Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32410 Sequoiadendron giganteum HOM05D000290 ORTHO05D006586 6.6e-108 394.0 199 100.0
Lj6g0018970 Lotus japonicus HOM05D000290 ORTHO05D006586 1.7e-42 176.8 151 63.6
Ca_11838_v3 Cicer arietinum L. HOM05D000290 ORTHO05D006586 6.3e-42 174.9 153 63.4
CDE04G0255 Ceratophyllum demersum HOM05D000290 ORTHO05D006586 8.2e-42 174.5 160 58.8
ATR0787G059 Amborella trichopoda HOM05D000290 ORTHO05D006586 1.8e-41 173.3 153 62.1
Psat6g047200 Pisum sativum HOM05D000290 ORTHO05D006586 1.8e-41 173.3 149 62.4
Solyc09g091580.3 Solanum lycopersicum HOM05D000290 ORTHO05D006586 5.3e-41 171.8 170 58.8
Medtr1g046620 Medicago truncatula HOM05D000290 ORTHO05D006586 1.2e-40 170.6 153 60.1
Sopen09g034500 Solanum pennellii HOM05D000290 ORTHO05D006586 1.2e-40 170.6 170 58.2
PGSC0003DMG400029652 Solanum tuberosum HOM05D000290 ORTHO05D006586 4.5e-40 168.7 175 57.7
Lalb_Chr19g0128901 Lupinus albus HOM05D000290 ORTHO05D006586 5.9e-40 168.3 144 64.6
Sed0005259 Sechium edule HOM05D000290 ORTHO05D006586 1.3e-39 167.2 153 58.2
Nitab4.5_0000306g0050 Nicotiana tabacum HOM05D000290 ORTHO05D006586 3.8e-39 165.6 167 56.3
Rhsim02G0054000 Rhododendron simsii HOM05D000290 ORTHO05D006586 3.8e-39 165.6 151 60.3
SalBow2G3111 Salvia bowleyana HOM05D000290 ORTHO05D006586 5.0e-39 165.2 154 62.3
Sed0012783 Sechium edule HOM05D000290 ORTHO05D006586 5.0e-39 165.2 147 58.5
Nitab4.5_0004881g0010 Nicotiana tabacum HOM05D000290 ORTHO05D006586 8.5e-39 164.5 174 55.2
GSVIVG01000514001 Vitis vinifera HOM05D000290 ORTHO05D006586 1.1e-38 164.1 148 60.8
TPR.G11291 Trifolium pratense HOM05D000290 ORTHO05D006586 1.9e-38 163.3 153 59.5
MBI07_g21067_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D006586 3.2e-38 162.5 166 57.2
unitig_32.g11072 Utricularia gibba HOM05D000290 ORTHO05D006586 4.2e-38 162.2 143 60.1
SGA_v2.0_scaffold57G20146 Striga asiatica HOM05D000290 ORTHO05D006586 5.5e-38 161.8 167 57.5
Migut.G00636 Erythranthe guttata HOM05D000290 ORTHO05D006586 7.2e-38 161.4 153 60.1
Pp3c21_5070 Physcomitrium patens HOM05D000290 ORTHO05D006586 7.2e-38 161.4 148 58.8
QL06p023596 Quercus lobata HOM05D000290 ORTHO05D006586 7.2e-38 161.4 149 59.7
CsaV3_2G011390 Cucumis sativus L. HOM05D000290 ORTHO05D006586 9.4e-38 161.0 162 55.6
Hma1.2p1_0691F.1_g204170 Hydrangea macrophylla HOM05D000290 ORTHO05D006586 9.4e-38 161.0 158 57.6
MD04G1002700 Malus domestica HOM05D000290 ORTHO05D006586 9.4e-38 161.0 117 69.2
Glyma.10G124200 Glycine max HOM05D000290 ORTHO05D006586 1.2e-37 160.6 150 58.7
MELO3C020465.2 Cucumis melo HOM05D000290 ORTHO05D006586 1.6e-37 160.2 162 55.6
TAR636G2778 Trochodendron aralioides HOM05D000290 ORTHO05D006586 1.6e-37 160.2 180 51.7
Mapoly0134s0032 Marchantia polymorpha HOM05D000290 ORTHO05D006586 2.7e-37 159.5 158 57.6
Phvul.007G236200 Phaseolus vulgaris HOM05D000290 ORTHO05D006586 2.7e-37 159.5 167 56.9
Lj6C615T15 Lonicera japonica HOM05D000290 ORTHO05D006586 3.6e-37 159.1 158 58.9
Prupe.1G002700 Prunus persica HOM05D000290 ORTHO05D006586 3.6e-37 159.1 146 59.6
VMungo0720G1237 Vigna mungo HOM05D000290 ORTHO05D006586 3.6e-37 159.1 147 60.5
Glyma.20G076300 Glycine max HOM05D000290 ORTHO05D006586 6.1e-37 158.3 146 59.6
arahy.Tifrunner.gnm1.ann1.56TENK Arachis hypogaea HOM05D000290 ORTHO05D006586 8.0e-37 157.9 108 73.1
ECA238G3224 Erigeron canadensis HOM05D000290 ORTHO05D006586 1.0e-36 157.5 173 56.1
Nn1g07780 Nelumbo nucifera HOM05D000290 ORTHO05D006586 1.0e-36 157.5 144 59.0
MSTRG.9828 Avicennia marina HOM05D000290 ORTHO05D006586 1.4e-36 157.1 153 60.8
ClCG06G007660 Citrullus lanatus HOM05D000290 ORTHO05D006586 1.4e-36 157.1 165 54.5
PSO017G2183 Papaver somniferum HOM05D000290 ORTHO05D006586 1.4e-36 157.1 116 67.2
PSO063G6763 Papaver somniferum HOM05D000290 ORTHO05D006586 1.4e-36 157.1 116 67.2
AagrBONN_evm.TU.Sc2ySwM_228.766 Anthoceros agrestis HOM05D000290 ORTHO05D006586 1.8e-36 156.8 151 55.0
AT3G24190 Arabidopsis thaliana HOM05D000290 ORTHO05D006586 2.3e-36 156.4 158 53.8
AUR62020268 Chenopodium quinoa HOM05D000290 ORTHO05D006586 2.3e-36 156.4 148 61.5
Cc03_g07380 Coffea canephora HOM05D000290 ORTHO05D006586 3.0e-36 156.0 162 55.6
BcaB06g26567 Brassica carinata HOM05D000290 ORTHO05D006586 5.2e-36 155.2 147 58.5
AUR62037733 Chenopodium quinoa HOM05D000290 ORTHO05D006586 5.2e-36 155.2 148 62.2
Haze_11579 Corylus avellana HOM05D000290 ORTHO05D006586 6.8e-36 154.8 175 51.4
Cpa.g.sc59.106 Carica papaya HOM05D000290 ORTHO05D006586 8.8e-36 154.5 170 52.9
Cfa014889 Carpinus fangiana HOM05D000290 ORTHO05D006586 8.8e-36 154.5 171 52.6
COL.COLO4_20299 Corchorus olitorius HOM05D000290 ORTHO05D006586 1.5e-35 153.7 155 59.4
Lsat_1_v5_gn_2_43101 Lactuca sativa HOM05D000290 ORTHO05D006586 1.5e-35 153.7 150 57.3
Thhalv10002400m.g Eutrema salsugineum HOM05D000290 ORTHO05D006586 2.6e-35 152.9 156 55.8
PGR083G1777 Punica granatum HOM05D000290 ORTHO05D006586 2.6e-35 152.9 169 55.0
HPP92_014820 Vanilla planifolia HOM05D000290 ORTHO05D006586 2.6e-35 152.9 148 56.1
Zm00001eb191420 Zea mays HOM05D000290 ORTHO05D006586 2.6e-35 152.9 147 56.5
AL3G39050 Arabidopsis lyrata HOM05D000290 ORTHO05D006586 3.4e-35 152.5 159 54.1
arahy.Tifrunner.gnm1.ann1.8YLR9D Arachis hypogaea HOM05D000290 ORTHO05D006586 3.4e-35 152.5 108 72.2
arahy.Tifrunner.gnm1.ann1.GXU0CK Arachis hypogaea HOM05D000290 ORTHO05D006586 3.4e-35 152.5 108 72.2
CiPaw.01G125100 Carya illinoinensis HOM05D000290 ORTHO05D006586 7.5e-35 151.4 151 57.0
Aa31LG8G10600 Aethionema arabicum HOM05D000290 ORTHO05D006586 9.8e-35 151.0 164 53.7
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 9.8e-35 151.0 155 55.5
Ciclev10004351m.g Citrus clementina HOM05D000290 ORTHO05D006586 1.3e-34 150.6 181 49.7
A07p08360 Brassica napus HOM05D000290 ORTHO05D006586 1.7e-34 150.2 150 56.0
DCAR_002265 Daucus carota HOM05D000290 ORTHO05D006586 2.2e-34 149.8 164 54.9
Ah.12g061360 Amaranthus hybridus HOM05D000290 ORTHO05D006586 4.8e-34 148.7 119 66.4
Manes.15G051150 Manihot esculenta HOM05D000290 ORTHO05D006586 4.8e-34 148.7 178 48.3
BcaC06g35603 Brassica carinata HOM05D000290 ORTHO05D006586 8.3e-34 147.9 150 55.3
C07p13060 Brassica napus HOM05D000290 ORTHO05D006586 8.3e-34 147.9 150 55.3
BolC7t41800H Brassica oleracea HOM05D000290 ORTHO05D006586 8.3e-34 147.9 150 55.3
HanXRQChr10g0278381 Helianthus annuus HOM05D000290 ORTHO05D006586 8.3e-34 147.9 154 56.5
Sc13g0000030 Simmondsia chinensis HOM05D000290 ORTHO05D006586 8.3e-34 147.9 126 65.1
Sc22g0000030 Simmondsia chinensis HOM05D000290 ORTHO05D006586 8.3e-34 147.9 126 65.1
CANSAT78G1105 Cannabis sativa HOM05D000290 ORTHO05D006586 1.4e-33 147.1 161 55.9
BolC1t03919H Brassica oleracea HOM05D000290 ORTHO05D006586 1.8e-33 146.7 167 52.7
CANSAT78G1998 Cannabis sativa HOM05D000290 ORTHO05D006586 1.8e-33 146.7 142 59.2
Carub.0003s2431 Capsella rubella HOM05D000290 ORTHO05D006586 1.8e-33 146.7 170 50.6
SMO367G0905 Selaginella moellendorffii HOM05D000290 ORTHO05D006586 1.8e-33 146.7 105 69.5
Potri.001G050700 Populus trichocarpa HOM05D000290 ORTHO05D006586 2.4e-33 146.4 109 67.0
Duzib212G0906 Durio zibethinus HOM05D000290 ORTHO05D006586 3.1e-33 146.0 155 54.2
Eucgr.H02832 Eucalyptus grandis HOM05D000290 ORTHO05D006586 4.1e-33 145.6 126 60.3
Gohir.A09G202900 Gossypium hirsutum HOM05D000290 ORTHO05D006586 4.1e-33 145.6 160 53.1
FAN17G1118 Fragaria x ananassa HOM05D000290 ORTHO05D006586 7.0e-33 144.8 145 57.2
FAN22G0606 Fragaria x ananassa HOM05D000290 ORTHO05D006586 7.0e-33 144.8 145 57.2
Thecc.04G209700 Theobroma cacao HOM05D000290 ORTHO05D006586 7.0e-33 144.8 159 54.1
BraA01t03238Z Brassica rapa HOM05D000290 ORTHO05D006586 9.1e-33 144.4 179 50.8
BraA07t28622Z Brassica rapa HOM05D000290 ORTHO05D006586 9.1e-33 144.4 110 66.4
RcHm_v2.0_Chr4g0385111 Rosa chinensis HOM05D000290 ORTHO05D006586 9.1e-33 144.4 178 48.3
Gohir.D09G197066 Gossypium hirsutum HOM05D000290 ORTHO05D006586 1.2e-32 144.1 111 66.7
Gorai.006G220400 Gossypium raimondii HOM05D000290 ORTHO05D006586 1.2e-32 144.1 111 66.7
A01p31140 Brassica napus HOM05D000290 ORTHO05D006586 1.6e-32 143.7 175 52.0
FvH4_4g00270 Fragaria vesca HOM05D000290 ORTHO05D006586 2.0e-32 143.3 144 57.6
FAN12G2035 Fragaria x ananassa HOM05D000290 ORTHO05D006586 2.0e-32 143.3 144 57.6
vmacro15510 Vaccinium macrocarpon HOM05D000290 ORTHO05D006586 2.0e-32 143.3 206 44.2
C01p39670 Brassica napus HOM05D000290 ORTHO05D006586 2.7e-32 142.9 108 68.5
Atru.chr4.1760 Acer truncatum HOM05D000290 ORTHO05D006586 4.5e-32 142.1 108 66.7
Aqoxy2G03772 Aquilegia oxysepala HOM05D000290 ORTHO05D006586 5.9e-32 141.7 154 51.9
SpUn0242_0010 Schrenkiella parvula HOM05D000290 ORTHO05D006586 5.9e-32 141.7 165 49.7
CAN.G500.68 Capsicum annuum HOM05D000290 ORTHO05D006586 7.7e-32 141.4 106 67.0
Gohir.D09G197000 Gossypium hirsutum HOM05D000290 ORTHO05D006586 1.0e-31 141.0 108 66.7
THA.LOC104808723 Tarenaya hassleriana HOM05D000290 ORTHO05D006586 6.5e-31 138.3 169 50.9
Dinv29565 Davidia involucrata HOM05D000290 ORTHO05D006586 2.1e-29 133.3 148 55.4
CBR_g19084 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-25 119.0 186 41.9
EL10Ac7g17006 Beta vulgaris HOM05D000290 ORTHO05D006586 9.2e-25 117.9 137 49.6
MCO05G742 Micromonas commoda HOM05D000290 ORTHO05D006586 4.3e-22 109.0 109 50.5
Sabra10G0064600 Salix brachista HOM05D000225 ORTHO05D003554 1.0e-20 104.4 88 60.2
PRCOL_00001464 Prasinoderma coloniale HOM05D000290 ORTHO05D006586 1.5e-19 100.5 106 49.1
Cre04.g215400 Chlamydomonas reinhardtii HOM05D000290 ORTHO05D006586 1.3e-18 97.4 105 46.7
Actinidia39957 Actinidia chinensis HOM05D000290 ORTHO05D006586 2.2e-18 96.7 155 43.9
Actinidia11397 Actinidia chinensis HOM05D000290 ORTHO05D006586 2.3e-15 86.7 152 40.8
Peaxi162Scf00047g00103 Petunia axillaris HOM05D000290 ORTHO05D006586 1.9e-14 83.6 58 67.2


User provided reference genes

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