Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32724 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 2.6e-152 542.0 268 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1085 Anthoceros agrestis HOM05D003290 ORTHO05D003866 2.1e-24 117.1 79 73.4
Mapoly0062s0025 Marchantia polymorpha HOM05D003290 ORTHO05D003866 2.1e-24 117.1 89 70.8
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 8.0e-24 115.2 79 74.7
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 1.0e-23 114.8 79 74.7
Dinv02702 Davidia involucrata HOM05D003290 ORTHO05D003866 2.3e-23 113.6 104 57.7
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 2.3e-23 113.6 104 57.7
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 4.0e-23 112.8 104 57.7
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 4.0e-23 112.8 104 58.7
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 4.0e-23 112.8 104 57.7
Pp3c22_9570 Physcomitrium patens HOM05D003290 ORTHO05D003866 4.0e-23 112.8 77 71.4
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 5.2e-23 112.5 79 75.9
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 1.2e-22 111.3 107 60.7
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 1.2e-22 111.3 98 59.2
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 1.5e-22 110.9 79 73.4
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 2.0e-22 110.5 79 70.9
Pp3c16_14280 Physcomitrium patens HOM05D003290 ORTHO05D003866 2.0e-22 110.5 77 72.7
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 2.6e-22 110.2 79 70.9
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 2.6e-22 110.2 119 53.8
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 2.6e-22 110.2 79 70.9
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 2.6e-22 110.2 104 55.8
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 4.4e-22 109.4 78 73.1
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 5.7e-22 109.0 79 70.9
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 7.5e-22 108.6 78 71.8
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 9.8e-22 108.2 79 70.9
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 9.8e-22 108.2 104 56.7
Cc11_g05270 Coffea canephora HOM05D003290 ORTHO05D003866 1.3e-21 107.8 104 55.8
AL5G11170 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 1.7e-21 107.5 78 71.8
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 1.7e-21 107.5 78 71.8
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.7e-21 107.5 79 70.9
MBI13_g26466_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 2.2e-21 107.1 79 68.4
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 2.2e-21 107.1 78 71.8
AT2G01980 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 2.8e-21 106.7 78 71.8
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 2.8e-21 106.7 78 70.5
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 2.8e-21 106.7 78 70.5
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 3.7e-21 106.3 94 59.6
AagrBONN_evm.TU.Sc2ySwM_344.5331 Anthoceros agrestis HOM05D003290 ORTHO05D003866 4.8e-21 105.9 77 70.1
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 4.8e-21 105.9 78 73.1
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 4.8e-21 105.9 79 68.4
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 6.3e-21 105.5 79 67.1
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 6.3e-21 105.5 79 65.8
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 6.3e-21 105.5 79 65.8
ECA246G3356 Erigeron canadensis HOM05D003290 ORTHO05D003866 8.3e-21 105.1 104 55.8
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 8.3e-21 105.1 79 72.2
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 8.3e-21 105.1 79 72.2
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 8.3e-21 105.1 79 72.2
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 8.3e-21 105.1 78 66.7
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 1.1e-20 104.8 79 67.1
CARHR144580 Cardamine hirsuta HOM05D003290 ORTHO05D003866 1.1e-20 104.8 78 70.5
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 1.1e-20 104.8 79 68.4
Thhalv10003547m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 1.4e-20 104.4 78 71.8
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 1.8e-20 104.0 79 68.4
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 2.4e-20 103.6 78 65.4
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 2.4e-20 103.6 78 65.4
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 2.4e-20 103.6 78 65.4
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 2.4e-20 103.6 78 66.7
A09p23700 Brassica napus HOM05D003290 ORTHO05D003866 3.1e-20 103.2 78 70.5
BolC9t55917H Brassica oleracea HOM05D003290 ORTHO05D003866 3.1e-20 103.2 78 70.5
BraA09t37969Z Brassica rapa HOM05D003290 ORTHO05D003866 3.1e-20 103.2 78 70.5
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 3.1e-20 103.2 78 67.9
CDE06G1581 Ceratophyllum demersum HOM05D003290 ORTHO05D003866 3.1e-20 103.2 79 64.6
SMO367G0300 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 3.1e-20 103.2 77 66.2
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 3.1e-20 103.2 102 54.9
BcaC04g21541 Brassica carinata HOM05D003290 ORTHO05D003866 4.1e-20 102.8 78 69.2
C09p30540 Brassica napus HOM05D003290 ORTHO05D003866 4.1e-20 102.8 78 69.2
MD16G1011500 Malus domestica HOM05D003290 ORTHO05D003866 4.1e-20 102.8 78 65.4
MD13G1014200 Malus domestica HOM05D003290 ORTHO05D003866 5.4e-20 102.4 78 65.4
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 5.4e-20 102.4 79 68.4
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 7.0e-20 102.1 78 70.5
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 7.0e-20 102.1 103 54.4
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 9.1e-20 101.7 78 65.4
Sp2g13410 Schrenkiella parvula HOM05D003290 ORTHO05D003866 9.1e-20 101.7 78 67.9
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 9.1e-20 101.7 79 65.8
Carub.0005s0099 Capsella rubella HOM05D003290 ORTHO05D003866 1.2e-19 101.3 78 66.7
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 1.2e-19 101.3 104 54.8
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 1.6e-19 100.9 78 65.4
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 1.6e-19 100.9 104 54.8
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 1.6e-19 100.9 79 68.4
Sopen04g009310 Solanum pennellii HOM05D003290 ORTHO05D003866 1.6e-19 100.9 82 61.0
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 1.6e-19 100.9 79 68.4
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 1.6e-19 100.9 78 66.7
DCAR_030316 Daucus carota HOM05D003290 ORTHO05D003866 2.0e-19 100.5 79 67.1
Nitab4.5_0005031g0060 Nicotiana tabacum HOM05D003290 ORTHO05D003866 2.0e-19 100.5 78 62.8
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 2.0e-19 100.5 78 61.5
Thhalv10006906m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 3.5e-19 99.8 78 64.1
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 3.5e-19 99.8 78 64.1
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 3.5e-19 99.8 78 64.1
Zm00001eb033240 Zea mays HOM05D003290 ORTHO05D003866 3.5e-19 99.8 79 64.6
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 4.5e-19 99.4 78 66.7
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 4.5e-19 99.4 85 62.4
Sp1g13030 Schrenkiella parvula HOM05D003290 ORTHO05D003866 4.5e-19 99.4 84 58.3
Solyc04g018100.4 Solanum lycopersicum HOM05D003290 ORTHO05D003866 4.5e-19 99.4 79 60.8
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 4.5e-19 99.4 104 54.8
FvH4_4g35890 Fragaria vesca HOM05D003290 ORTHO05D003866 5.9e-19 99.0 78 62.8
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 5.9e-19 99.0 94 54.3
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 5.9e-19 99.0 104 54.8
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 7.7e-19 98.6 84 61.9
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 7.7e-19 98.6 84 61.9
Os12g0641100 Oryza sativa ssp. japonica HOM05D003290 ORTHO05D003866 7.7e-19 98.6 79 60.8
AT1G14660 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 1.3e-18 97.8 78 65.4
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 1.3e-18 97.8 84 59.5
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.3e-18 97.8 79 62.0
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 1.3e-18 97.8 79 65.8
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 1.3e-18 97.8 78 64.1
PGR102G1943 Punica granatum HOM05D003290 ORTHO05D003866 1.3e-18 97.8 78 55.1
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.7e-18 97.4 104 54.8
Sp1g13020 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.7e-18 97.4 77 66.2
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 2.3e-18 97.1 88 56.8
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 2.9e-18 96.7 104 54.8
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 5.0e-18 95.9 78 62.8
BcaB02g06535 Brassica carinata HOM05D003290 ORTHO05D003866 6.6e-18 95.5 76 64.5
Carub.0001s1442 Capsella rubella HOM05D003290 ORTHO05D003866 6.6e-18 95.5 78 64.1
A06p10710 Brassica napus HOM05D003290 ORTHO05D003866 1.1e-17 94.7 78 62.8
Sp1g13040 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.1e-17 94.7 78 65.4
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 1.9e-17 94.0 78 60.3
BraA06t24252Z Brassica rapa HOM05D003290 ORTHO05D003866 2.5e-17 93.6 78 61.5
BcaC05g25383 Brassica carinata HOM05D003290 ORTHO05D003866 4.2e-17 92.8 78 60.3
C05p12620 Brassica napus HOM05D003290 ORTHO05D003866 4.2e-17 92.8 78 60.3
BolC5t30005H Brassica oleracea HOM05D003290 ORTHO05D003866 4.2e-17 92.8 78 60.3
PSO339G1388 Papaver somniferum HOM05D003290 ORTHO05D003866 4.2e-17 92.8 79 59.5
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 5.5e-17 92.4 79 59.5
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 9.5e-17 91.7 61 68.9
Aa31LG2G2650 Aethionema arabicum HOM05D003290 ORTHO05D003866 1.6e-16 90.9 83 57.8
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 2.8e-16 90.1 70 62.9
Lsat_1_v5_gn_6_55260 Lactuca sativa HOM05D003290 ORTHO05D003866 3.6e-16 89.7 119 47.1
SMO367G0872 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 3.6e-16 89.7 78 61.5
arahy.Tifrunner.gnm1.ann1.GRN8HF Arachis hypogaea HOM05D003290 ORTHO05D003866 1.8e-15 87.4 62 66.1
CARHR015150 Cardamine hirsuta HOM05D003290 ORTHO05D003866 8.9e-15 85.1 59 69.5
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.5e-14 84.3 74 58.1
SEGI_23939 Sequoiadendron giganteum HOM05D000372 ORTHO05D002769 5.7e-14 82.4 40 95.0
vmacro10756 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 5.7e-14 82.4 74 52.7
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 1.3e-13 81.3 66 60.6
SEGI_03573 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 4.9e-13 79.3 38 94.7
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 8.3e-13 78.6 51 72.5
SEGI_27514 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 2.4e-12 77.0 38 92.1
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.2e-11 74.7 76 53.9
SEGI_27797 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 5.0e-10 69.3 37 83.8


User provided reference genes

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