Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32508 Sequoiadendron giganteum HOM05D016368 ORTHO05D383816 3.9e-290 1000.7 497 100.0
SEGI_15668 Sequoiadendron giganteum HOM05D016368 ORTHO05D386610 3.5e-243 844.7 531 81.9
SEGI_31423 Sequoiadendron giganteum HOM05D016368 ORTHO05D384169 7.0e-183 644.4 525 64.4
SEGI_23680 Sequoiadendron giganteum HOM05D016368 ORTHO05D384443 2.2e-99 367.1 267 68.2
SEGI_05056 Sequoiadendron giganteum HOM05D016368 ORTHO05D384323 2.9e-67 260.4 499 34.9
SEGI_31776 Sequoiadendron giganteum HOM05D016368 ORTHO05D385762 5.9e-65 252.7 530 32.6
SEGI_20171 Sequoiadendron giganteum HOM05D016368 ORTHO05D385695 1.6e-46 191.4 414 34.8
SEGI_34280 Sequoiadendron giganteum HOM05D016368 ORTHO05D386813 3.1e-13 80.9 103 40.8
Mapoly0003s0073 Marchantia polymorpha HOM05D001406 ORTHO05D002467 3.0e-08 64.3 69 49.3
FAN26G3043 Fragaria x ananassa HOM05D001406 ORTHO05D002467 1.1e-07 62.4 122 33.6
FvH4_1g03490 Fragaria vesca HOM05D001406 ORTHO05D002467 1.9e-07 61.6 117 34.2
FAN19G3152 Fragaria x ananassa HOM05D001406 ORTHO05D002467 1.9e-07 61.6 117 34.2
FAN26G0469 Fragaria x ananassa HOM05D001406 ORTHO05D002467 1.9e-07 61.6 117 34.2
FAN23G0167 Fragaria x ananassa HOM05D001406 ORTHO05D002467 4.3e-07 60.5 71 43.7
FAN28G0695 Fragaria x ananassa HOM05D001406 ORTHO05D002467 4.3e-07 60.5 71 43.7
PSO170G1851 Papaver somniferum HOM05D001406 ORTHO05D002467 4.3e-07 60.5 69 43.5
PSO455G0120 Papaver somniferum HOM05D001406 ORTHO05D002467 4.3e-07 60.5 69 43.5
Aqoxy7G03718 Aquilegia oxysepala HOM05D001406 ORTHO05D002467 7.4e-07 59.7 69 43.5
ATR0322G047 Amborella trichopoda HOM05D001406 ORTHO05D002467 2.2e-06 58.2 71 42.3
Cpa.g.sc75.45 Carica papaya HOM05D001406 ORTHO05D002467 2.2e-06 58.2 69 42.0
HanXRQChr09g0242301 Helianthus annuus HOM05D001406 ORTHO05D002467 2.2e-06 58.2 71 42.3
TAR383G0949 Trochodendron aralioides HOM05D001406 ORTHO05D002467 2.2e-06 58.2 73 39.7
MELO3C010356.2 Cucumis melo HOM05D001406 ORTHO05D002467 2.8e-06 57.8 69 40.6
Oeu018465.1 Olea europaea HOM05D001406 ORTHO05D002467 2.8e-06 57.8 71 40.8
CANSAT11G2034 Cannabis sativa HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 43.5
CsaV3_1G029930 Cucumis sativus L. HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 40.6
Hma1.2p1_0665F.1_g199020 Hydrangea macrophylla HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 42.0
Nn8g39432 Nelumbo nucifera HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 42.0
Sed0009507 Sechium edule HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 40.6
Sed0020689 Sechium edule HOM05D001406 ORTHO05D002467 3.7e-06 57.4 69 40.6
Zm00001eb162560 Zea mays HOM05D001406 ORTHO05D002467 3.7e-06 57.4 63 42.9
Zm00001eb342290 Zea mays HOM05D001406 ORTHO05D002467 3.7e-06 57.4 63 42.9
Carub.0005s2419 Capsella rubella HOM05D001406 ORTHO05D002467 4.8e-06 57.0 69 40.6
Migut.G00775 Erythranthe guttata HOM05D001406 ORTHO05D002467 4.8e-06 57.0 71 40.8
SMO367G0943 Selaginella moellendorffii HOM05D001406 ORTHO05D002467 4.8e-06 57.0 83 38.6
vmacro15226 Vaccinium macrocarpon HOM05D001406 ORTHO05D002467 4.8e-06 57.0 149 28.9
HPP92_021813 Vanilla planifolia HOM05D001406 ORTHO05D002467 4.8e-06 57.0 92 33.7
MSTRG.9792 Avicennia marina HOM05D001406 ORTHO05D002467 6.3e-06 56.6 71 39.4
Dinv41518 Davidia involucrata HOM05D001406 ORTHO05D002467 6.3e-06 56.6 69 42.0
Eucgr.C01157 Eucalyptus grandis HOM05D001406 ORTHO05D002467 6.3e-06 56.6 69 40.6
MD02G1033900 Malus domestica HOM05D001406 ORTHO05D002467 6.3e-06 56.6 69 40.6
MD15G1174700 Malus domestica HOM05D001406 ORTHO05D002467 6.3e-06 56.6 69 40.6
TAR636G2776 Trochodendron aralioides HOM05D001406 ORTHO05D002467 6.3e-06 56.6 69 40.6
Atru.chr7.1222 Acer truncatum HOM05D001406 ORTHO05D002467 8.2e-06 56.2 69 42.0
CSS0022258 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D002467 8.2e-06 56.2 69 40.6
CSS0043323 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D002467 8.2e-06 56.2 69 40.6
Ciclev10008750m.g Citrus clementina HOM05D001406 ORTHO05D002467 8.2e-06 56.2 69 40.6
COL.COLO4_15642 Corchorus olitorius HOM05D001406 ORTHO05D002467 8.2e-06 56.2 71 40.8
Os01g0556400 Oryza sativa ssp. japonica HOM05D001406 ORTHO05D002467 8.2e-06 56.2 63 41.3


User provided reference genes

Program Settings