Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32599 Sequoiadendron giganteum HOM05D017181 ORTHO05D384575 1.3e-158 563.1 318 100.0
SEGI_23569 Sequoiadendron giganteum HOM05D017181 ORTHO05D386809 5.2e-30 136.0 101 68.3
SEGI_06394 Sequoiadendron giganteum HOM05D017181 ORTHO05D386311 2.4e-27 127.1 94 69.1
SEGI_41329 Sequoiadendron giganteum HOM05D017181 ORTHO05D000001 1.6e-26 124.4 86 70.9
SEGI_25602 Sequoiadendron giganteum HOM05D003736 ORTHO05D004451 1.9e-24 117.5 151 66.9
SEGI_32835 Sequoiadendron giganteum HOM05D000006 ORTHO05D384570 7.5e-21 105.5 165 54.5
SEGI_17650 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.4e-20 102.4 181 38.1
SEGI_21366 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.7e-18 97.1 189 37.0
SEGI_00912 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.0e-17 93.6 175 37.7
SEGI_32299 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.9e-12 77.0 117 39.3
HanXRQChr14g0436351 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-11 73.9 230 28.7
HanXRQChr02g0039101 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-10 71.6 234 27.8
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 71.2 193 30.1
SEGI_23156 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-10 71.2 194 27.3
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 2.7e-10 70.5 184 33.7
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-10 68.9 191 30.4
SEGI_00135 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.8e-10 68.9 213 29.6
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-09 68.6 207 30.9
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.3e-09 67.4 171 31.0
SEGI_12176 Sequoiadendron giganteum HOM05D017181 ORTHO05D020267 3.0e-09 67.0 90 40.0
Sopen05g014030 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-09 67.0 183 29.0
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-09 66.6 207 30.4
SEGI_16860 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.9e-09 66.6 147 32.0
ECA246G0166 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-09 66.2 206 29.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-09 66.2 187 29.4
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-09 66.2 189 34.4
SEGI_10349 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 5.1e-09 66.2 178 27.0
Sopen12g027470 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-09 66.2 206 27.2
ECA240G1528 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-09 65.9 216 27.3
SHI02145 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-09 65.9 188 33.5
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 8.6e-09 65.5 191 27.2
SHI19839 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-09 65.5 189 34.4
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-09 65.5 197 27.9
SHI50889 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-09 65.5 205 27.3
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-08 65.1 189 29.1
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-08 65.1 165 30.3
ECA238G4552 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 64.7 217 28.1
ECA247G0316 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 64.7 218 27.5
HanXRQChr07g0196691 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-08 64.7 235 28.1
HanXRQChr11g0322801 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-08 64.7 234 27.4
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-08 64.7 189 30.7
SHI23401 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-08 64.3 189 33.9
SEGI_31074 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.9e-08 64.3 188 28.2
Sopen05g025660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-08 64.3 199 26.6
MD01G1129400 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-08 63.9 197 29.4
SHI07648 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-08 63.9 197 27.4
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-08 63.5 187 28.9
Sopen05g015610 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-08 63.5 203 26.1
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 63.2 200 29.5
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 63.2 189 28.0
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 63.2 218 26.6
SHI27797 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-08 63.2 197 26.9
ECA247G3087 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-08 62.8 219 26.9
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-08 62.8 197 27.4
SEGI_04220 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.6e-08 62.8 147 32.7
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 7.3e-08 62.4 209 26.3
MD08G1027200 Malus domestica HOM05D000002 ORTHO05D000001 7.3e-08 62.4 198 27.3
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-08 62.4 187 27.8
SHI27456 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-08 62.4 210 30.5
CSS0008639 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-08 62.0 198 26.3
ECA247G1168 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-08 62.0 221 26.7
SHI06745 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-08 62.0 197 26.9
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-08 62.0 197 27.9
SEGI_26562 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.5e-08 62.0 188 27.1
TPR.G33268 Trifolium pratense HOM05D000002 ORTHO05D000001 9.5e-08 62.0 187 26.7
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 61.6 234 26.1
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 61.6 197 26.9
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 61.6 229 25.8
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 61.6 197 25.9
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 61.6 192 27.6
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 181 28.7
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 201 27.9
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 201 27.9
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 201 27.9
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 176 33.5
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 61.2 201 27.9
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 61.2 177 28.2
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 61.2 197 27.4
HanXRQChr06g0174011 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-07 60.8 230 24.3
MD03G1006900 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-07 60.8 196 28.6
SHI18908 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 60.8 182 27.5
Sopen04g009330 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 60.8 198 29.8
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-07 60.5 174 26.4
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-07 60.5 176 29.0
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-07 60.5 88 40.9
SEGI_22044 Sequoiadendron giganteum HOM05D000015 ORTHO05D050993 2.8e-07 60.5 181 28.7
SEGI_35325 Sequoiadendron giganteum HOM05D000002 ORTHO05D050993 2.8e-07 60.5 181 28.7
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 60.1 217 26.7
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 60.1 214 27.1
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-07 60.1 179 27.9
CSS0030817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-07 59.7 186 25.8
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-07 59.7 181 28.2
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-07 59.7 201 27.4
MD03G1131300 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-07 59.7 198 26.3
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 59.7 179 29.1
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-07 59.7 196 29.1
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.2e-07 59.3 209 29.2
Ca_13573_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.2e-07 59.3 198 29.3
Ca_25407_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.2e-07 59.3 198 29.3
Ca_27553_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.2e-07 59.3 198 29.3
HanXRQChr12g0366491 Helianthus annuus HOM05D000002 ORTHO05D000001 6.2e-07 59.3 233 26.2
SHI18423 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-07 59.3 229 25.8
Sopen03g007400 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-07 59.3 213 26.8
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 6.2e-07 59.3 198 29.8
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-07 58.9 181 29.3
CSS0044837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-07 58.9 198 25.3
CSS0050085 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-07 58.9 198 25.3
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-07 58.9 207 30.4
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 8.1e-07 58.9 198 28.3
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 58.5 226 26.5
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 58.5 207 27.1
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-06 58.5 233 27.5
Sopen12g022250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.5 208 26.9
ECA238G2859 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 58.2 234 25.2
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 58.2 214 27.1
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 1.4e-06 58.2 232 26.7
MD06G1120600 Malus domestica HOM05D000002 ORTHO05D000001 1.4e-06 58.2 204 31.4
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-06 58.2 198 28.3
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 58.2 189 27.5
SHI16257 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 58.2 198 26.8
SHI47860 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 58.2 198 26.8
SEGI_32148 Sequoiadendron giganteum HOM05D000002 ORTHO05D030602 1.4e-06 58.2 177 32.2
Sopen07g019560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 58.2 186 26.3
Sopen08g001690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 58.2 174 29.3
TPR.G23755 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-06 58.2 216 28.2
Ah.03g143770 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.8e-06 57.8 172 27.9
HanXRQChr14g0456471 Helianthus annuus HOM05D000103 ORTHO05D000001 1.8e-06 57.8 234 24.4
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-06 57.8 198 28.3
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-06 57.8 198 28.3
SHI12754 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.8 189 25.4
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.8 178 28.7
SHI49905 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.8 178 27.5
SHI51724 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.8 178 27.5
SEGI_39813 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.8e-06 57.8 172 27.3
Sopen01g018550 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.8 177 31.6
ECA232G4093 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 57.4 235 26.0
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 57.4 191 27.7
SEGI_01629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.3e-06 57.4 192 28.1
Sopen01g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
Sopen01g025590 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
Sopen01g025600 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
Sopen04g013470 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
Sopen12g027910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.4 176 31.2
ECA246G2006 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 57.0 190 26.8
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 57.0 191 27.7
FvH4_3g03543 Fragaria vesca HOM05D000002 ORTHO05D000001 3.1e-06 57.0 196 26.0
HanXRQChr06g0173631 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-06 57.0 216 27.3
HanXRQChr09g0272931 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-06 57.0 229 27.1
SHI04821 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 57.0 196 28.6
Sopen12g009690 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 57.0 176 31.2
CSS0024117 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.6 183 27.3
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-06 56.6 191 26.7
ECA240G1692 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-06 56.6 201 29.4
FvH4_4g30271 Fragaria vesca HOM05D000002 ORTHO05D000001 4.0e-06 56.6 203 27.1
MD16G1192200 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-06 56.6 203 26.6
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-06 56.6 215 27.4
SHI12852 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 56.6 187 27.3
Sopen10g020560 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-06 56.6 175 30.3
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 198 28.8
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 202 28.7
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 200 26.5
MD07G1028600 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-06 56.2 203 26.6
SHI03936 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 56.2 190 24.2
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 56.2 212 25.5
Sopen07g008090 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 56.2 176 30.7
Ah.05g178610 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.8e-06 55.8 209 26.8
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.8 191 27.2
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.8 189 28.6
MD17G1077500 Malus domestica HOM05D000002 ORTHO05D000001 6.8e-06 55.8 203 26.1
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 6.8e-06 55.8 193 29.0
SHI05652 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 55.8 182 24.7
Sopen06g014770 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.8 197 29.4
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-06 55.5 196 25.0
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-06 55.5 226 25.7
ECA246G2137 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-06 55.5 258 27.1
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-06 55.5 187 26.7
SEGI_06619 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 8.9e-06 55.5 81 34.6


User provided reference genes

Program Settings