Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32749 Sequoiadendron giganteum HOM05D002663 ORTHO05D002988 7.4e-56 220.3 112 100.0
AUR62015568 Chenopodium quinoa HOM05D002663 ORTHO05D002988 4.2e-19 98.2 95 58.9
Pp3c12_10890 Physcomitrium patens HOM05D002663 ORTHO05D002988 9.4e-19 97.1 69 72.5
AUR62002140 Chenopodium quinoa HOM05D002663 ORTHO05D002988 2.1e-18 95.9 112 50.0
CARHR003760 Cardamine hirsuta HOM05D002663 ORTHO05D002988 2.7e-18 95.5 112 45.5
Nitab4.5_0005627g0010 Nicotiana tabacum HOM05D002663 ORTHO05D002988 2.7e-18 95.5 74 64.9
FAN17G1274 Fragaria x ananassa HOM05D002663 ORTHO05D002988 3.6e-18 95.1 61 77.0
FAN22G0078 Fragaria x ananassa HOM05D002663 ORTHO05D002988 3.6e-18 95.1 61 77.0
Cc03_g05580 Coffea canephora HOM05D002663 ORTHO05D002988 4.7e-18 94.7 67 65.7
Gorai.002G025400 Gossypium raimondii HOM05D002663 ORTHO05D002988 6.1e-18 94.4 64 70.3
Nitab4.5_0000302g0190 Nicotiana tabacum HOM05D002663 ORTHO05D002988 6.1e-18 94.4 81 59.3
Peaxi162Scf00579g00048 Petunia axillaris HOM05D002663 ORTHO05D002988 6.1e-18 94.4 65 70.8
Mapoly0053s0107 Marchantia polymorpha HOM05D002663 ORTHO05D002988 8.0e-18 94.0 69 65.2
Hund03041 Selenicereus undatus HOM05D002663 ORTHO05D002988 8.0e-18 94.0 54 85.2
Ah.04g155740 Amaranthus hybridus HOM05D002663 ORTHO05D002988 1.0e-17 93.6 63 69.8
EL10Ac3g05002 Beta vulgaris HOM05D002663 ORTHO05D002988 1.0e-17 93.6 85 57.6
CAN.G374.14 Capsicum annuum HOM05D002663 ORTHO05D002988 1.0e-17 93.6 69 66.7
FAN12G2471 Fragaria x ananassa HOM05D002663 ORTHO05D002988 1.0e-17 93.6 61 75.4
PGSC0003DMG400016293 Solanum tuberosum HOM05D002663 ORTHO05D002988 1.0e-17 93.6 68 69.1
Solyc06g053600.4 Solanum lycopersicum HOM05D002663 ORTHO05D002988 1.4e-17 93.2 61 72.1
Eucgr.H03041 Eucalyptus grandis HOM05D002663 ORTHO05D002988 1.8e-17 92.8 62 69.4
Prupe.1G039700 Prunus persica HOM05D002663 ORTHO05D002988 1.8e-17 92.8 69 66.7
Prupe.1G040000 Prunus persica HOM05D002663 ORTHO05D002988 1.8e-17 92.8 61 73.8
Sed0019138 Sechium edule HOM05D002663 ORTHO05D002988 1.8e-17 92.8 82 58.5
Lj3A693T83 Lonicera japonica HOM05D002663 ORTHO05D002988 2.3e-17 92.4 90 54.4
Atru.chr4.2054 Acer truncatum HOM05D002663 ORTHO05D002988 3.0e-17 92.0 74 63.5
Aqoxy2G03650 Aquilegia oxysepala HOM05D002663 ORTHO05D002988 3.0e-17 92.0 67 64.2
Lj3A693T80 Lonicera japonica HOM05D002663 ORTHO05D002988 3.0e-17 92.0 79 58.2
ATR0736G162 Amborella trichopoda HOM05D002663 ORTHO05D002988 4.0e-17 91.7 67 65.7
MSTRG.21915 Avicennia marina HOM05D002663 ORTHO05D002988 4.0e-17 91.7 67 67.2
AUR62002141 Chenopodium quinoa HOM05D002663 ORTHO05D002988 4.0e-17 91.7 94 57.4
FvH4_4g03680 Fragaria vesca HOM05D002663 ORTHO05D002988 4.0e-17 91.7 74 63.5
Os03g0611200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 4.0e-17 91.7 107 51.4
RcHm_v2.0_Chr4g0393291 Rosa chinensis HOM05D002663 ORTHO05D002988 4.0e-17 91.7 70 65.7
Sopen06g018690 Solanum pennellii HOM05D002663 ORTHO05D002988 4.0e-17 91.7 61 70.5
AT1G04420 Arabidopsis thaliana HOM05D002663 ORTHO05D002988 5.2e-17 91.3 67 58.2
Sabra08G0127600 Salix brachista HOM05D000189 ORTHO05D000474 5.2e-17 91.3 71 63.4
Carub.0001s0360 Capsella rubella HOM05D002663 ORTHO05D002988 8.8e-17 90.5 112 45.5
SalBow3G3891 Salvia bowleyana HOM05D002663 ORTHO05D002988 8.8e-17 90.5 58 72.4
Thecc.04G256100 Theobroma cacao HOM05D002663 ORTHO05D002988 8.8e-17 90.5 61 70.5
CSS0029715 Camellia sinensis var. sinensis HOM05D002663 ORTHO05D002988 1.2e-16 90.1 61 70.5
COL.COLO4_15882 Corchorus olitorius HOM05D002663 ORTHO05D002988 1.2e-16 90.1 61 68.9
Migut.N00273 Erythranthe guttata HOM05D002663 ORTHO05D002988 1.2e-16 90.1 107 48.6
GSVIVG01027822001 Vitis vinifera HOM05D002663 ORTHO05D002988 1.2e-16 90.1 65 66.2
Zm00001eb113180 Zea mays HOM05D002663 ORTHO05D002988 1.2e-16 90.1 69 60.9
DCAR_024256 Daucus carota HOM05D002663 ORTHO05D002988 1.5e-16 89.7 67 64.2
Gohir.D01G023000 Gossypium hirsutum HOM05D002663 ORTHO05D002988 1.5e-16 89.7 61 68.9
PGR004G1088 Punica granatum HOM05D002663 ORTHO05D002988 1.5e-16 89.7 96 51.0
RcHm_v2.0_Chr4g0393301 Rosa chinensis HOM05D002663 ORTHO05D002988 1.5e-16 89.7 70 64.3
Sc13g0005480 Simmondsia chinensis HOM05D002663 ORTHO05D002988 1.5e-16 89.7 69 59.4
unitig_26.g9552 Utricularia gibba HOM05D002663 ORTHO05D002988 1.5e-16 89.7 55 76.4
Zm00001eb051500 Zea mays HOM05D002663 ORTHO05D002988 1.5e-16 89.7 69 60.9
Gohir.D01G023100 Gossypium hirsutum HOM05D002663 ORTHO05D002988 2.0e-16 89.4 61 68.9
Gorai.002G025500 Gossypium raimondii HOM05D002663 ORTHO05D002988 2.0e-16 89.4 61 68.9
ClCG04G012670 Citrullus lanatus HOM05D002663 ORTHO05D002988 2.6e-16 89.0 66 62.1
CiPaw.01G184000 Carya illinoinensis HOM05D002663 ORTHO05D002988 3.3e-16 88.6 62 67.7
Haze_11387 Corylus avellana HOM05D002663 ORTHO05D002988 3.3e-16 88.6 72 61.1
PSO063G6804 Papaver somniferum HOM05D002663 ORTHO05D002988 3.3e-16 88.6 58 74.1
Actinidia39905 Actinidia chinensis HOM05D002663 ORTHO05D002988 4.4e-16 88.2 75 61.3
Haze_11388 Corylus avellana HOM05D002663 ORTHO05D002988 4.4e-16 88.2 72 61.1
Dinv29857 Davidia involucrata HOM05D002663 ORTHO05D002988 4.4e-16 88.2 61 67.2
Gohir.A01G024900 Gossypium hirsutum HOM05D002663 ORTHO05D002988 4.4e-16 88.2 61 68.9
MD16G1219600 Malus domestica HOM05D002663 ORTHO05D002988 4.4e-16 88.2 54 77.8
Cfa022963 Carpinus fangiana HOM05D002663 ORTHO05D002988 5.7e-16 87.8 72 59.7
Nn1g02781 Nelumbo nucifera HOM05D002663 ORTHO05D002988 5.7e-16 87.8 89 52.8
PSO017G0007 Papaver somniferum HOM05D002663 ORTHO05D002988 5.7e-16 87.8 99 55.6
THA.LOC104801083 Tarenaya hassleriana HOM05D002663 ORTHO05D002988 7.5e-16 87.4 64 62.5
RcHm_v2.0_Chr4g0393231 Rosa chinensis HOM05D002663 ORTHO05D002988 9.7e-16 87.0 74 58.1
GSVIVG01027820001 Vitis vinifera HOM05D002663 ORTHO05D002988 1.3e-15 86.7 65 64.6
Ciclev10005068m.g Citrus clementina HOM05D002663 ORTHO05D002988 1.7e-15 86.3 70 58.6
vmacro15444 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 1.7e-15 86.3 60 70.0
Ca_12013_v3 Cicer arietinum L. HOM05D002663 ORTHO05D002988 2.2e-15 85.9 106 49.1
Hma1.2p1_0992F.1_g245210 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 2.2e-15 85.9 61 65.6
Potri.008G167400 Populus trichocarpa HOM05D002663 ORTHO05D002988 2.2e-15 85.9 74 56.8
HPP92_008955 Vanilla planifolia HOM05D002663 ORTHO05D002988 2.2e-15 85.9 51 76.5
Aa31LG1G20460 Aethionema arabicum HOM05D002663 ORTHO05D002988 2.8e-15 85.5 55 69.1
Lj6g0014805 Lotus japonicus HOM05D002663 ORTHO05D002988 2.8e-15 85.5 74 60.8
BraA10t42553Z Brassica rapa HOM05D002663 ORTHO05D002988 3.7e-15 85.1 112 44.6
TPR.G9376 Trifolium pratense HOM05D002663 ORTHO05D002988 3.7e-15 85.1 54 75.9
MELO3C001939.2 Cucumis melo HOM05D002663 ORTHO05D002988 4.8e-15 84.7 70 60.0
CsaV3_1G005010 Cucumis sativus L. HOM05D002663 ORTHO05D002988 4.8e-15 84.7 70 60.0
A10p02860 Brassica napus HOM05D002663 ORTHO05D002988 6.3e-15 84.3 109 44.0
Lalb_Chr19g0128191 Lupinus albus HOM05D002663 ORTHO05D002988 6.3e-15 84.3 70 62.9
QL06p018104 Quercus lobata HOM05D002663 ORTHO05D002988 6.3e-15 84.3 69 59.4
arahy.Tifrunner.gnm1.ann1.3DH906 Arachis hypogaea HOM05D002663 ORTHO05D002988 8.2e-15 84.0 61 68.9
arahy.Tifrunner.gnm1.ann1.93JRWW Arachis hypogaea HOM05D002663 ORTHO05D002988 8.2e-15 84.0 61 68.9
Cpa.g.sc44.50 Carica papaya HOM05D002663 ORTHO05D002988 8.2e-15 84.0 102 48.0
Oeu011504.1 Olea europaea HOM05D002663 ORTHO05D002988 8.2e-15 84.0 52 73.1
CANSAT78G1183 Cannabis sativa HOM05D002663 ORTHO05D002988 1.1e-14 83.6 71 57.7
Glyma.02G005200 Glycine max HOM05D002663 ORTHO05D002988 1.1e-14 83.6 55 72.7
Medtr1g042730 Medicago truncatula HOM05D002663 ORTHO05D002988 1.1e-14 83.6 92 51.1
SMO134G0117 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 1.1e-14 83.6 49 75.5
C05p02610 Brassica napus HOM05D002663 ORTHO05D002988 2.4e-14 82.4 55 67.3
Lsat_1_v5_gn_3_120601 Lactuca sativa HOM05D002663 ORTHO05D002988 2.4e-14 82.4 102 47.1
BolC5t29042H Brassica oleracea HOM05D002663 ORTHO05D002988 3.1e-14 82.0 58 67.2
Thhalv10007737m.g Eutrema salsugineum HOM05D002663 ORTHO05D002988 3.1e-14 82.0 69 56.5
Psat6g104760 Pisum sativum HOM05D002663 ORTHO05D002988 3.1e-14 82.0 73 57.5
TPR.G25174 Trifolium pratense HOM05D002663 ORTHO05D002988 3.1e-14 82.0 61 65.6
TAR362G0984 Trochodendron aralioides HOM05D002663 ORTHO05D002988 3.1e-14 82.0 58 67.2
BcaB08g35998 Brassica carinata HOM05D002663 ORTHO05D002988 4.1e-14 81.6 59 61.0
BcaC07g36908 Brassica carinata HOM05D002663 ORTHO05D002988 4.1e-14 81.6 117 45.3
Phvul.007G274000 Phaseolus vulgaris HOM05D002663 ORTHO05D002988 5.3e-14 81.3 109 46.8
VMungo0720G1673 Vigna mungo HOM05D002663 ORTHO05D002988 5.3e-14 81.3 111 44.1
HanXRQChr03g0091441 Helianthus annuus HOM05D002663 ORTHO05D002988 9.1e-14 80.5 54 64.8
SMO274G0009 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 1.6e-13 79.7 49 71.4
MBI07_g16927_MAGBIO Magnolia biondii HOM05D002663 ORTHO05D002988 2.0e-13 79.3 86 52.3
Sp1g03240 Schrenkiella parvula HOM05D002663 ORTHO05D002988 2.0e-13 79.3 51 68.6
TWI09G0632 Tripterygium wilfordii HOM05D002663 ORTHO05D002988 2.0e-13 79.3 53 67.9
Cre10.g461900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 2.7e-13 79.0 88 50.0
ECA240G1813 Erigeron canadensis HOM05D001289 ORTHO05D002298 5.9e-13 77.8 54 64.8
Rhsim02G0037500 Rhododendron simsii HOM05D002663 ORTHO05D002988 6.5e-12 74.3 62 62.9
SGA_v2.0_scaffold31G12664 Striga asiatica HOM05D002663 ORTHO05D002988 8.5e-12 73.9 75 56.0
Zm00001eb007040 Zea mays HOM05D002663 ORTHO05D002988 2.5e-11 72.4 60 56.7
AUR62015567 Chenopodium quinoa HOM05D002663 ORTHO05D002988 4.7e-10 68.2 94 48.9
Zm00001eb150350 Zea mays HOM05D002663 ORTHO05D002988 6.1e-10 67.8 61 55.7
Cre17.g699900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 2.3e-09 65.9 47 61.7
MD13G1214400 Malus domestica HOM05D002663 ORTHO05D002988 4.0e-09 65.1 76 48.7
ECA240G4022 Erigeron canadensis HOM05D002663 ORTHO05D002988 1.3e-07 60.1 51 54.9
MCO11G017 Micromonas commoda HOM05D002663 ORTHO05D002988 2.2e-07 59.3 49 55.1
SMO134G0280 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 8.3e-07 57.4 83 42.2
Manes.03G163800 Manihot esculenta HOM05D002663 ORTHO05D002988 2.4e-06 55.8 31 80.6
CBR_g12486 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-06 53.9 86 37.2


User provided reference genes

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