Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 8.0e-49 196.8 103 100.0
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 7.3e-18 94.0 88 50.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.2e-17 90.9 87 48.3
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.1e-16 90.1 87 48.3
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.1e-16 90.1 87 48.3
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.1e-16 90.1 78 56.4
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.4e-16 89.7 88 46.6
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.4e-16 89.7 78 53.8
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.1e-16 88.6 76 56.6
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.0e-16 88.2 88 45.5
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 4.0e-16 88.2 76 53.9
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.3e-16 87.8 89 49.4
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 5.3e-16 87.8 99 47.5
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 5.3e-16 87.8 99 45.5
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 9.0e-16 87.0 83 48.2
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.5e-15 86.3 88 45.5
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.5e-15 86.3 88 46.6
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.5e-15 86.3 84 48.8
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.6e-15 85.5 88 45.5
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 4.4e-15 84.7 78 47.4
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 4.4e-15 84.7 78 47.4
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 5.8e-15 84.3 82 45.1
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 7.6e-15 84.0 78 47.4
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 7.6e-15 84.0 83 47.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.6e-15 84.0 79 51.9
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 9.9e-15 83.6 79 45.6
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 9.9e-15 83.6 88 44.3
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 9.9e-15 83.6 85 44.7
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 9.9e-15 83.6 85 47.1
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 9.9e-15 83.6 78 52.6
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 9.9e-15 83.6 101 42.6
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 9.9e-15 83.6 78 47.4
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.3e-14 83.2 97 43.3
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 1.3e-14 83.2 83 48.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.3e-14 83.2 79 45.6
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.3e-14 83.2 80 51.2
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.7e-14 82.8 80 47.5
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 1.7e-14 82.8 91 45.1
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.9e-14 82.0 101 42.6
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 3.8e-14 81.6 85 44.7
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 3.8e-14 81.6 91 39.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 3.8e-14 81.6 88 45.5
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 3.8e-14 81.6 88 46.6
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 4.9e-14 81.3 101 41.6
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 6.4e-14 80.9 85 48.2
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 6.4e-14 80.9 93 44.1
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.4e-14 80.9 93 44.1
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 6.4e-14 80.9 93 44.1
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.4e-14 80.5 101 41.6
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 8.4e-14 80.5 101 42.6
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.1e-13 80.1 91 39.6
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.1e-13 80.1 78 43.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.1e-13 80.1 78 43.6
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.1e-13 80.1 78 43.6
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.1e-13 80.1 90 44.4
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 1.1e-13 80.1 88 42.0
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.4e-13 79.7 93 40.9
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.9e-13 79.3 84 44.0
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.9e-13 79.3 84 45.2
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 2.4e-13 79.0 77 45.5
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 2.4e-13 79.0 88 42.0
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 2.4e-13 79.0 87 43.7
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 2.4e-13 79.0 87 41.4
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 3.2e-13 78.6 87 42.5
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 3.2e-13 78.6 77 44.2
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 4.2e-13 78.2 96 38.5
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.2e-13 78.2 93 41.9
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 7.1e-13 77.4 99 40.4
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 7.1e-13 77.4 85 45.9
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 7.1e-13 77.4 75 45.3
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 9.3e-13 77.0 97 39.2
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.1e-12 75.9 55 63.6
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.1e-12 75.9 70 47.1
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 2.7e-12 75.5 96 39.6
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.5e-12 75.1 87 40.2
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 6.0e-12 74.3 70 45.7
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 6.0e-12 74.3 70 45.7
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.0e-11 73.6 91 42.9
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.3e-11 73.2 75 46.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 2.3e-11 72.4 84 42.9
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 8.7e-11 70.5 82 43.9
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 9.6e-10 67.0 99 33.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.6e-09 66.2 72 38.9
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 2.1e-09 65.9 77 40.3
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.8e-09 65.5 68 44.1
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 8.4e-06 53.9 53 47.2


User provided reference genes

Program Settings