Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 6.1e-67 257.7 164 100.0
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 3.2e-31 139.0 108 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 3.0e-29 132.5 115 57.4
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 3.9e-29 132.1 105 64.8
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 1.1e-28 130.6 104 63.5
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 1.5e-28 130.2 109 62.4
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 2.5e-28 129.4 104 60.6
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 2.5e-28 129.4 106 58.5
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 3.3e-28 129.0 108 58.3
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 5.6e-28 128.3 104 62.5
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 5.6e-28 128.3 109 60.6
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 5.6e-28 128.3 109 60.6
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 7.3e-28 127.9 106 60.4
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 1.2e-27 127.1 103 62.1
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 1.6e-27 126.7 106 61.3
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 2.1e-27 126.3 103 60.2
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 2.1e-27 126.3 106 60.4
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 2.1e-27 126.3 112 61.6
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 2.8e-27 125.9 106 59.4
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 3.6e-27 125.6 106 60.4
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 4.7e-27 125.2 105 59.0
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 6.2e-27 124.8 104 62.5
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 6.2e-27 124.8 105 61.0
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 6.2e-27 124.8 105 60.0
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 6.2e-27 124.8 105 61.9
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 8.1e-27 124.4 104 62.5
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 8.1e-27 124.4 106 59.4
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 1.1e-26 124.0 163 46.6
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 1.1e-26 124.0 105 61.9
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 1.1e-26 124.0 106 57.5
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 1.4e-26 123.6 105 61.0
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 1.4e-26 123.6 105 61.0
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 1.4e-26 123.6 105 61.0
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 1.8e-26 123.2 104 60.6
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.3e-26 122.9 104 60.6
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 3.1e-26 122.5 106 59.4
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 3.1e-26 122.5 108 56.5
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 3.1e-26 122.5 105 59.0
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 4.0e-26 122.1 102 62.7
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 4.0e-26 122.1 105 61.0
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 4.0e-26 122.1 159 47.2
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 5.2e-26 121.7 105 58.1
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 5.2e-26 121.7 107 57.0
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 5.2e-26 121.7 104 60.6
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 6.8e-26 121.3 105 56.2
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 6.8e-26 121.3 104 60.6
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 6.8e-26 121.3 104 60.6
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 8.9e-26 120.9 104 59.6
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 1.2e-25 120.6 105 56.2
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.2e-25 120.6 100 63.0
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.2e-25 120.6 100 63.0
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.2e-25 120.6 100 63.0
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.2e-25 120.6 108 56.5
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.2e-25 120.6 106 56.6
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 1.2e-25 120.6 105 57.1
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 1.5e-25 120.2 105 59.0
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 1.5e-25 120.2 102 60.8
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 2.0e-25 119.8 154 44.8
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 2.0e-25 119.8 104 58.7
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 2.0e-25 119.8 104 58.7
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.0e-25 119.8 104 59.6
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 2.0e-25 119.8 104 59.6
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 2.6e-25 119.4 105 58.1
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.6e-25 119.4 105 57.1
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 2.6e-25 119.4 103 60.2
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 3.4e-25 119.0 152 53.9
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 3.4e-25 119.0 105 57.1
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 3.4e-25 119.0 104 57.7
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 3.4e-25 119.0 108 56.5
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 4.4e-25 118.6 105 57.1
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 4.4e-25 118.6 108 54.6
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 4.4e-25 118.6 104 58.7
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 5.8e-25 118.2 105 57.1
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 7.5e-25 117.9 105 58.1
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 7.5e-25 117.9 105 58.1
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 9.9e-25 117.5 103 58.3
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 9.9e-25 117.5 103 57.3
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 1.3e-24 117.1 109 56.0
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 1.3e-24 117.1 104 57.7
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 1.7e-24 116.7 104 58.7
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 1.7e-24 116.7 111 51.4
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 2.2e-24 116.3 105 55.2
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 2.9e-24 115.9 105 57.1
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 3.7e-24 115.5 105 56.2
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 3.7e-24 115.5 108 57.4
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 4.9e-24 115.2 94 62.8
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 4.9e-24 115.2 105 55.2
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 6.4e-24 114.8 106 54.7
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 6.4e-24 114.8 90 60.0
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 8.3e-24 114.4 164 42.1
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 1.1e-23 114.0 96 58.3
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 1.9e-23 113.2 90 58.9
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.4e-23 112.8 95 60.0
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 3.2e-23 112.5 105 54.3
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 5.4e-23 111.7 104 55.8
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 7.1e-23 111.3 104 54.8
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 3.5e-22 109.0 92 62.0
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 4.6e-22 108.6 89 60.7
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 6.0e-22 108.2 104 53.8
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.3e-21 107.1 93 59.1
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 1.3e-21 107.1 156 48.1
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 1.7e-21 106.7 103 53.4
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 2.3e-21 106.3 89 58.4
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 3.9e-21 105.5 155 52.9
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 1.9e-20 103.2 85 60.0
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 3.3e-20 102.4 110 50.9
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 4.3e-20 102.1 103 48.5
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 1.2e-19 100.5 92 57.6
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 1.5e-17 93.6 91 51.6
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 7.6e-17 91.3 95 47.4
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 2.9e-16 89.4 62 69.4
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 3.2e-07 59.3 106 31.1
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 2.1e-06 56.6 48 58.3
ClCG02G009200 Citrullus lanatus HOM05D000297 ORTHO05D000193 3.5e-06 55.8 101 31.7
MELO3C025951.2 Cucumis melo HOM05D000297 ORTHO05D000193 3.5e-06 55.8 101 31.7
CsaV3_6G009670 Cucumis sativus L. HOM05D000297 ORTHO05D000193 3.5e-06 55.8 101 31.7
ATR0827G083 Amborella trichopoda HOM05D000297 ORTHO05D000193 4.6e-06 55.5 101 31.7
HanXRQChr14g0445301 Helianthus annuus HOM05D000297 ORTHO05D000193 4.6e-06 55.5 94 31.9
Cc07_g16060 Coffea canephora HOM05D000297 ORTHO05D000193 6.0e-06 55.1 101 31.7
CANSAT56G3203 Cannabis sativa HOM05D000297 ORTHO05D000193 7.8e-06 54.7 109 33.9
Lalb_Chr17g0337751 Lupinus albus HOM05D000297 ORTHO05D000193 7.8e-06 54.7 105 31.4


User provided reference genes

Program Settings