Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32416 Sequoiadendron giganteum HOM05D000104 ORTHO05D019205 5.6e-214 747.3 364 100.0
TAR362G0360 Trochodendron aralioides HOM05D000104 ORTHO05D006397 9.5e-20 102.1 271 32.1
ATR0787G043 Amborella trichopoda HOM05D000104 ORTHO05D006397 1.5e-17 94.7 154 38.3
PSO764G0152 Papaver somniferum HOM05D000104 ORTHO05D006397 2.0e-17 94.4 147 40.1
SMO115G0122 Selaginella moellendorffii HOM05D000104 ORTHO05D006397 2.6e-17 94.0 186 33.9
Aqoxy5G00143 Aquilegia oxysepala HOM05D000104 ORTHO05D006397 4.4e-17 93.2 267 30.0
Nn1g02977 Nelumbo nucifera HOM05D000104 ORTHO05D006397 4.4e-17 93.2 287 30.0
FAN05G1722 Fragaria x ananassa HOM05D000104 ORTHO05D006397 5.8e-17 92.8 146 37.0
FAN05G2560 Fragaria x ananassa HOM05D000104 ORTHO05D006397 5.8e-17 92.8 146 37.0
FAN09G4154 Fragaria x ananassa HOM05D000104 ORTHO05D006397 1.7e-16 91.3 153 34.6
Pp3c14_22150 Physcomitrium patens HOM05D000104 ORTHO05D006397 2.9e-16 90.5 194 33.0
FAN14G4089 Fragaria x ananassa HOM05D000104 ORTHO05D006397 4.9e-16 89.7 153 34.6
FAN14G5045 Fragaria x ananassa HOM05D000104 ORTHO05D006397 4.9e-16 89.7 153 34.6
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 6.4e-16 89.4 53 75.5
FvH4_6g01581 Fragaria vesca HOM05D000104 ORTHO05D006397 8.3e-16 89.0 146 35.6
Potri.013G048500 Populus trichocarpa HOM05D000104 ORTHO05D006397 1.9e-15 87.8 206 32.0
Manes.09G147000 Manihot esculenta HOM05D000104 ORTHO05D006397 4.1e-15 86.7 177 32.8
Sabra13G0044700 Salix brachista HOM05D000104 ORTHO05D006397 4.1e-15 86.7 179 31.3
Sc09g0001860 Simmondsia chinensis HOM05D000104 ORTHO05D006397 7.1e-15 85.9 157 32.5
Atru.chr2.1068 Acer truncatum HOM05D000104 ORTHO05D006397 1.6e-14 84.7 281 27.4
Thecc.05G267600 Theobroma cacao HOM05D000104 ORTHO05D006397 1.6e-14 84.7 269 33.1
RcHm_v2.0_Chr3g0449401 Rosa chinensis HOM05D000104 ORTHO05D006397 2.1e-14 84.3 191 31.9
CANSAT54G2768 Cannabis sativa HOM05D000104 ORTHO05D006397 4.6e-14 83.2 149 33.6
AagrBONN_evm.TU.Sc2ySwM_344.2543 Anthoceros agrestis HOM05D000104 ORTHO05D006397 6.0e-14 82.8 174 29.9
Sabra19G0033000 Salix brachista HOM05D000104 ORTHO05D006397 6.0e-14 82.8 253 29.2
Mapoly0058s0081 Marchantia polymorpha HOM05D000104 ORTHO05D006397 1.0e-13 82.0 159 33.3
CSS0004215 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006397 2.3e-13 80.9 242 30.2
FAN02G0967 Fragaria x ananassa HOM05D000104 ORTHO05D006397 2.3e-13 80.9 273 26.7
MD04G1232200 Malus domestica HOM05D000104 ORTHO05D006397 8.6e-13 79.0 189 32.8
Actinidia34760 Actinidia chinensis HOM05D000104 ORTHO05D006397 1.1e-12 78.6 266 29.3
Prupe.6G351600 Prunus persica HOM05D000104 ORTHO05D006397 1.5e-12 78.2 267 27.3
CiPaw.08G118700 Carya illinoinensis HOM05D000104 ORTHO05D006397 1.9e-12 77.8 264 29.2
Potri.019G021500 Populus trichocarpa HOM05D000104 ORTHO05D006397 1.9e-12 77.8 276 27.9
MD00G1149200 Malus domestica HOM05D000104 ORTHO05D006397 3.3e-12 77.0 201 29.4
EL10Ac4g09754 Beta vulgaris HOM05D000104 ORTHO05D006397 7.3e-12 75.9 147 30.6
ECA238G2794 Erigeron canadensis HOM05D000104 ORTHO05D006397 9.5e-12 75.5 205 28.8
GSVIVG01023393001 Vitis vinifera HOM05D000104 ORTHO05D006397 1.6e-11 74.7 265 30.6
COL.COLO4_15520 Corchorus olitorius HOM05D000104 ORTHO05D006397 4.7e-11 73.2 260 27.3
Duzib128G0174 Durio zibethinus HOM05D000104 ORTHO05D006397 4.7e-11 73.2 266 29.7
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 8.1e-11 72.4 44 75.0
TWI60G0140 Tripterygium wilfordii HOM05D000104 ORTHO05D006397 1.8e-10 71.2 147 30.6
Zm00001eb046650 Zea mays HOM05D000104 ORTHO05D006397 4.0e-10 70.1 173 30.1
Eucgr.H04218 Eucalyptus grandis HOM05D000104 ORTHO05D006397 6.8e-10 69.3 266 26.7
Os10g0457700 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D006397 1.5e-09 68.2 168 30.4
Lsat_1_v5_gn_2_15881 Lactuca sativa HOM05D000104 ORTHO05D006397 5.8e-09 66.2 219 26.0
Nitab4.5_0002088g0030 Nicotiana tabacum HOM05D000104 ORTHO05D006397 7.6e-09 65.9 218 27.5
Ciclev10030509m.g Citrus clementina HOM05D000104 ORTHO05D006397 9.9e-09 65.5 134 34.3
Pp3c9_9190 Physcomitrium patens HOM05D000104 ORTHO05D019205 9.9e-09 65.5 69 47.8
QL03p029602 Quercus lobata HOM05D000104 ORTHO05D006397 9.9e-09 65.5 285 25.6
Nitab4.5_0000061g0050 Nicotiana tabacum HOM05D000104 ORTHO05D006397 1.3e-08 65.1 154 29.2
Gohir.A11G245400 Gossypium hirsutum HOM05D000104 ORTHO05D006397 1.7e-08 64.7 268 28.0
Phvul.L001951 Phaseolus vulgaris HOM05D000104 ORTHO05D006397 2.9e-08 63.9 216 30.1
Gohir.D11G255300 Gossypium hirsutum HOM05D000104 ORTHO05D006397 6.4e-08 62.8 282 27.7
Gorai.007G273900 Gossypium raimondii HOM05D000104 ORTHO05D006397 6.4e-08 62.8 282 27.7
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 6.4e-08 62.8 61 57.4
THA.LOC104805785 Tarenaya hassleriana HOM05D000104 ORTHO05D006397 6.4e-08 62.8 69 42.0
Glyma.20G227200 Glycine max HOM05D000104 ORTHO05D006397 8.4e-08 62.4 143 31.5
Haze_04401 Corylus avellana HOM05D000104 ORTHO05D006397 1.1e-07 62.0 216 25.0
Hma1.2p1_1336F.1_g276420 Hydrangea macrophylla HOM05D000104 ORTHO05D006397 1.4e-07 61.6 65 41.5
FAN02G1679 Fragaria x ananassa HOM05D000104 ORTHO05D019205 3.2e-07 60.5 124 30.6
HanXRQChr11g0327241 Helianthus annuus HOM05D000104 ORTHO05D006397 3.2e-07 60.5 211 27.0
Lalb_Chr06g0168221 Lupinus albus HOM05D000104 ORTHO05D006397 3.2e-07 60.5 289 27.0
DCAR_028378 Daucus carota HOM05D000104 ORTHO05D006397 4.1e-07 60.1 216 25.0
SEGI_23190 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 3.5e-06 57.0 46 58.7


User provided reference genes

Program Settings