Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 4.2e-78 294.7 152 100.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.6e-27 125.9 104 63.5
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.7e-26 123.2 103 60.2
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 8.3e-26 120.9 104 56.7
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.4e-25 120.2 104 56.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.4e-25 120.2 104 56.7
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.1e-25 118.6 104 56.7
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.1e-25 118.6 104 56.7
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 4.1e-25 118.6 104 56.7
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 4.1e-25 118.6 104 56.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 9.1e-25 117.5 104 55.8
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.2e-24 117.1 104 53.8
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.2e-24 117.1 111 55.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.6e-24 116.7 103 58.3
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.7e-24 115.9 104 55.8
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.7e-24 115.9 104 56.7
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 2.7e-24 115.9 128 50.0
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.7e-24 115.9 104 56.7
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.7e-24 115.9 104 55.8
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.7e-24 115.9 127 50.4
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 3.5e-24 115.5 104 54.8
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.5e-24 115.5 104 54.8
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.5e-24 115.5 104 56.7
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.5e-24 115.2 104 56.7
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 4.5e-24 115.2 105 53.3
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.9e-24 114.8 127 50.4
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 5.9e-24 114.8 104 53.8
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.9e-24 114.8 127 48.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 7.7e-24 114.4 128 50.8
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 7.7e-24 114.4 104 55.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 7.7e-24 114.4 101 57.4
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.0e-23 114.0 104 55.8
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.3e-23 113.6 104 54.8
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.3e-23 113.6 104 54.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.7e-23 113.2 104 55.8
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.7e-23 113.2 104 54.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.7e-23 113.2 104 54.8
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.7e-23 113.2 104 53.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 2.2e-23 112.8 104 54.8
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.2e-23 112.8 104 53.8
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.9e-23 112.5 104 54.8
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.9e-23 112.5 104 54.8
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.9e-23 112.5 104 51.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 3.8e-23 112.1 104 54.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 5.0e-23 111.7 104 55.8
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 5.0e-23 111.7 128 49.2
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 6.5e-23 111.3 104 52.9
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 6.5e-23 111.3 104 51.0
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 6.5e-23 111.3 104 53.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 6.5e-23 111.3 104 53.8
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.5e-23 111.3 104 54.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 8.5e-23 110.9 104 53.8
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 8.5e-23 110.9 104 52.9
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 8.5e-23 110.9 104 55.8
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.1e-22 110.5 104 53.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.5e-22 110.2 104 54.8
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.5e-22 110.2 104 52.9
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.5e-22 110.2 103 55.3
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.5e-22 110.2 104 51.9
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.9e-22 109.8 104 53.8
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-22 109.8 104 50.0
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.2e-22 109.0 104 52.9
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.2e-22 109.0 104 53.8
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.2e-22 109.0 104 52.9
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.2e-22 108.6 128 46.9
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 4.2e-22 108.6 104 52.9
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.2e-22 108.6 128 46.1
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 4.2e-22 108.6 128 46.1
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.2e-22 108.6 104 53.8
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.2e-22 108.6 104 53.8
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.5e-22 108.2 115 50.4
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.5e-22 108.2 104 52.9
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 7.2e-22 107.8 104 51.0
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 7.2e-22 107.8 104 53.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.5e-22 107.5 104 52.9
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 9.5e-22 107.5 111 50.5
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.6e-21 106.7 104 55.8
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.6e-21 106.7 104 52.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.1e-21 106.3 104 51.0
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.1e-21 106.3 121 48.8
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.1e-21 106.3 103 52.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.6e-21 105.5 104 52.9
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 3.6e-21 105.5 104 51.0
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.6e-21 105.5 104 49.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.6e-21 105.5 104 50.0
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 4.7e-21 105.1 111 51.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 6.1e-21 104.8 115 48.7
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.0e-20 104.0 104 52.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.0e-20 104.0 104 52.9
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.0e-20 104.0 104 50.0
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.8e-20 103.2 104 51.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.0e-20 102.1 111 50.5
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 5.2e-20 101.7 104 49.0
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.2e-20 101.7 111 49.5
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.2e-20 101.7 111 49.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.2e-20 101.7 111 49.5
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.2e-20 101.7 104 49.0
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.8e-20 101.3 111 50.5
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 8.8e-20 100.9 110 50.9
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.8e-20 100.9 133 44.4
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.2e-19 100.5 104 46.2
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 3.4e-19 99.0 102 53.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 9.8e-19 97.4 110 51.8
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.7e-18 96.7 109 46.8
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.8e-18 95.9 104 48.1
SEGI_32240 Sequoiadendron giganteum HOM05D003780 ORTHO05D004463 4.9e-18 95.1 47 93.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.4e-17 92.8 104 50.0
SEGI_16833 Sequoiadendron giganteum HOM05D002169 ORTHO05D006577 7.0e-17 91.3 51 84.3
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.9e-16 88.2 147 41.5
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.9e-15 85.9 109 46.8
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.3e-14 82.4 104 44.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.6e-13 80.1 75 53.3
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 4.9e-10 68.6 106 39.6
SEGI_28671 Sequoiadendron giganteum HOM05D000251 ORTHO05D003268 1.2e-08 63.9 36 80.6
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.3e-07 59.7 68 44.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.0e-07 59.3 116 41.4
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 7.3e-06 54.7 46 54.3


User provided reference genes

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