Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 2.2e-82 308.9 158 100.0
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 1.3e-10 70.5 115 41.7
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 3.0e-10 69.3 51 60.8
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 3.9e-10 68.9 52 57.7
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 5.1e-10 68.6 51 56.9
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 1.1e-09 67.4 51 60.8
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 1.9e-09 66.6 114 40.4
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 2.5e-09 66.2 50 58.0
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 2.5e-09 66.2 50 60.0
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 2.5e-09 66.2 51 58.8
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 3.3e-09 65.9 51 56.9
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 5.6e-09 65.1 51 56.9
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 5.6e-09 65.1 108 38.9
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 5.6e-09 65.1 50 60.0
SEGI_05802 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 7.3e-09 64.7 83 47.0
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 1.2e-08 63.9 61 55.7
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 1.2e-08 63.9 50 60.0
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 1.2e-08 63.9 50 58.0
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 1.6e-08 63.5 52 57.7
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 1.6e-08 63.5 50 60.0
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 2.1e-08 63.2 50 52.0
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 2.1e-08 63.2 51 54.9
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 2.1e-08 63.2 50 56.0
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 2.8e-08 62.8 63 50.8
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 2.8e-08 62.8 50 60.0
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 3.6e-08 62.4 50 54.0
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 3.6e-08 62.4 50 56.0
SEGI_16950 Sequoiadendron giganteum HOM05D002509 ORTHO05D000001 4.7e-08 62.0 79 49.4
SEGI_40487 Sequoiadendron giganteum HOM05D000002 ORTHO05D015595 4.7e-08 62.0 91 42.9
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 4.7e-08 62.0 106 38.7
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 6.2e-08 61.6 113 38.1
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 6.2e-08 61.6 50 54.0
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 6.2e-08 61.6 57 49.1
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 8.1e-08 61.2 114 36.0
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 8.1e-08 61.2 50 56.0
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 1.1e-07 60.8 68 42.6
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 1.1e-07 60.8 51 56.9
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.1e-07 60.8 95 42.1
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 1.1e-07 60.8 110 38.2
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 1.1e-07 60.8 56 48.2
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 1.1e-07 60.8 113 38.9
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 1.1e-07 60.8 50 56.0
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 1.4e-07 60.5 108 37.0
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 1.4e-07 60.5 50 58.0
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 1.4e-07 60.5 114 37.7
SEGI_19682 Sequoiadendron giganteum HOM05D000422 ORTHO05D002369 1.4e-07 60.5 82 45.1
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 1.8e-07 60.1 114 38.6
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 1.8e-07 60.1 109 36.7
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 1.8e-07 60.1 109 36.7
SEGI_39922 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 1.8e-07 60.1 82 47.6
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 2.3e-07 59.7 52 50.0
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.3e-07 59.7 52 50.0
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.3e-07 59.7 52 50.0
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.3e-07 59.7 113 36.3
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 3.1e-07 59.3 51 52.9
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 3.1e-07 59.3 50 52.0
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 3.1e-07 59.3 51 54.9
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 3.1e-07 59.3 50 52.0
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 4.0e-07 58.9 57 47.4
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 4.0e-07 58.9 50 52.0
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 4.0e-07 58.9 51 51.0
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 4.0e-07 58.9 55 47.3
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 5.2e-07 58.5 57 47.4
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 5.2e-07 58.5 50 52.0
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 5.2e-07 58.5 50 54.0
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 5.2e-07 58.5 50 50.0
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 6.8e-07 58.2 50 50.0
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 6.8e-07 58.2 49 53.1
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 6.8e-07 58.2 44 59.1
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 8.9e-07 57.8 57 45.6
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 8.9e-07 57.8 59 44.1
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 8.9e-07 57.8 52 48.1
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 8.9e-07 57.8 57 45.6
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 8.9e-07 57.8 50 50.0
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 8.9e-07 57.8 52 50.0
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.2e-06 57.4 51 51.0
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.2e-06 57.4 51 51.0
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 1.2e-06 57.4 51 49.0
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.5e-06 57.0 46 56.5
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.5e-06 57.0 44 54.5
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.5e-06 57.0 95 42.1
SEGI_15004 Sequoiadendron giganteum HOM05D001035 ORTHO05D001045 2.0e-06 56.6 72 50.0
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.0e-06 56.6 50 48.0
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 2.6e-06 56.2 57 45.6
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 3.4e-06 55.8 44 54.5
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 3.4e-06 55.8 48 47.9
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 4.4e-06 55.5 50 46.0
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 4.4e-06 55.5 47 51.1
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 5.8e-06 55.1 50 52.0
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 5.8e-06 55.1 57 43.9
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 5.8e-06 55.1 52 48.1
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 5.8e-06 55.1 50 48.0
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 5.8e-06 55.1 50 48.0
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 5.8e-06 55.1 50 48.0
SEGI_03239 Sequoiadendron giganteum HOM05D011033 ORTHO05D385576 5.8e-06 55.1 41 63.4
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 5.8e-06 55.1 52 46.2
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 7.6e-06 54.7 48 54.2
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 7.6e-06 54.7 47 48.9
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 7.6e-06 54.7 108 36.1
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 9.9e-06 54.3 52 42.3


User provided reference genes

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