Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32130 Sequoiadendron giganteum HOM05D002127 ORTHO05D386935 1.6e-64 249.2 122 100.0
SEGI_34472 Sequoiadendron giganteum HOM05D002127 ORTHO05D002274 5.6e-09 64.7 62 56.5
Lj6A380T29 Lonicera japonica HOM05D002127 ORTHO05D002274 8.1e-08 60.8 37 75.7
Lju912A1T32 Lonicera japonica HOM05D002127 ORTHO05D002274 8.1e-08 60.8 37 75.7
Lj9A473T56 Lonicera japonica HOM05D002127 ORTHO05D002274 2.4e-07 59.3 37 73.0
SEGI_27892 Sequoiadendron giganteum HOM05D002127 ORTHO05D002274 2.4e-07 59.3 62 50.0
PSO063G6269 Papaver somniferum HOM05D002127 ORTHO05D002274 3.1e-07 58.9 37 73.0
HanXRQChr15g0485791 Helianthus annuus HOM05D002127 ORTHO05D002274 4.0e-07 58.5 35 77.1
Lsat_1_v5_gn_6_59101 Lactuca sativa HOM05D002127 ORTHO05D002274 4.0e-07 58.5 35 77.1
SEGI_12597 Sequoiadendron giganteum HOM05D002127 ORTHO05D002274 4.0e-07 58.5 62 53.2
SGA_v2.0_scaffold270G46302 Striga asiatica HOM05D002127 ORTHO05D002274 4.0e-07 58.5 37 70.3
Lsat_1_v5_gn_2_47620 Lactuca sativa HOM05D002127 ORTHO05D002274 6.9e-07 57.8 35 74.3
BcaC06g35574 Brassica carinata HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
A07p08560 Brassica napus HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
C07p13370 Brassica napus HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
BolC7t41832H Brassica oleracea HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
BraA07t28645Z Brassica rapa HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
PSO782G3253 Papaver somniferum HOM05D002127 ORTHO05D002274 9.0e-07 57.4 37 70.3
BcaB04g20420 Brassica carinata HOM05D002127 ORTHO05D002274 1.2e-06 57.0 37 70.3
A01p31260 Brassica napus HOM05D002127 ORTHO05D002274 1.2e-06 57.0 37 70.3
C01p39830 Brassica napus HOM05D002127 ORTHO05D002274 1.2e-06 57.0 37 70.3
BraA01t03250Z Brassica rapa HOM05D002127 ORTHO05D002274 1.2e-06 57.0 37 70.3
ECA248G2204 Erigeron canadensis HOM05D002127 ORTHO05D002274 1.2e-06 57.0 35 74.3
HanXRQChr07g0185591 Helianthus annuus HOM05D002127 ORTHO05D002274 1.2e-06 57.0 35 74.3
SalBow8G4034 Salvia bowleyana HOM05D002127 ORTHO05D002274 1.2e-06 57.0 35 74.3
ATR0561G223 Amborella trichopoda HOM05D002127 ORTHO05D002274 1.5e-06 56.6 37 67.6
ECA238G0543 Erigeron canadensis HOM05D002127 ORTHO05D002274 1.5e-06 56.6 35 74.3
HanXRQChr01g0022151 Helianthus annuus HOM05D002127 ORTHO05D002274 1.5e-06 56.6 35 74.3
Lsat_1_v5_gn_1_70780 Lactuca sativa HOM05D002127 ORTHO05D002274 1.5e-06 56.6 35 74.3
PSO017G1481 Papaver somniferum HOM05D002127 ORTHO05D002274 1.5e-06 56.6 37 70.3
PSO063G3140 Papaver somniferum HOM05D002127 ORTHO05D002274 1.5e-06 56.6 37 70.3
SEGI_02067 Sequoiadendron giganteum HOM05D002127 ORTHO05D002274 1.5e-06 56.6 62 51.6
BcaB06g26543 Brassica carinata HOM05D002127 ORTHO05D002274 2.0e-06 56.2 37 70.3
Thhalv10002505m.g Eutrema salsugineum HOM05D002127 ORTHO05D002274 2.0e-06 56.2 37 70.3
Aqoxy3G01357 Aquilegia oxysepala HOM05D002127 ORTHO05D002274 2.6e-06 55.8 62 50.0
EL10Ac3g07452 Beta vulgaris HOM05D002127 ORTHO05D002274 2.6e-06 55.8 35 74.3
BcaC01g03364 Brassica carinata HOM05D002127 ORTHO05D002274 2.6e-06 55.8 37 67.6
A03p43370 Brassica napus HOM05D002127 ORTHO05D002274 2.6e-06 55.8 37 67.6
C03p53290 Brassica napus HOM05D002127 ORTHO05D002274 2.6e-06 55.8 37 67.6
BolC3t17590H Brassica oleracea HOM05D002127 ORTHO05D002274 2.6e-06 55.8 37 67.6
BraA03t13475Z Brassica rapa HOM05D002127 ORTHO05D002274 2.6e-06 55.8 37 67.6
AUR62018554 Chenopodium quinoa HOM05D002127 ORTHO05D002274 2.6e-06 55.8 51 54.9
AUR62020865 Chenopodium quinoa HOM05D002127 ORTHO05D002274 2.6e-06 55.8 51 54.9
DCAR_026653 Daucus carota HOM05D002127 ORTHO05D002274 2.6e-06 55.8 62 46.8
Nn2g10505 Nelumbo nucifera HOM05D002127 ORTHO05D002274 2.6e-06 55.8 35 71.4
Nn4g25631 Nelumbo nucifera HOM05D002127 ORTHO05D002274 2.6e-06 55.8 35 71.4
Aa31LG9G3630 Aethionema arabicum HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
Ah.04g149430 Amaranthus hybridus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 35 71.4
AL7G42570 Arabidopsis lyrata HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
AT4G13940 Arabidopsis thaliana HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BcaC02g09378 Brassica carinata HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BcaC07g37317 Brassica carinata HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
A04p08190 Brassica napus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
A08p06520 Brassica napus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
C04p41910 Brassica napus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
C08p07560 Brassica napus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BolC4t25781H Brassica oleracea HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BolC8t47600H Brassica oleracea HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BraA04t16510Z Brassica rapa HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
BraA08t32665Z Brassica rapa HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
Carub.0007s2853 Capsella rubella HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
CARHR219830 Cardamine hirsuta HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
Lj4g0004092 Lotus japonicus HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
MBI07_g24020_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D002274 3.4e-06 55.5 35 71.4
MBI11_g07404_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D002274 3.4e-06 55.5 35 74.3
Nitab4.5_0019528g0010 Nicotiana tabacum HOM05D002127 ORTHO05D002274 3.4e-06 55.5 61 50.8
Peaxi162Scf00089g00930 Petunia axillaris HOM05D002127 ORTHO05D002274 3.4e-06 55.5 35 71.4
Sp7g11740 Schrenkiella parvula HOM05D002127 ORTHO05D002274 3.4e-06 55.5 37 67.6
Migut.G00773 Erythranthe guttata HOM05D002127 ORTHO05D002274 4.5e-06 55.1 35 71.4
Eucgr.D00281 Eucalyptus grandis HOM05D002127 ORTHO05D002274 4.5e-06 55.1 35 71.4
Nitab4.5_0002260g0040 Nicotiana tabacum HOM05D002127 ORTHO05D002274 4.5e-06 55.1 62 50.0
Sp3g21520 Schrenkiella parvula HOM05D002127 ORTHO05D002274 4.5e-06 55.1 37 67.6
Sopen09g035290 Solanum pennellii HOM05D002127 ORTHO05D002274 4.5e-06 55.1 35 74.3
CSS0009676 Camellia sinensis var. sinensis HOM05D002127 ORTHO05D002274 5.8e-06 54.7 62 48.4
CSS0038197 Camellia sinensis var. sinensis HOM05D002127 ORTHO05D002274 5.8e-06 54.7 62 48.4
Nn1g08165 Nelumbo nucifera HOM05D002127 ORTHO05D002274 5.8e-06 54.7 35 71.4
Solyc09g092380.3 Solanum lycopersicum HOM05D002127 ORTHO05D002274 5.8e-06 54.7 35 71.4
Solyc12g098500.2 Solanum lycopersicum HOM05D002127 ORTHO05D002274 5.8e-06 54.7 35 71.4
Sopen09g035280 Solanum pennellii HOM05D002127 ORTHO05D002274 5.8e-06 54.7 35 71.4
Sopen12g033280 Solanum pennellii HOM05D002127 ORTHO05D002274 5.8e-06 54.7 35 71.4
CDE02G4145 Ceratophyllum demersum HOM05D002127 ORTHO05D002274 7.6e-06 54.3 35 68.6
CDE06G0917 Ceratophyllum demersum HOM05D002127 ORTHO05D002274 7.6e-06 54.3 35 68.6
Oeu044603.1 Olea europaea HOM05D002127 ORTHO05D002274 7.6e-06 54.3 35 68.6
SGA_v2.0_scaffold19G08789 Striga asiatica HOM05D002127 ORTHO05D002274 7.6e-06 54.3 35 68.6
vmacro15568 Vaccinium macrocarpon HOM05D002127 ORTHO05D002274 7.6e-06 54.3 35 71.4
Ah.13g077940 Amaranthus hybridus HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
arahy.Tifrunner.gnm1.ann1.L1AD9S Arachis hypogaea HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
arahy.Tifrunner.gnm1.ann1.U846X0 Arachis hypogaea HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
BcaB04g17636 Brassica carinata HOM05D002127 ORTHO05D002274 1.0e-05 53.9 37 64.9
Cc04_g10710 Coffea canephora HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
Dinv27198 Davidia involucrata HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
Dinv38166 Davidia involucrata HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
Migut.G00774 Erythranthe guttata HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
Oeu043436.1 Olea europaea HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
Oeu056424.3 Olea europaea HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 68.6
PGSC0003DMG400004572 Solanum tuberosum HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 71.4
TAR374G0568 Trochodendron aralioides HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 71.4
TAR633G2573 Trochodendron aralioides HOM05D002127 ORTHO05D002274 1.0e-05 53.9 35 71.4


User provided reference genes

Program Settings