Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 0.0e+00 1338.6 681 100.0
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-191 674.1 621 59.6
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 2.0e-95 354.4 580 39.5
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.2e-94 350.9 602 40.2
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.2e-92 345.1 585 39.3
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 4.6e-92 343.2 577 39.2
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 6.0e-92 342.8 575 39.0
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.7e-91 341.3 559 39.9
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.1e-91 339.7 586 38.1
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 5.1e-91 339.7 559 39.5
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 8.6e-91 339.0 565 38.9
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.5e-90 338.2 561 39.4
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.5e-90 337.4 565 38.8
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 7.3e-90 335.9 556 38.7
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.6e-89 334.7 558 39.1
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.1e-89 334.3 564 38.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.1e-88 330.5 564 41.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 4.0e-88 330.1 564 38.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.0e-87 327.8 554 38.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 5.8e-87 326.2 559 39.0
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.3e-86 325.1 552 39.5
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.7e-86 324.7 560 38.6
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.7e-86 324.7 558 39.1
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.7e-86 324.7 551 38.7
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 2.2e-86 324.3 591 37.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.2e-86 324.3 554 38.4
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 2.9e-86 323.9 564 39.5
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.9e-85 321.2 564 37.6
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.4e-85 320.9 559 39.5
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.2e-85 320.1 564 37.8
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.4e-85 319.7 563 40.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 9.3e-85 318.9 560 38.6
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.1e-84 317.8 551 39.4
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.1e-84 317.8 558 37.5
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.7e-84 317.4 555 37.1
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.6e-84 316.6 564 37.4
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 4.6e-84 316.6 560 38.0
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.3e-83 315.1 552 39.7
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.7e-83 314.7 569 38.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 1.7e-83 314.7 560 38.8
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 3.9e-83 313.5 559 37.6
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 3.9e-83 313.5 564 39.0
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 6.6e-83 312.8 565 37.5
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 8.7e-83 312.4 553 38.9
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.5e-82 311.6 552 37.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.3e-82 310.1 607 35.1
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 5.6e-82 309.7 602 37.0
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 7.3e-82 309.3 568 39.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.3e-81 308.5 562 38.8
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 2.1e-81 307.8 555 38.2
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.2e-81 306.2 537 40.0
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.4e-80 305.1 537 39.3
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 2.4e-80 304.3 572 35.5
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 3.1e-80 303.9 567 36.5
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.9e-80 302.8 546 35.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 9.0e-80 302.4 552 37.3
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.0e-79 301.2 510 40.2
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.0e-79 301.2 539 38.0
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 2.0e-79 301.2 540 38.1
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 3.4e-79 300.4 567 36.3
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.3e-78 298.5 546 38.5
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.2e-78 297.7 566 38.9
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 4.9e-78 296.6 552 37.9
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 2.4e-77 294.3 557 36.1
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.4e-77 294.3 567 37.9
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.4e-77 294.3 566 37.6
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.2e-77 293.5 555 35.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.7e-76 290.8 569 37.8
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 2.5e-74 284.3 562 35.6
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 5.6e-74 283.1 570 34.7
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.4e-74 282.7 562 35.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 9.6e-74 282.3 593 35.8
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 3.7e-73 280.4 546 36.3
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 2.4e-72 277.7 520 36.9
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.7e-70 271.6 579 33.9
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.2e-70 271.2 535 36.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.9e-70 270.8 558 36.2
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.9e-70 270.8 558 36.2
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.6e-68 265.0 577 34.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.9e-66 258.1 557 33.0
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 7.6e-63 246.1 604 32.0
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.2e-61 240.7 561 34.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.6e-60 238.4 562 32.6
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 2.7e-60 237.7 603 32.3
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 5.1e-59 233.4 624 32.9
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.1e-58 232.3 570 33.7
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 2.1e-57 228.0 477 36.3
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 3.4e-55 220.7 534 32.6
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 7.6e-55 219.5 470 34.7
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.4e-53 215.3 559 31.7
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.4e-53 215.3 532 32.3
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 2.1e-52 211.5 503 33.8
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 5.9e-47 193.4 607 30.1
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 3.8e-46 190.7 544 31.2
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 4.2e-45 187.2 539 29.1
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 4.6e-44 183.7 341 38.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 6.1e-44 183.3 311 40.5
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 7.9e-44 183.0 542 29.2
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 6.3e-41 173.3 463 32.0
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 4.1e-40 170.6 549 29.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 8.5e-38 162.9 192 47.9
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 4.2e-37 160.6 403 34.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.1e-36 158.3 176 47.2
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.8e-35 152.9 509 28.7
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.8e-33 147.9 194 44.8
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.8e-33 147.9 150 52.0
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.7e-33 147.5 492 28.7
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.4e-32 145.6 178 46.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.4e-32 145.6 357 33.3
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 4.0e-27 127.5 289 31.8
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 1.5e-26 125.6 141 51.8
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 6.5e-22 110.2 134 45.5
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.0e-20 103.2 79 62.0
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 8.9e-11 73.2 54 63.0
SEGI_16226 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 2.7e-07 61.6 53 67.9
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.3e-06 58.5 52 57.7


User provided reference genes

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