Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32433 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 3.0e-61 238.4 130 100.0
SEGI_32370 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 4.1e-50 201.4 126 88.9
SEGI_09109 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 8.3e-43 177.2 120 83.3
SEGI_37007 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 9.9e-20 100.5 95 63.2
HPP92_008910 Vanilla planifolia HOM05D003381 ORTHO05D003880 8.4e-11 70.9 119 37.8
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 2.4e-10 69.3 91 47.3
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 4.2e-10 68.6 86 48.8
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 4.2e-10 68.6 86 48.8
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 1.6e-09 66.6 86 46.5
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.6e-09 66.6 95 46.3
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 2.1e-09 66.2 80 50.0
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 3.5e-09 65.5 83 49.4
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 3.5e-09 65.5 79 48.1
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 4.6e-09 65.1 95 45.3
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 6.0e-09 64.7 91 45.1
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 6.0e-09 64.7 97 43.3
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 7.8e-09 64.3 94 44.7
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 7.8e-09 64.3 116 42.2
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 7.8e-09 64.3 79 48.1
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 1.0e-08 63.9 79 48.1
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.0e-08 63.9 81 49.4
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.0e-08 63.9 81 49.4
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 1.0e-08 63.9 81 49.4
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 1.3e-08 63.5 84 45.2
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 1.3e-08 63.5 79 46.8
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.7e-08 63.2 95 42.1
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 2.3e-08 62.8 93 40.9
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.3e-08 62.8 81 48.1
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 2.3e-08 62.8 108 38.0
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 2.3e-08 62.8 83 45.8
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 3.0e-08 62.4 130 39.2
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 3.9e-08 62.0 85 42.4
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 3.9e-08 62.0 110 37.3
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 3.9e-08 62.0 85 42.4
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 3.9e-08 62.0 88 46.6
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.1e-08 61.6 84 46.4
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.1e-08 61.6 84 46.4
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 5.1e-08 61.6 97 43.3
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 5.1e-08 61.6 88 44.3
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 6.6e-08 61.2 95 44.2
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 8.7e-08 60.8 83 47.0
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 8.7e-08 60.8 81 46.9
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 8.7e-08 60.8 80 47.5
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 1.1e-07 60.5 102 40.2
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.5e-07 60.1 84 45.2
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 1.5e-07 60.1 105 39.0
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 1.9e-07 59.7 84 42.9
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 1.9e-07 59.7 84 42.9
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 1.9e-07 59.7 79 45.6
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.9e-07 59.7 100 41.0
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.5e-07 59.3 80 46.2
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 2.5e-07 59.3 102 39.2
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 2.5e-07 59.3 97 42.3
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 3.3e-07 58.9 83 42.2
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 3.3e-07 58.9 89 41.6
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 4.3e-07 58.5 84 44.0
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 4.3e-07 58.5 84 44.0
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 4.3e-07 58.5 88 43.2
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 5.6e-07 58.2 87 42.5
Carub.0006s2251 Capsella rubella HOM05D003381 ORTHO05D003880 5.6e-07 58.2 86 40.7
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 5.6e-07 58.2 78 46.2
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 5.6e-07 58.2 81 46.9
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.6e-07 58.2 84 45.2
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 5.6e-07 58.2 79 44.3
Zm00001eb043810 Zea mays HOM05D003381 ORTHO05D003880 5.6e-07 58.2 86 41.9
Zm00001eb220550 Zea mays HOM05D003381 ORTHO05D003880 5.6e-07 58.2 84 42.9
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 7.3e-07 57.8 87 44.8
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 7.3e-07 57.8 83 44.6
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 9.6e-07 57.4 94 42.6
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 9.6e-07 57.4 77 44.2
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 9.6e-07 57.4 81 44.4
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.3e-06 57.0 88 39.8
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 1.3e-06 57.0 102 40.2
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 1.3e-06 57.0 81 42.0
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.3e-06 57.0 83 43.4
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 1.6e-06 56.6 105 36.2
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 1.6e-06 56.6 83 44.6
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 2.1e-06 56.2 104 36.5
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 2.1e-06 56.2 83 42.2
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 2.1e-06 56.2 75 40.0
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 2.1e-06 56.2 74 45.9
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.8e-06 55.8 83 42.2
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 2.8e-06 55.8 79 40.5
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 2.8e-06 55.8 79 44.3
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 2.8e-06 55.8 83 44.6
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.8e-06 55.8 83 42.2
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 2.8e-06 55.8 81 44.4
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 3.6e-06 55.5 84 41.7
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 3.6e-06 55.5 72 41.7
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 3.6e-06 55.5 99 39.4
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 3.6e-06 55.5 79 44.3
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 3.6e-06 55.5 83 42.2
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 4.8e-06 55.1 83 42.2
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 4.8e-06 55.1 83 42.2
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 4.8e-06 55.1 83 42.2
Os10g0509600 Oryza sativa ssp. japonica HOM05D003381 ORTHO05D003880 4.8e-06 55.1 88 39.8
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 4.8e-06 55.1 55 56.4
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 4.8e-06 55.1 80 45.0
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 4.8e-06 55.1 81 43.2
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 6.2e-06 54.7 81 43.2
A06p18160 Brassica napus HOM05D003381 ORTHO05D003880 6.2e-06 54.7 94 41.5
CDE09G1369 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 6.2e-06 54.7 81 39.5
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 6.2e-06 54.7 80 42.5
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 6.2e-06 54.7 83 44.6
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 8.1e-06 54.3 83 43.4
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 8.1e-06 54.3 81 39.5


User provided reference genes

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