Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.6e-115 418.7 205 100.0
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.7e-42 176.8 189 48.7
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.2e-42 176.4 119 69.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.9e-42 176.0 108 74.1
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.9e-42 176.0 181 52.5
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 3.8e-42 175.6 108 72.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 3.8e-42 175.6 112 69.6
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 3.8e-42 175.6 168 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 8.5e-42 174.5 164 53.0
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 8.5e-42 174.5 180 50.0
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.1e-41 174.1 175 50.9
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.4e-41 173.7 157 56.7
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.9e-41 173.3 109 71.6
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.9e-41 173.3 202 49.0
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.9e-41 173.3 181 51.9
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.9e-41 173.3 108 72.2
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.9e-41 173.3 108 72.2
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.9e-41 173.3 108 70.4
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.5e-41 172.9 108 73.1
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.5e-41 172.9 108 72.2
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 3.2e-41 172.6 108 72.2
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 3.2e-41 172.6 158 54.4
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 4.2e-41 172.2 108 72.2
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 4.2e-41 172.2 108 71.3
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 5.5e-41 171.8 108 73.1
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 5.5e-41 171.8 189 53.4
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 7.2e-41 171.4 157 54.1
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 7.2e-41 171.4 108 72.2
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 7.2e-41 171.4 108 71.3
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 9.4e-41 171.0 179 48.0
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.6e-40 170.2 108 72.2
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.6e-40 170.2 104 74.0
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.6e-40 170.2 108 68.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 1.6e-40 170.2 124 66.9
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 70.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 70.4
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 70.4
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 69.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 69.4
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 2.1e-40 169.9 178 50.6
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 2.1e-40 169.9 108 70.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 2.7e-40 169.5 108 70.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.7e-40 169.5 108 72.2
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.7e-40 169.5 119 66.4
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 2.7e-40 169.5 108 67.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 2.7e-40 169.5 108 68.5
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 3.6e-40 169.1 108 70.4
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.6e-40 169.1 108 70.4
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.6e-40 169.1 108 70.4
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.6e-40 169.1 108 70.4
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 4.7e-40 168.7 108 70.4
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 4.7e-40 168.7 108 70.4
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 4.7e-40 168.7 108 66.7
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 4.7e-40 168.7 108 67.6
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 6.1e-40 168.3 186 47.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 6.1e-40 168.3 108 69.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.1e-40 168.3 108 69.4
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 6.1e-40 168.3 108 66.7
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 7.9e-40 167.9 108 68.5
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 7.9e-40 167.9 172 52.3
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 7.9e-40 167.9 108 68.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.0e-39 167.5 111 68.5
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.0e-39 167.5 111 69.4
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.0e-39 167.5 193 46.1
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.0e-39 167.5 101 76.2
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.8e-39 166.8 108 69.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 2.3e-39 166.4 174 50.0
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 2.3e-39 166.4 108 72.2
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.0e-39 166.0 108 69.4
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.0e-39 166.0 108 66.7
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.0e-39 166.0 108 66.7
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 3.0e-39 166.0 108 66.7
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 3.0e-39 166.0 111 65.8
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 3.9e-39 165.6 108 69.4
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 5.2e-39 165.2 111 66.7
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 5.2e-39 165.2 174 49.4
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 5.2e-39 165.2 108 70.4
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 5.2e-39 165.2 108 66.7
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 6.7e-39 164.9 180 50.6
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 8.8e-39 164.5 117 66.7
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 1.5e-38 163.7 117 66.7
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.5e-38 163.7 108 67.6
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 2.0e-38 163.3 117 65.8
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 4.4e-38 162.2 117 65.8
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 5.7e-38 161.8 117 65.8
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.7e-38 161.8 117 65.8
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 7.4e-38 161.4 111 65.8
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.8e-37 159.5 108 65.7
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.8e-37 159.5 108 65.7
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.8e-37 159.5 111 64.9
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 4.8e-37 158.7 111 64.0
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 6.3e-37 158.3 113 60.2
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 3.1e-36 156.0 108 69.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.1e-36 155.6 179 46.4
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 9.1e-36 154.5 109 68.8
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.2e-35 154.1 108 63.9
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 5.9e-35 151.8 167 48.5
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.3e-34 150.6 144 53.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 2.9e-34 149.4 154 51.3
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.5e-33 147.1 103 62.1
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.7e-32 142.9 104 61.5
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.7e-32 142.9 104 61.5
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 3.6e-32 142.5 100 64.0
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 3.3e-30 136.0 111 57.7
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.8e-28 130.2 85 69.4
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 7.0e-28 128.3 84 66.7
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.1e-25 120.9 145 44.1
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 2.5e-25 119.8 157 43.9
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 1.6e-24 117.1 94 52.1
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.6e-24 117.1 86 65.1
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 4.7e-24 115.5 92 53.3
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 2.6e-22 109.8 117 44.4
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.2e-16 90.9 64 60.9
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 3.4e-06 56.2 45 60.0
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 9.8e-06 54.7 45 55.6


User provided reference genes

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