Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 8.2e-137 490.3 240 100.0
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.4e-48 197.2 198 48.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 7.1e-48 194.9 171 54.4
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.7e-47 193.0 179 52.0
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 6.0e-47 191.8 179 51.4
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.3e-46 190.7 188 50.5
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 8.7e-46 188.0 192 48.4
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 3.3e-45 186.0 186 50.0
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 3.3e-45 186.0 178 52.2
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 5.6e-45 185.3 180 50.6
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 7.4e-45 184.9 178 51.7
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 7.4e-45 184.9 178 50.0
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.1e-44 181.4 187 46.5
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 8.1e-44 181.4 187 46.5
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.1e-43 181.0 182 50.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 1.4e-43 180.6 178 50.0
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.8e-43 180.3 180 51.1
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.8e-43 180.3 177 50.3
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.8e-43 180.3 162 52.5
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.4e-43 179.9 182 49.5
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.4e-43 179.9 187 46.5
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.1e-43 179.5 187 45.5
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 3.1e-43 179.5 180 49.4
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 3.1e-43 179.5 161 55.3
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 4.0e-43 179.1 147 54.4
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 5.3e-43 178.7 187 46.0
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.3e-43 178.7 187 46.5
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 5.3e-43 178.7 182 51.6
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 6.9e-43 178.3 180 47.8
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 6.9e-43 178.3 182 48.4
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 9.0e-43 177.9 180 50.0
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 9.0e-43 177.9 180 50.0
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 9.0e-43 177.9 187 46.5
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 9.0e-43 177.9 174 52.3
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.5e-42 177.2 176 49.4
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 2.0e-42 176.8 170 50.0
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 2.6e-42 176.4 172 52.9
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.4e-42 176.0 180 48.3
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 3.4e-42 176.0 172 52.9
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 7.6e-42 174.9 171 50.9
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.6e-42 174.9 160 52.5
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 1.3e-41 174.1 178 48.9
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.7e-41 173.7 164 53.0
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 1.7e-41 173.7 143 58.0
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 2.2e-41 173.3 175 48.0
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 2.9e-41 172.9 178 47.8
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 3.8e-41 172.6 166 52.4
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 3.8e-41 172.6 195 45.6
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 6.4e-41 171.8 182 47.8
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 6.4e-41 171.8 181 48.1
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 8.4e-41 171.4 170 51.2
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 8.4e-41 171.4 170 51.2
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 1.1e-40 171.0 178 48.3
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.4e-40 170.6 190 48.9
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 3.2e-40 169.5 195 44.6
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 4.2e-40 169.1 178 48.9
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 5.5e-40 168.7 187 43.9
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 9.3e-40 167.9 182 48.9
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 2.1e-39 166.8 172 48.3
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 2.7e-39 166.4 197 45.2
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 2.7e-39 166.4 174 47.7
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 3.5e-39 166.0 170 49.4
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 4.6e-39 165.6 173 48.0
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 4.6e-39 165.6 166 47.0
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 6.0e-39 165.2 196 42.9
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 7.9e-39 164.9 176 48.9
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 1.8e-38 163.7 172 47.7
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 2.3e-38 163.3 169 49.7
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 3.9e-38 162.5 150 54.0
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.9e-38 162.5 178 46.6
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 5.1e-38 162.2 171 48.5
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 6.7e-38 161.8 176 46.6
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 8.7e-38 161.4 189 42.9
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 1.5e-37 160.6 202 41.1
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 2.5e-37 159.8 173 46.8
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 3.3e-37 159.5 186 45.2
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 4.3e-37 159.1 170 46.5
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 4.3e-37 159.1 178 47.2
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 4.3e-37 159.1 215 40.5
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 1.3e-36 157.5 181 45.9
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 2.1e-36 156.8 161 50.3
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 2.1e-36 156.8 161 50.3
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 2.1e-36 156.8 128 59.4
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.7e-36 156.0 173 48.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 8.2e-36 154.8 131 55.7
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.1e-35 154.5 128 59.4
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 2.4e-35 153.3 192 39.6
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 4.0e-35 152.5 235 35.7
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 5.3e-35 152.1 138 53.6
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 1.2e-34 151.0 175 44.0
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 1.5e-34 150.6 144 52.8
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 1.5e-34 150.6 175 49.1
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 7.6e-34 148.3 183 43.2
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.0e-33 147.9 174 43.7
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 1.0e-33 147.9 190 37.4
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.3e-33 147.5 171 43.9
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.7e-33 147.1 187 41.2
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 1.7e-33 147.1 145 51.7
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 2.2e-33 146.7 148 47.3
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 2.9e-33 146.4 174 44.3
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 3.8e-33 146.0 175 43.4
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 4.9e-33 145.6 168 45.8
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 1.1e-32 144.4 183 40.4
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 1.4e-32 144.1 174 42.5
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 9.3e-32 141.4 186 40.9
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 9.3e-32 141.4 186 40.9
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 9.3e-32 141.4 128 54.7
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 2.1e-31 140.2 172 43.0
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 4.6e-31 139.0 196 40.3
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.8e-30 137.1 187 40.6
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.8e-30 137.1 187 40.6
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 4.8e-28 129.0 207 38.6
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 1.4e-27 127.5 147 45.6
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.4e-24 117.5 199 36.7
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 2.3e-22 110.2 138 44.2
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 3.3e-21 106.3 90 54.4
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 7.4e-21 105.1 139 41.0
SMO169G0249 Selaginella moellendorffii HOM05D005964 ORTHO05D007242 1.1e-19 101.3 204 32.8
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 9.1e-19 98.2 89 49.4
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 9.1e-19 98.2 176 33.0
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.2e-18 97.8 87 54.0
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 5.9e-18 95.5 81 55.6
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 3.2e-16 89.7 77 59.7
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.6e-15 87.4 132 34.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 1.1e-08 64.7 44 63.6
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 5.5e-08 62.4 143 31.5


User provided reference genes

Program Settings