014500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.6e-15 86.7 83 49.4
Nn5g29614 Nelumbo nucifera HOM05D004251 ORTHO05D005010 1.6e-15 86.7 83 51.8
Oeu051950.1 Olea europaea HOM05D004251 ORTHO05D005010 1.6e-15 86.7 103 43.7
QL06p046103 Quercus lobata HOM05D004251 ORTHO05D005010 1.6e-15 86.7 83 50.6
QL06p046182 Quercus lobata HOM05D004251 ORTHO05D005010 1.6e-15 86.7 83 50.6
FAN28G2031 Fragaria x ananassa HOM05D004251 ORTHO05D005010 2.7e-15 85.9 78 50.0
Lj1g0003281 Lotus japonicus HOM05D004251 ORTHO05D005010 2.7e-15 85.9 83 48.2
PGR102G0408 Punica granatum HOM05D004251 ORTHO05D005010 2.7e-15 85.9 83 51.8
PGR102G3108 Punica granatum HOM05D004251 ORTHO05D005010 2.7e-15 85.9 83 50.6
Sc03g0002980 Simmondsia chinensis HOM05D004251 ORTHO05D005010 2.7e-15 85.9 83 50.6
Atru.chr3.576 Acer truncatum HOM05D004251 ORTHO05D005010 3.5e-15 85.5 83 51.8
Oeu056756.2 Olea europaea HOM05D004251 ORTHO05D005010 3.5e-15 85.5 79 49.4
GSVIVG01018958001 Vitis vinifera HOM05D004251 ORTHO05D005010 3.5e-15 85.5 107 43.9
Eucgr.D02612 Eucalyptus grandis HOM05D004251 ORTHO05D005010 6.0e-15 84.7 83 47.0
LjContig00448g0013547 Lotus japonicus HOM05D004251 ORTHO05D005010 6.0e-15 84.7 83 47.0
Prupe.7G154800 Prunus persica HOM05D004251 ORTHO05D005010 6.0e-15 84.7 81 49.4
Ah.03g140880 Amaranthus hybridus HOM05D004251 ORTHO05D005010 7.8e-15 84.3 79 49.4
ClCG01G019560 Citrullus lanatus HOM05D004251 ORTHO05D005010 7.8e-15 84.3 79 51.9
DCAR_017290 Daucus carota HOM05D004251 ORTHO05D005010 7.8e-15 84.3 83 49.4
Hma1.2p1_0400F.1_g144420 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 7.8e-15 84.3 83 48.2
LjContig00448g0018994 Lotus japonicus HOM05D004251 ORTHO05D005010 7.8e-15 84.3 83 49.4
HPP92_017686 Vanilla planifolia HOM05D004251 ORTHO05D005010 7.8e-15 84.3 83 49.4
GSVIVG01018957001 Vitis vinifera HOM05D004251 ORTHO05D005010 7.8e-15 84.3 83 51.8
Lalb_Chr05g0227621 Lupinus albus HOM05D004251 ORTHO05D005010 1.0e-14 84.0 79 48.1
Sed0017564 Sechium edule HOM05D004251 ORTHO05D005010 1.0e-14 84.0 79 50.6
Ca_22268_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.3e-14 83.6 83 47.0
Ca_22281_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.3e-14 83.6 83 47.0
Hma1.2p1_0224F.1_g094630 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 1.7e-14 83.2 79 50.6
Thecc.01G035600 Theobroma cacao HOM05D004251 ORTHO05D005010 1.7e-14 83.2 83 49.4
QL06p046194 Quercus lobata HOM05D004251 ORTHO05D005010 3.0e-14 82.4 84 50.0
Ciclev10025284m.g Citrus clementina HOM05D004251 ORTHO05D005010 3.9e-14 82.0 79 48.1
Os12g0631800 Oryza sativa ssp. japonica HOM05D004251 ORTHO05D005010 3.9e-14 82.0 80 45.0
Atru.chr3.571 Acer truncatum HOM05D004251 ORTHO05D005010 5.1e-14 81.6 79 50.6
CiPaw.02G018000 Carya illinoinensis HOM05D004251 ORTHO05D005010 5.1e-14 81.6 79 49.4
CsaV3_6G046240 Cucumis sativus L. HOM05D004251 ORTHO05D005010 6.6e-14 81.3 109 40.4
Duzib147G0019 Durio zibethinus HOM05D004251 ORTHO05D005010 6.6e-14 81.3 83 50.6
MD15G1261600 Malus domestica HOM05D004251 ORTHO05D005010 6.6e-14 81.3 81 49.4
Duzib147G1661 Durio zibethinus HOM05D004251 ORTHO05D005010 8.7e-14 80.9 83 49.4
arahy.Tifrunner.gnm1.ann1.BIDD64 Arachis hypogaea HOM05D004251 ORTHO05D005010 2.5e-13 79.3 83 48.2
Ca_12487_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 2.5e-13 79.3 83 49.4
arahy.Tifrunner.gnm1.ann1.05783X Arachis hypogaea HOM05D004251 ORTHO05D005010 3.3e-13 79.0 83 47.0
COL.COLO4_22077 Corchorus olitorius HOM05D004251 ORTHO05D005010 4.3e-13 78.6 79 49.4
Thecc.01G035500 Theobroma cacao HOM05D004251 ORTHO05D005010 7.3e-13 77.8 83 48.2
Zm00001eb232720 Zea mays HOM05D004251 ORTHO05D005010 7.3e-13 77.8 101 37.6
Gorai.003G014700 Gossypium raimondii HOM05D004251 ORTHO05D005010 1.6e-12 76.6 83 48.2
unitig_21.g20954 Utricularia gibba HOM05D004251 ORTHO05D005010 2.8e-12 75.9 83 47.0
Medtr1g034450 Medicago truncatula HOM05D004251 ORTHO05D005010 6.2e-12 74.7 83 45.8
Haze_15087 Corylus avellana HOM05D004251 ORTHO05D005010 1.8e-11 73.2 72 48.6
Eucgr.D01664 Eucalyptus grandis HOM05D004251 ORTHO05D005010 5.3e-11 71.6 79 44.3
Prupe.7G154900 Prunus persica HOM05D004251 ORTHO05D005010 5.3e-11 71.6 84 45.2
SMO194G0022 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 5.3e-11 71.6 82 46.3
SMO358G0577 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 1.2e-10 70.5 86 44.2
TPR.G18620 Trifolium pratense HOM05D004251 ORTHO05D005010 1.5e-10 70.1 83 42.2
Pp3c15_20190 Physcomitrium patens HOM05D004251 ORTHO05D005010 1.3e-09 67.0 79 46.8
Oeu041447.3 Olea europaea HOM05D004251 ORTHO05D005010 2.2e-09 66.2 88 39.8
Mapoly0014s0043 Marchantia polymorpha HOM05D004251 ORTHO05D005010 4.9e-09 65.1 84 42.9
AagrBONN_evm.TU.Sc2ySwM_228.727 Anthoceros agrestis HOM05D004251 ORTHO05D005010 8.4e-09 64.3 79 43.0
Gohir.A02G165500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 7.1e-08 61.2 51 52.9
ClCG07G008380 Citrullus lanatus HOM05D004251 ORTHO05D005010 1.2e-07 60.5 60 46.7
Gohir.A02G165600 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.6e-07 60.1 80 40.0
Lsat_1_v5_gn_4_152121 Lactuca sativa HOM05D004251 ORTHO05D005010 1.6e-07 60.1 59 49.2
Gohir.D03G014400 Gossypium hirsutum HOM05D004251 ORTHO05D005010 2.7e-07 59.3 48 54.2
FAN23G1347 Fragaria x ananassa HOM05D004251 ORTHO05D005010 6.6e-06 54.7 74 43.2


User provided reference genes

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