Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03646 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 4.8e-188 661.0 329 100.0
SEGI_32709 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 4.8e-188 661.0 329 100.0
SEGI_13825 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 3.1e-86 322.8 306 58.2
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.5e-64 250.8 303 49.2
SEGI_24229 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 5.7e-64 248.8 286 50.3
SEGI_11533 Sequoiadendron giganteum HOM05D000413 ORTHO05D000292 5.7e-48 195.7 312 41.0
SEGI_36207 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 2.8e-47 193.4 220 54.1
SEGI_14642 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.5e-45 186.4 340 40.0
SEGI_36361 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 9.8e-40 168.3 158 55.7
SEGI_13005 Sequoiadendron giganteum HOM05D011934 ORTHO05D000002 1.1e-38 164.9 296 37.8
SEGI_04299 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.8e-33 147.5 109 67.0
SEGI_28918 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.8e-33 145.6 279 38.0
SEGI_03170 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.4e-32 143.3 109 65.1
SEGI_11549 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.4e-32 143.3 109 65.1
SEGI_09932 Sequoiadendron giganteum HOM05D011934 ORTHO05D008609 5.7e-32 142.5 319 35.4
SEGI_14215 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 7.5e-32 142.1 168 50.0
SEGI_19741 Sequoiadendron giganteum HOM05D011934 ORTHO05D000002 1.1e-30 138.3 212 42.0
SEGI_13191 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 7.8e-29 132.1 185 44.9
SEGI_35863 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 2.0e-21 107.5 83 69.9
SEGI_27260 Sequoiadendron giganteum HOM05D011934 ORTHO05D000002 1.7e-20 104.4 77 63.6
SEGI_34442 Sequoiadendron giganteum HOM05D011934 ORTHO05D012968 3.9e-20 103.2 95 58.9
SEGI_39981 Sequoiadendron giganteum HOM05D011934 ORTHO05D000646 7.3e-19 99.0 228 34.2
SEGI_36731 Sequoiadendron giganteum HOM05D000646 ORTHO05D000607 3.6e-18 96.7 136 42.6
SEGI_00027 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.2e-16 91.7 79 59.5
SEGI_12083 Sequoiadendron giganteum HOM05D000978 ORTHO05D000813 4.4e-16 89.7 66 69.7
SEGI_09639 Sequoiadendron giganteum HOM05D000088 ORTHO05D386001 1.7e-15 87.8 107 51.4
SEGI_15025 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.2e-15 87.4 104 50.0
SEGI_39692 Sequoiadendron giganteum HOM05D017626 ORTHO05D384191 6.4e-15 85.9 99 50.5
SEGI_17971 Sequoiadendron giganteum HOM05D000279 ORTHO05D000957 1.6e-13 81.3 57 71.9
SEGI_25691 Sequoiadendron giganteum HOM05D002514 ORTHO05D002761 1.3e-12 78.2 115 43.5
SEGI_02211 Sequoiadendron giganteum HOM05D009239 ORTHO05D026139 2.3e-12 77.4 90 50.0
SEGI_21285 Sequoiadendron giganteum HOM05D003185 ORTHO05D007711 3.9e-12 76.6 55 63.6
SEGI_27708 Sequoiadendron giganteum HOM05D017626 ORTHO05D000002 5.1e-12 76.3 50 68.0
SEGI_09223 Sequoiadendron giganteum HOM05D000464 ORTHO05D000408 2.5e-11 73.9 118 42.4
SEGI_08407 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.3e-11 73.2 121 43.8
SEGI_17736 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 9.5e-11 72.0 110 44.5
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.2e-10 71.6 60 53.3
SEGI_05085 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.6e-10 71.2 60 55.0
SEGI_08106 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-10 71.2 60 56.7
SEGI_39939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.7e-10 69.7 59 61.0
SEGI_41350 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.1e-10 68.9 53 60.4
SEGI_24053 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.8e-09 67.8 77 51.9
SEGI_33810 Sequoiadendron giganteum HOM05D004877 ORTHO05D000002 2.3e-09 67.4 45 66.7
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 5.2e-09 66.2 60 50.0
SEGI_39384 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.9e-09 65.5 53 50.9
SEGI_12759 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.2e-08 65.1 77 53.2
SEGI_31817 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.2e-08 65.1 77 53.2
SEGI_21499 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.5e-08 64.7 59 50.8
SEGI_25655 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 2.0e-08 64.3 69 53.6
SEGI_33041 Sequoiadendron giganteum HOM05D034680 ORTHO05D000002 2.6e-08 63.9 78 51.3
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.4e-08 63.5 51 60.8
SEGI_01166 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.4e-08 63.2 83 45.8
SEGI_04517 Sequoiadendron giganteum HOM05D000758 ORTHO05D012189 4.4e-08 63.2 59 61.0
SEGI_17575 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.4e-08 63.2 83 45.8
SEGI_38021 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 7.5e-08 62.4 46 67.4
SEGI_24522 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.9e-07 59.7 49 53.1
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 4.9e-07 59.7 65 52.3
SEGI_12793 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.1e-06 58.5 60 51.7
PSO170G0033 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.8 59 40.7
PSO210G3715 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.8 59 40.7
CSS0011164 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-06 57.4 72 40.3
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 2.4e-06 57.4 59 40.7
SEGI_12048 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.4e-06 57.4 57 52.6
SEGI_12693 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.4e-06 57.4 110 38.2
FvH4_4g06571 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-06 56.6 91 35.2
FvH4_5g33111 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-06 56.6 60 41.7
PSO675G3884 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-06 56.6 58 46.6
SEGI_26766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.1e-06 56.6 129 34.9
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.4e-06 56.2 59 40.7
PSO170G1719 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 52 44.2
PSO210G4037 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 59 40.7
PGSC0003DMG400009134 Solanum tuberosum HOM05D000004 ORTHO05D000002 5.4e-06 56.2 59 40.7
TPR.G20233 Trifolium pratense HOM05D000004 ORTHO05D000002 5.4e-06 56.2 59 44.1
CSS0023312 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-06 55.8 72 38.9
CSS0026486 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-06 55.8 60 36.7
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 55.8 127 26.8
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 7.1e-06 55.8 59 44.1
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 7.1e-06 55.8 59 44.1
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 7.1e-06 55.8 59 42.4
RcHm_v2.0_Chr4g0399111 Rosa chinensis HOM05D000004 ORTHO05D000002 7.1e-06 55.8 59 37.3
CsaV3_2G024670 Cucumis sativus L. HOM05D000004 ORTHO05D000002 9.2e-06 55.5 102 31.4
Duzib235G1212 Durio zibethinus HOM05D000004 ORTHO05D000002 9.2e-06 55.5 57 40.4
Hma1.2p1_0050F.1_g029020 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.2e-06 55.5 52 42.3
PSO170G0361 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-06 55.5 59 40.7
PSO170G6515 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-06 55.5 61 37.7
PSO675G6894 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-06 55.5 59 42.4


User provided reference genes

Program Settings